RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 LRRC38Q5VT99 294 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 BRAT1Q6PJG6 821 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 LYPD4Q6UWN0 246 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 RAD9BQ6WBX8 426 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 Q6ZSR6 202 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 PTAR1Q7Z6K3 402 aaPredicted RBP6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 SLCO6A1Q86UG4 719 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 LRRC49Q8IUZ0 686 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 TMEM139Q8IV31 216 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 MAP7D3Q8IWC1 876 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 OXR1Q8N573 874 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 PLD5Q8N7P1 536 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 TP53I13Q8NBR0 393 aaPredicted RBP6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 DENND6BQ8NEG7 585 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 CXorf40AQ8TE69 158 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 HNRNPLLQ8WVV9 542 aaKnown RBP6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 CENPTQ96BT3 561 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 LENG8Q96PV6 779 aaPredicted RBP6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 RNF157Q96PX1 679 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 NUDCD1Q96RS6 583 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 NOD2Q9HC29 1040 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 DTLQ9NZJ0 730 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 ANGPTL2Q9UKU9 493 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 POLR3KQ9Y2Y1 108 aaPredicted RBP6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 COQ6Q9Y2Z9 468 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 REXO2Q9Y3B8 237 aaKnown RBP6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 PCDHA13Q9Y5I0 950 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 HS3ST3A1Q9Y663 406 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 PTPRBP23467 1997 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 A0A0A6YYK5 440 aaPredicted RBP6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 SPTY2D1-AS1A0A0U1RR47 76 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 FPGTO14772 594 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 MATN3O15232 486 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 YKT6O15498 198 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 SPOPO43791 374 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 HYAL3O43820 417 aaPredicted RBP6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 SDC3O75056 442 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 SOCS5O75159 536 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 TM7SF2O76062 418 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 NDUFA10O95299 355 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 KRT1P04264 644 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 ITGAVP06756 1048 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 ATXN1LP0C7T5 689 aaKnown RBP6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 FTH1P19P0C7X4 201 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 C6P13671 934 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 TNNT1P13805 278 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 XPAP23025 273 aaPredicted RBP6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 SLC1A1P43005 524 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 MARCKSL1P49006 195 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 TRAF2Q12933 501 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 SGCGQ13326 291 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 FZD2Q14332 565 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 INPP5AQ14642 412 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 ZFYVE27Q5T4F4 411 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 CFAP58Q5T655 872 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 MARC1Q5VT66 337 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 SLC9A4Q6AI14 798 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 ERAP2Q6P179 960 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 MFSD7Q6UXD7 560 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 VSIG1Q86XK7 387 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 RHOT1Q8IXI2 618 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 FAM169BQ8N8A8 192 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 MAML1Q92585 1016 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 FATE1Q969F0 183 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 HDAC11Q96DB2 347 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 WDR89Q96FK6 387 aaPredicted RBP6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 TSGA13Q96PP4 275 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 CDC6Q99741 560 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 NT5MQ9NPB1 228 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 MBNL1Q9NR56 388 aaKnown RBP6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 UCKL1Q9NWZ5 548 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 PNMA8BQ9ULN7 279 aaPredicted RBP6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 ALG6Q9Y672 507 aa6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 EPN1Q9Y6I3 576 aaPredicted RBP6.05□□□□□ -1.44
CTDSPL2-204ENST00000558966 LRP4O75096 1905 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 APC2O95996 2303 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 PLXNB3Q9ULL4 1909 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 APOL1O14791 398 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 TNFSF14O43557 240 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 PSTPIP1O43586 416 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 PIAS2O75928 621 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 CPP00450 1065 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 HLA-DQB2P05538 268 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 CELA2BP08218 269 aaPredicted RBP6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 GIMD1P0DJR0 217 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 NID1P14543 1247 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 GM2AP17900 193 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 DGKAP23743 735 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 CCNCP24863 283 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 GMPRP36959 345 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 NOP2P46087 812 aaKnown RBP6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 RABIFP47224 123 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 DSC2Q02487 901 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 ZBTB17Q13105 803 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 EIF2B5Q13144 721 aaKnown RBP6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 PDE1CQ14123 709 aaPredicted RBP6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 PTPRRQ15256 657 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 IRF4Q15306 451 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 SPA17Q15506 151 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms