RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 BRD8Q9H0E9 1235 aa17.7■□□□□ 0.42
TPM1-218ENST00000559281 DDX56Q9NY93 547 aaKnown RBP17.7■□□□□ 0.42
TPM1-218ENST00000559281 CD84Q9UIB8 345 aa17.7■□□□□ 0.42
TPM1-218ENST00000559281 A0A1W2PQM1 296 aa17.69■□□□□ 0.42
TPM1-218ENST00000559281 D6RAR5 112 aa17.69■□□□□ 0.42
TPM1-218ENST00000559281 KCNK1O00180 336 aa17.69■□□□□ 0.42
TPM1-218ENST00000559281 PPP1R12AO14974 1030 aaPredicted RBP17.69■□□□□ 0.42
TPM1-218ENST00000559281 TNFSF15O95150 251 aa17.69■□□□□ 0.42
TPM1-218ENST00000559281 PRLP01236 227 aa17.69■□□□□ 0.42
TPM1-218ENST00000559281 STC1P52823 247 aa17.69■□□□□ 0.42
TPM1-218ENST00000559281 IFI35P80217 286 aaPredicted RBP17.69■□□□□ 0.42
TPM1-218ENST00000559281 NIPAL4Q0D2K0 466 aa17.69■□□□□ 0.42
TPM1-218ENST00000559281 AP1B1Q10567 949 aa17.69■□□□□ 0.42
TPM1-218ENST00000559281 SLC9A4Q6AI14 798 aa17.69■□□□□ 0.42
TPM1-218ENST00000559281 BZW1Q7L1Q6 419 aaKnown RBP17.69■□□□□ 0.42
TPM1-218ENST00000559281 GPR155Q7Z3F1 870 aa17.69■□□□□ 0.42
TPM1-218ENST00000559281 RHOT1Q8IXI2 618 aa17.69■□□□□ 0.42
TPM1-218ENST00000559281 FBXO39Q8N4B4 442 aa17.69■□□□□ 0.42
TPM1-218ENST00000559281 LPCAT1Q8NF37 534 aa17.69■□□□□ 0.42
TPM1-218ENST00000559281 ZDHHC1Q8WTX9 485 aa17.69■□□□□ 0.42
TPM1-218ENST00000559281 SCAMP4Q969E2 229 aa17.69■□□□□ 0.42
TPM1-218ENST00000559281 FCRL3Q96P31 734 aaPredicted RBP17.69■□□□□ 0.42
TPM1-218ENST00000559281 LYSMD1Q96S90 227 aa17.69■□□□□ 0.42
TPM1-218ENST00000559281 MLPHQ9BV36 600 aaPredicted RBP17.69■□□□□ 0.42
TPM1-218ENST00000559281 CDH19Q9H159 772 aa17.69■□□□□ 0.42
TPM1-218ENST00000559281 EPB41L5Q9HCM4 733 aa17.69■□□□□ 0.42
TPM1-218ENST00000559281 SPATS2LQ9NUQ6 558 aaKnown RBP17.69■□□□□ 0.42
TPM1-218ENST00000559281 TAAR2Q9P1P5 351 aa17.69■□□□□ 0.42
TPM1-218ENST00000559281 RNF215Q9Y6U7 377 aa17.69■□□□□ 0.42
TPM1-218ENST00000559281 MYLKQ15746 1914 aa17.68■□□□□ 0.42
TPM1-218ENST00000559281 RGSL1A5PLK6 1076 aa17.68■□□□□ 0.42
TPM1-218ENST00000559281 RHPN2P1A8MT19 583 aa17.68■□□□□ 0.42
TPM1-218ENST00000559281 ANKRD66B4E2M5 251 aa17.68■□□□□ 0.42
TPM1-218ENST00000559281 PLD2O14939 933 aa17.68■□□□□ 0.42
TPM1-218ENST00000559281 KLK10O43240 276 aa17.68■□□□□ 0.42
TPM1-218ENST00000559281 FUCA1P04066 466 aa17.68■□□□□ 0.42
TPM1-218ENST00000559281 KRT1P04264 644 aa17.68■□□□□ 0.42
TPM1-218ENST00000559281 FGF1P05230 155 aa17.68■□□□□ 0.42
TPM1-218ENST00000559281 ITGA2BP08514 1039 aa17.68■□□□□ 0.42
TPM1-218ENST00000559281 HOXB3P14651 431 aaPredicted RBP17.68■□□□□ 0.42
TPM1-218ENST00000559281 CCKBRP32239 447 aa17.68■□□□□ 0.42
TPM1-218ENST00000559281 ADCY8P40145 1251 aa17.68■□□□□ 0.42
TPM1-218ENST00000559281 CD86P42081 329 aa17.68■□□□□ 0.42
TPM1-218ENST00000559281 ITPR1Q14643 2758 aa17.68■□□□□ 0.42
TPM1-218ENST00000559281 TCEAL1Q15170 157 aa17.68■□□□□ 0.42
TPM1-218ENST00000559281 DOK6Q6PKX4 331 aa17.68■□□□□ 0.42
TPM1-218ENST00000559281 RAB11FIP2Q7L804 512 aa17.68■□□□□ 0.42
TPM1-218ENST00000559281 PLD5Q8N7P1 536 aa17.68■□□□□ 0.42
TPM1-218ENST00000559281 LRRN4Q8WUT4 740 aa17.68■□□□□ 0.42
TPM1-218ENST00000559281 TMEM159Q96B96 161 aa17.68■□□□□ 0.42
TPM1-218ENST00000559281 SCARF2Q96GP6 870 aaPredicted RBP17.68■□□□□ 0.42
TPM1-218ENST00000559281 PRR11Q96HE9 360 aaPredicted RBP17.68■□□□□ 0.42
TPM1-218ENST00000559281 CELSR3Q9NYQ7 3312 aa17.68■□□□□ 0.42
TPM1-218ENST00000559281 LAMA5O15230 3695 aa17.68■□□□□ 0.42
TPM1-218ENST00000559281 A0A0U1RQS6 177 aa17.67■□□□□ 0.42
TPM1-218ENST00000559281 C1orf232A0A0U1RR37 186 aa17.67■□□□□ 0.42
TPM1-218ENST00000559281 A0A1W2PNU3 283 aaPredicted RBP17.67■□□□□ 0.42
TPM1-218ENST00000559281 C3orf70A6NLC5 250 aaPredicted RBP17.67■□□□□ 0.42
TPM1-218ENST00000559281 CDRT15L2A8MXV6 281 aa17.67■□□□□ 0.42
TPM1-218ENST00000559281 CASC3O15234 703 aaKnown RBP17.67■□□□□ 0.42
TPM1-218ENST00000559281 SPOPO43791 374 aa17.67■□□□□ 0.42
TPM1-218ENST00000559281 CLDN7O95471 211 aa17.67■□□□□ 0.42
TPM1-218ENST00000559281 POLD2P49005 469 aa17.67■□□□□ 0.42
TPM1-218ENST00000559281 PDX1P52945 283 aa17.67■□□□□ 0.42
TPM1-218ENST00000559281 TMPRSS3P57727 454 aa17.67■□□□□ 0.42
TPM1-218ENST00000559281 CTBSQ01459 385 aa17.67■□□□□ 0.42
TPM1-218ENST00000559281 IHHQ14623 411 aa17.67■□□□□ 0.42
TPM1-218ENST00000559281 SLC30A9Q6PML9 568 aa17.67■□□□□ 0.42
TPM1-218ENST00000559281 RFLNAQ6ZTI6 216 aa17.67■□□□□ 0.42
TPM1-218ENST00000559281 SPRED1Q7Z699 444 aa17.67■□□□□ 0.42
TPM1-218ENST00000559281 C17orf82Q86X59 251 aaPredicted RBP17.67■□□□□ 0.42
TPM1-218ENST00000559281 NRROSQ86YC3 692 aa17.67■□□□□ 0.42
TPM1-218ENST00000559281 RFX6Q8HWS3 928 aa17.67■□□□□ 0.42
TPM1-218ENST00000559281 RNF25Q96BH1 459 aaPredicted RBP17.67■□□□□ 0.42
TPM1-218ENST00000559281 SMIM14Q96QK8 99 aa17.67■□□□□ 0.42
TPM1-218ENST00000559281 OR2M4Q96R27 311 aa17.67■□□□□ 0.42
TPM1-218ENST00000559281 RIOK2Q9BVS4 552 aaKnown RBP17.67■□□□□ 0.42
TPM1-218ENST00000559281 FOXP3Q9BZS1 431 aa17.67■□□□□ 0.42
TPM1-218ENST00000559281 TRIM5Q9C035 493 aa17.67■□□□□ 0.42
TPM1-218ENST00000559281 PKD2L2Q9NZM6 624 aa17.67■□□□□ 0.42
TPM1-218ENST00000559281 AKAP7Q9P0M2 348 aaPredicted RBP17.67■□□□□ 0.42
TPM1-218ENST00000559281 TMEM98Q9Y2Y6 226 aa17.67■□□□□ 0.42
TPM1-218ENST00000559281 TEX51A0A1B0GUA7 166 aa17.66■□□□□ 0.42
TPM1-218ENST00000559281 ASMTLO95671 621 aa17.66■□□□□ 0.42
TPM1-218ENST00000559281 SOD1P00441 154 aa17.66■□□□□ 0.42
TPM1-218ENST00000559281 JMJD7P0C870 316 aa17.66■□□□□ 0.42
TPM1-218ENST00000559281 TNNT1P13805 278 aa17.66■□□□□ 0.42
TPM1-218ENST00000559281 AK4P27144 223 aaPredicted RBP17.66■□□□□ 0.42
TPM1-218ENST00000559281 NOP2P46087 812 aaKnown RBP17.66■□□□□ 0.42
TPM1-218ENST00000559281 NR2C2P49116 596 aa17.66■□□□□ 0.42
TPM1-218ENST00000559281 CXADRP78310 365 aa17.66■□□□□ 0.42
TPM1-218ENST00000559281 SKOR1P84550 965 aa17.66■□□□□ 0.42
TPM1-218ENST00000559281 TBX2Q13207 712 aaPredicted RBP17.66■□□□□ 0.42
TPM1-218ENST00000559281 LRP8Q14114 963 aa17.66■□□□□ 0.42
TPM1-218ENST00000559281 TFDP2Q14188 446 aa17.66■□□□□ 0.42
TPM1-218ENST00000559281 CLPPQ16740 277 aaPredicted RBP17.66■□□□□ 0.42
TPM1-218ENST00000559281 QPCTQ16769 361 aa17.66■□□□□ 0.42
TPM1-218ENST00000559281 CCDC70Q6NSX1 233 aa17.66■□□□□ 0.42
TPM1-218ENST00000559281 B3GNT8Q7Z7M8 397 aa17.66■□□□□ 0.42
TPM1-218ENST00000559281 CLEC14AQ86T13 490 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms