RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 FAM72CH0Y354 149 aa10.65□□□□□ -0.7
CARMIL3-202ENST00000559694 KATNA1O75449 491 aa10.65□□□□□ -0.7
CARMIL3-202ENST00000559694 SEC24AO95486 1093 aa10.65□□□□□ -0.7
CARMIL3-202ENST00000559694 PRKCGP05129 697 aa10.65□□□□□ -0.7
CARMIL3-202ENST00000559694 MPOP05164 745 aa10.65□□□□□ -0.7
CARMIL3-202ENST00000559694 EPB42P16452 691 aa10.65□□□□□ -0.7
CARMIL3-202ENST00000559694 DGKAP23743 735 aa10.65□□□□□ -0.7
CARMIL3-202ENST00000559694 RAP1GDS1P52306 607 aa10.65□□□□□ -0.7
CARMIL3-202ENST00000559694 CRY1Q16526 586 aa10.65□□□□□ -0.7
CARMIL3-202ENST00000559694 CARD16Q5EG05 197 aa10.65□□□□□ -0.7
CARMIL3-202ENST00000559694 FAM72AQ5TYM5 149 aa10.65□□□□□ -0.7
CARMIL3-202ENST00000559694 FAM72DQ6L9T8 149 aa10.65□□□□□ -0.7
CARMIL3-202ENST00000559694 BNC2Q6ZN30 1099 aaPredicted RBP10.65□□□□□ -0.7
CARMIL3-202ENST00000559694 ZCCHC23Q6ZST2 131 aa10.65□□□□□ -0.7
CARMIL3-202ENST00000559694 LDB1Q86U70 411 aaPredicted RBP10.65□□□□□ -0.7
CARMIL3-202ENST00000559694 FAM72BQ86X60 149 aa10.65□□□□□ -0.7
CARMIL3-202ENST00000559694 HDDC3Q8N4P3 179 aa10.65□□□□□ -0.7
CARMIL3-202ENST00000559694 SIPA1Q96FS4 1042 aa10.65□□□□□ -0.7
CARMIL3-202ENST00000559694 PAIP1Q9H074 479 aaKnown RBP10.65□□□□□ -0.7
CARMIL3-202ENST00000559694 FOCADQ5VW36 1801 aa10.65□□□□□ -0.7
CARMIL3-202ENST00000559694 METTL18O95568 372 aa10.65□□□□□ -0.71
CARMIL3-202ENST00000559694 ALADP13716 330 aa10.65□□□□□ -0.71
CARMIL3-202ENST00000559694 SLC25A3Q00325 362 aa10.65□□□□□ -0.71
CARMIL3-202ENST00000559694 RING1Q06587 406 aa10.65□□□□□ -0.71
CARMIL3-202ENST00000559694 ARSIQ5FYB1 569 aa10.65□□□□□ -0.71
CARMIL3-202ENST00000559694 SLC41A1Q8IVJ1 513 aa10.65□□□□□ -0.71
CARMIL3-202ENST00000559694 RNF148Q8N7C7 305 aa10.65□□□□□ -0.71
CARMIL3-202ENST00000559694 SLC35B2Q8TB61 432 aa10.65□□□□□ -0.71
CARMIL3-202ENST00000559694 ACOX2Q99424 681 aa10.65□□□□□ -0.71
CARMIL3-202ENST00000559694 TMEM109Q9BVC6 243 aa10.65□□□□□ -0.71
CARMIL3-202ENST00000559694 SPHK2Q9NRA0 654 aa10.65□□□□□ -0.71
CARMIL3-202ENST00000559694 PHPT1Q9NRX4 125 aaPredicted RBP10.65□□□□□ -0.71
CARMIL3-202ENST00000559694 LIMD1Q9UGP4 676 aa10.65□□□□□ -0.71
CARMIL3-202ENST00000559694 MFHAS1Q9Y4C4 1052 aa10.65□□□□□ -0.71
CARMIL3-202ENST00000559694 A0A0D9SEW6 157 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 GLYATL1P3A0A0U1RQE8 302 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 SMIM31A0A1B0GVY4 71 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 A0A1W2PPM1 405 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 HLA-EP13747 358 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 SOX11P35716 441 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 CHN2P52757 468 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 PRKAA1Q13131 559 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 INPP5AQ14642 412 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 CNSTQ6PJW8 725 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 ZFRQ96KR1 1074 aaKnown RBP10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 LRRC72A6NJI9 287 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 TPSB2P20231 275 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 ABRQ12979 859 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 PDK3Q15120 406 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 TPSAB1Q15661 275 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 ANKS6Q68DC2 871 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 NET1Q7Z628 596 aaPredicted RBP10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 GPSM1Q86YR5 675 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 AHI1Q8N157 1196 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 ZMIZ2Q8NF64 920 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 OTUB2Q96DC9 234 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 SLC2A13Q96QE2 648 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 SUV39H2Q9H5I1 410 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 LYNP07948 512 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 PLEKHG6Q3KR16 790 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 RAB6CQ53S08 254 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 ESRP1Q6NXG1 681 aaKnown RBP10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 RBFAQ8N0V3 343 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 TSTD1Q8NFU3 115 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 OR2AP1Q8NGE2 309 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 RFWD2Q8NHY2 731 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 CXorf40BQ96DE9 158 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 AHCYL2Q96HN2 611 aaKnown RBP10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 SHDQ96IW2 340 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 NECTIN4Q96NY8 510 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 RAB6CQ9H0N0 254 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 ELOVL6Q9H5J4 265 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 ALG9Q9H6U8 611 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 COG4Q9H9E3 785 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 KCNK4Q9NYG8 393 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 GNPTGQ9UJJ9 305 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 CDYLQ9Y232 598 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 AP4S1Q9Y587 144 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 LTBP1Q14766 1721 aa10.64□□□□□ -0.71
CARMIL3-202ENST00000559694 PRMT5O14744 637 aaPredicted RBP10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 RPN2P04844 631 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 HLA-DQB2P05538 268 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 MLNP12872 115 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 VAV1P15498 845 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 CLCN5P51795 746 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 NUP107P57740 925 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 RFTN1Q14699 578 aaPredicted RBP10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 SLC5A9Q2M3M2 681 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 LIN52Q52LA3 116 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 FNBP1LQ5T0N5 605 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 EFL1Q7Z2Z2 1120 aaKnown RBP10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 OR52K2Q8NGK3 314 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 CCDC3Q9BQI4 270 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 ACSS3Q9H6R3 686 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 EFCAB1Q9HAE3 211 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 DDX28Q9NUL7 540 aaKnown RBP10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 TBC1D30Q9Y2I9 924 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 TPP1O14773 563 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 ANGPT2O15123 496 aa10.63□□□□□ -0.71
CARMIL3-202ENST00000559694 SCAMP1O15126 338 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms