RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 BOCQ9BWV1 1114 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 TMEM168Q9H0V1 697 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 SLC25A51Q9H1U9 297 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 DPEP2Q9H4A9 486 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 GLOD4Q9HC38 313 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 TRIM10Q9UDY6 481 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 RSPH14Q9UHP6 348 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 AMFRQ9UKV5 643 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 PADI4Q9UM07 663 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 SHOC2Q9UQ13 582 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 PCDHA3Q9Y5H8 950 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 DGKBQ9Y6T7 804 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 EPG5Q9HCE0 2579 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 LY6G6EA0A0G2JKS1 128 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 GRID2IPA4D2P6 1211 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 EME2A4GXA9 379 aaPredicted RBP8.16□□□□□ -1.1
SNX1-207ENST00000559401 BTNL10A8MVZ5 291 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 HACD1B0YJ81 288 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 APOC4-APOC2K7ER74 178 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 PJA2O43164 708 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 FTCDO95954 541 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 APOC2P02655 101 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 PYGLP06737 847 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 HOXC4P09017 264 aaPredicted RBP8.16□□□□□ -1.1
SNX1-207ENST00000559401 POLD2P49005 469 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 COPS2P61201 443 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 OTUD4Q01804 1114 aaKnown RBP8.16□□□□□ -1.1
SNX1-207ENST00000559401 PTSQ03393 145 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 CDK18Q07002 472 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 DPTQ07507 201 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 ILF3Q12906 894 aaKnown RBP eCLIP8.16□□□□□ -1.1
SNX1-207ENST00000559401 BIRC2Q13490 618 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 TAZQ16635 292 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 PERM1Q5SV97 790 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 ALS2CLQ60I27 953 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 LVRNQ6Q4G3 990 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 ADAMTSL4Q6UY14 1074 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 ZNF765Q7L2R6 523 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 TECPR1Q7Z6L1 1165 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 PROSER1Q86XN7 944 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 TMEM139Q8IV31 216 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 SYCE1Q8N0S2 351 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 SDR16C5Q8N3Y7 309 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 UBL4BQ8N7F7 174 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 IPMKQ8NFU5 416 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 CCL4L1Q8NHW4 92 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 HTR3CQ8WXA8 447 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 HIC2Q96JB3 615 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 TEKT5Q96M29 485 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 FAM118BQ9BPY3 351 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 CCDC3Q9BQI4 270 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 TEX101Q9BY14 249 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 GSDMCQ9BYG8 508 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 FRMD8Q9BZ67 464 aaPredicted RBP8.16□□□□□ -1.1
SNX1-207ENST00000559401 OSBPL8Q9BZF1 889 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 GPR63Q9BZJ6 419 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 CDH19Q9H159 772 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 FAM83DQ9H4H8 585 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 C10orf88Q9H8K7 445 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 ZFYVE1Q9HBF4 777 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 SUFUQ9UMX1 484 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 PACSIN2Q9UNF0 486 aaPredicted RBP8.16□□□□□ -1.1
SNX1-207ENST00000559401 USP24Q9UPU5 2620 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 TMEM98Q9Y2Y6 226 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 ZNF711Q9Y462 761 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 GPSM3Q9Y4H4 160 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 U3KQA8 63 aa8.16□□□□□ -1.1
SNX1-207ENST00000559401 A0A0U1RQJ8 604 aa8.15□□□□□ -1.1
SNX1-207ENST00000559401 GOLGA6L9A6NEM1 432 aa8.15□□□□□ -1.1
SNX1-207ENST00000559401 SRRM3A6NNA2 597 aaPredicted RBP8.15□□□□□ -1.1
SNX1-207ENST00000559401 MIF4GDA9UHW6 222 aaKnown RBP8.15□□□□□ -1.1
SNX1-207ENST00000559401 CSO75390 466 aaKnown RBP8.15□□□□□ -1.1
SNX1-207ENST00000559401 KRT37O76014 449 aa8.15□□□□□ -1.1
SNX1-207ENST00000559401 STK10O94804 968 aaKnown RBP8.15□□□□□ -1.1
SNX1-207ENST00000559401 TJP3O95049 919 aa8.15□□□□□ -1.1
SNX1-207ENST00000559401 NDST3O95803 873 aa8.15□□□□□ -1.1
SNX1-207ENST00000559401 SOD1P00441 154 aa8.15□□□□□ -1.1
SNX1-207ENST00000559401 CEACAM5P06731 702 aa8.15□□□□□ -1.1
SNX1-207ENST00000559401 TEAD1P28347 426 aa8.15□□□□□ -1.1
SNX1-207ENST00000559401 RBL1P28749 1068 aa8.15□□□□□ -1.1
SNX1-207ENST00000559401 ACTR1BP42025 376 aa8.15□□□□□ -1.1
SNX1-207ENST00000559401 SPINT3P49223 89 aa8.15□□□□□ -1.1
SNX1-207ENST00000559401 PPM1FP49593 454 aaPredicted RBP8.15□□□□□ -1.1
SNX1-207ENST00000559401 GSDMDP57764 484 aa8.15□□□□□ -1.1
SNX1-207ENST00000559401 EIF3EP60228 445 aaKnown RBP8.15□□□□□ -1.1
SNX1-207ENST00000559401 ACTR1AP61163 376 aa8.15□□□□□ -1.1
SNX1-207ENST00000559401 WASHC5Q12768 1159 aa8.15□□□□□ -1.1
SNX1-207ENST00000559401 CAMK2BQ13554 666 aa8.15□□□□□ -1.1
SNX1-207ENST00000559401 SPIDRQ14159 915 aa8.15□□□□□ -1.1
SNX1-207ENST00000559401 NOMO1Q15155 1222 aa8.15□□□□□ -1.1
SNX1-207ENST00000559401 ZNF569Q5MCW4 686 aa8.15□□□□□ -1.1
SNX1-207ENST00000559401 ITPRIPL1Q6GPH6 555 aa8.15□□□□□ -1.1
SNX1-207ENST00000559401 AADACL2Q6P093 401 aa8.15□□□□□ -1.1
SNX1-207ENST00000559401 DARS2Q6PI48 645 aaKnown RBP8.15□□□□□ -1.1
SNX1-207ENST00000559401 FOXR1Q6PIV2 292 aa8.15□□□□□ -1.1
SNX1-207ENST00000559401 SLC30A9Q6PML9 568 aa8.15□□□□□ -1.1
SNX1-207ENST00000559401 RBM44Q6ZP01 1051 aaKnown RBP8.15□□□□□ -1.1
SNX1-207ENST00000559401 GALNT13Q8IUC8 556 aa8.15□□□□□ -1.1
SNX1-207ENST00000559401 CDKL3Q8IVW4 592 aaPredicted RBP8.15□□□□□ -1.1
SNX1-207ENST00000559401 NRSN1Q8IZ57 195 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms