RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 GRK6P43250 576 aa18.64■□□□□ 0.57
CASC4-209ENST00000559222 CDK3Q00526 305 aa18.64■□□□□ 0.57
CASC4-209ENST00000559222 DPTQ07507 201 aa18.64■□□□□ 0.57
CASC4-209ENST00000559222 PTPRCAPQ14761 206 aa18.64■□□□□ 0.57
CASC4-209ENST00000559222 HENMT1Q5T8I9 393 aaKnown RBP18.64■□□□□ 0.57
CASC4-209ENST00000559222 N4BP2L1Q5TBK1 243 aaPredicted RBP18.64■□□□□ 0.57
CASC4-209ENST00000559222 KCTD11Q693B1 232 aa18.64■□□□□ 0.57
CASC4-209ENST00000559222 DENND5AQ6IQ26 1287 aa18.64■□□□□ 0.57
CASC4-209ENST00000559222 TMC3Q7Z5M5 1100 aa18.64■□□□□ 0.57
CASC4-209ENST00000559222 HID1Q8IV36 788 aa18.64■□□□□ 0.57
CASC4-209ENST00000559222 BLOC1S5Q8TDH9 187 aa18.64■□□□□ 0.57
CASC4-209ENST00000559222 WDR92Q96MX6 357 aa18.64■□□□□ 0.57
CASC4-209ENST00000559222 OSBPL9Q96SU4 736 aa18.64■□□□□ 0.57
CASC4-209ENST00000559222 FERMT1Q9BQL6 677 aa18.64■□□□□ 0.57
CASC4-209ENST00000559222 TEX101Q9BY14 249 aa18.64■□□□□ 0.57
CASC4-209ENST00000559222 GPR63Q9BZJ6 419 aa18.64■□□□□ 0.57
CASC4-209ENST00000559222 CLPBQ9H078 707 aa18.64■□□□□ 0.57
CASC4-209ENST00000559222 BPIFA1Q9NP55 256 aa18.64■□□□□ 0.57
CASC4-209ENST00000559222 PIH1D1Q9NWS0 290 aaKnown RBP18.64■□□□□ 0.57
CASC4-209ENST00000559222 APOBEC3BQ9UH17 382 aaKnown RBP18.64■□□□□ 0.57
CASC4-209ENST00000559222 ZNF148Q9UQR1 794 aa18.64■□□□□ 0.57
CASC4-209ENST00000559222 INPP4BO15327 924 aa18.63■□□□□ 0.57
CASC4-209ENST00000559222 YKT6O15498 198 aa18.63■□□□□ 0.57
CASC4-209ENST00000559222 EPOP01588 193 aa18.63■□□□□ 0.57
CASC4-209ENST00000559222 CEACAM1P13688 526 aa18.63■□□□□ 0.57
CASC4-209ENST00000559222 BPIP17213 487 aa18.63■□□□□ 0.57
CASC4-209ENST00000559222 HLA-DPA1P20036 260 aa18.63■□□□□ 0.57
CASC4-209ENST00000559222 GPR1P46091 355 aa18.63■□□□□ 0.57
CASC4-209ENST00000559222 POLD2P49005 469 aa18.63■□□□□ 0.57
CASC4-209ENST00000559222 SIM1P81133 766 aaPredicted RBP18.63■□□□□ 0.57
CASC4-209ENST00000559222 MSLNQ13421 630 aaPredicted RBP18.63■□□□□ 0.57
CASC4-209ENST00000559222 PTK2BQ14289 1009 aa18.63■□□□□ 0.57
CASC4-209ENST00000559222 CCNG2Q16589 344 aa18.63■□□□□ 0.57
CASC4-209ENST00000559222 PARP6Q2NL67 630 aa18.63■□□□□ 0.57
CASC4-209ENST00000559222 TTC27Q6P3X3 843 aa18.63■□□□□ 0.57
CASC4-209ENST00000559222 RANBP10Q6VN20 620 aa18.63■□□□□ 0.57
CASC4-209ENST00000559222 ZNF765Q7L2R6 523 aa18.63■□□□□ 0.57
CASC4-209ENST00000559222 RD3Q7Z3Z2 195 aa18.63■□□□□ 0.57
CASC4-209ENST00000559222 LMX1AQ8TE12 382 aa18.63■□□□□ 0.57
CASC4-209ENST00000559222 TBL1YQ9BQ87 522 aa18.63■□□□□ 0.57
CASC4-209ENST00000559222 AP1M1Q9BXS5 423 aa18.63■□□□□ 0.57
CASC4-209ENST00000559222 FRMD8P1Q9BZ68 369 aaPredicted RBP18.63■□□□□ 0.57
CASC4-209ENST00000559222 SLC32A1Q9H598 525 aa18.63■□□□□ 0.57
CASC4-209ENST00000559222 SUDS3Q9H7L9 328 aaPredicted RBP18.63■□□□□ 0.57
CASC4-209ENST00000559222 TOR4AQ9NXH8 423 aa18.63■□□□□ 0.57
CASC4-209ENST00000559222 KLQ9UEF7 1012 aa18.63■□□□□ 0.57
CASC4-209ENST00000559222 CNOT6Q9ULM6 557 aaKnown RBP18.63■□□□□ 0.57
CASC4-209ENST00000559222 KCTD3Q9Y597 815 aa18.63■□□□□ 0.57
CASC4-209ENST00000559222 PCYT1BQ9Y5K3 369 aaPredicted RBP18.63■□□□□ 0.57
CASC4-209ENST00000559222 OAS3Q9Y6K5 1087 aaKnown RBP18.63■□□□□ 0.57
CASC4-209ENST00000559222 CACNB4O00305 520 aaPredicted RBP18.62■□□□□ 0.57
CASC4-209ENST00000559222 TOR1BO14657 336 aa18.62■□□□□ 0.57
CASC4-209ENST00000559222 GPR39O43194 453 aa18.62■□□□□ 0.57
CASC4-209ENST00000559222 TOP3BO95985 862 aaKnown RBP18.62■□□□□ 0.57
CASC4-209ENST00000559222 FGF1P05230 155 aa18.62■□□□□ 0.57
CASC4-209ENST00000559222 MYCLP1P12525 358 aaPredicted RBP18.62■□□□□ 0.57
CASC4-209ENST00000559222 CA5AP35218 305 aa18.62■□□□□ 0.57
CASC4-209ENST00000559222 SRP54P61011 504 aaKnown RBP18.62■□□□□ 0.57
CASC4-209ENST00000559222 DNAJC3Q13217 504 aa18.62■□□□□ 0.57
CASC4-209ENST00000559222 PRPSAP1Q14558 356 aa18.62■□□□□ 0.57
CASC4-209ENST00000559222 SUZ12Q15022 739 aaKnown RBP18.62■□□□□ 0.57
CASC4-209ENST00000559222 TRIP6Q15654 476 aaKnown RBP18.62■□□□□ 0.57
CASC4-209ENST00000559222 P3H1Q32P28 736 aa18.62■□□□□ 0.57
CASC4-209ENST00000559222 PRRT3Q5FWE3 981 aa18.62■□□□□ 0.57
CASC4-209ENST00000559222 CCDC70Q6NSX1 233 aa18.62■□□□□ 0.57
CASC4-209ENST00000559222 DOK6Q6PKX4 331 aa18.62■□□□□ 0.57
CASC4-209ENST00000559222 ERMP1Q7Z2K6 904 aa18.62■□□□□ 0.57
CASC4-209ENST00000559222 NRSN1Q8IZ57 195 aa18.62■□□□□ 0.57
CASC4-209ENST00000559222 PDCD7Q8N8D1 485 aaKnown RBP18.62■□□□□ 0.57
CASC4-209ENST00000559222 PBKQ96KB5 322 aa18.62■□□□□ 0.57
CASC4-209ENST00000559222 FRMD8Q9BZ67 464 aaPredicted RBP18.62■□□□□ 0.57
CASC4-209ENST00000559222 ARFGAP3Q9NP61 516 aa18.62■□□□□ 0.57
CASC4-209ENST00000559222 PKD2L2Q9NZM6 624 aa18.62■□□□□ 0.57
CASC4-209ENST00000559222 SNX12Q9UMY4 172 aa18.62■□□□□ 0.57
CASC4-209ENST00000559222 TMEM98Q9Y2Y6 226 aa18.62■□□□□ 0.57
CASC4-209ENST00000559222 SPTBN2O15020 2390 aa18.62■□□□□ 0.57
CASC4-209ENST00000559222 SIGLEC6O43699 453 aa18.61■□□□□ 0.57
CASC4-209ENST00000559222 CEACAM5P06731 702 aa18.61■□□□□ 0.57
CASC4-209ENST00000559222 RPL22P35268 128 aaKnown RBP18.61■□□□□ 0.57
CASC4-209ENST00000559222 HK3P52790 923 aa18.61■□□□□ 0.57
CASC4-209ENST00000559222 GNG11P61952 73 aa18.61■□□□□ 0.57
CASC4-209ENST00000559222 HNRNPKP61978 463 aaKnown RBP eCLIP18.61■□□□□ 0.57
CASC4-209ENST00000559222 PPARDQ03181 441 aa18.61■□□□□ 0.57
CASC4-209ENST00000559222 DEFB133Q30KQ1 61 aa18.61■□□□□ 0.57
CASC4-209ENST00000559222 ZNF648Q5T619 568 aaPredicted RBP18.61■□□□□ 0.57
CASC4-209ENST00000559222 ADAMTSL4Q6UY14 1074 aa18.61■□□□□ 0.57
CASC4-209ENST00000559222 SLCO6A1Q86UG4 719 aa18.61■□□□□ 0.57
CASC4-209ENST00000559222 PNPLA1Q8N8W4 532 aa18.61■□□□□ 0.57
CASC4-209ENST00000559222 OR56A4Q8NGH8 313 aa18.61■□□□□ 0.57
CASC4-209ENST00000559222 CCL4L1Q8NHW4 92 aa18.61■□□□□ 0.57
CASC4-209ENST00000559222 CCHCR1Q8TD31 782 aa18.61■□□□□ 0.57
CASC4-209ENST00000559222 FAM83DQ9H4H8 585 aa18.61■□□□□ 0.57
CASC4-209ENST00000559222 ETNK1Q9HBU6 452 aa18.61■□□□□ 0.57
CASC4-209ENST00000559222 PHPT1Q9NRX4 125 aaPredicted RBP18.61■□□□□ 0.57
CASC4-209ENST00000559222 TMPRSS11EQ9UL52 423 aa18.61■□□□□ 0.57
CASC4-209ENST00000559222 AAR2Q9Y312 384 aaKnown RBP18.61■□□□□ 0.57
CASC4-209ENST00000559222 ARL5AQ9Y689 179 aa18.61■□□□□ 0.57
CASC4-209ENST00000559222 LY6G6EA0A0G2JKS1 128 aa18.6■□□□□ 0.57
CASC4-209ENST00000559222 PRSS38A1L453 326 aa18.6■□□□□ 0.57
CASC4-209ENST00000559222 H3BM21 787 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms