RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 PDE2AO00408 941 aaPredicted RBP12.31□□□□□ -0.44
SMAD3-205ENST00000558428 GIPC1O14908 333 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 AURKAO14965 403 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 USP12O75317 370 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 PIAS2O75928 621 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 PYGLP06737 847 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 HOXC4P09017 264 aaPredicted RBP12.31□□□□□ -0.44
SMAD3-205ENST00000558428 MYCLP1P12525 358 aaPredicted RBP12.31□□□□□ -0.44
SMAD3-205ENST00000558428 CEACAM1P13688 526 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 ETS1P14921 441 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 KELP23276 732 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 DGKAP23743 735 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 TEAD1P28347 426 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 FDFT1P37268 417 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 KCNJ1P48048 391 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 CDK3Q00526 305 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 RANBP10Q6VN20 620 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 GSTA5Q7RTV2 222 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 KANSL1Q7Z3B3 1105 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 RD3Q7Z3Z2 195 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 GLT6D1Q7Z4J2 308 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 PRUNE1Q86TP1 453 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 NLRP8Q86W28 1048 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 HID1Q8IV36 788 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 KLHDC8BQ8IXV7 354 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 RBFAQ8N0V3 343 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 PDCD7Q8N8D1 485 aaKnown RBP12.31□□□□□ -0.44
SMAD3-205ENST00000558428 PRELID2Q8N945 189 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 OR56A4Q8NGH8 313 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 ACTRT1Q8TDG2 376 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 BTN2A2Q8WVV5 523 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 TSACCQ96A04 125 aaPredicted RBP12.31□□□□□ -0.44
SMAD3-205ENST00000558428 WDR24Q96S15 920 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 AGAP2Q99490 1192 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 LGR4Q9BXB1 951 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 AP1M1Q9BXS5 423 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 TEX101Q9BY14 249 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 SLC13A1Q9BZW2 595 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 TCEAL2Q9H3H9 227 aaPredicted RBP12.31□□□□□ -0.44
SMAD3-205ENST00000558428 TRABDQ9H4I3 376 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 LRRC40Q9H9A6 602 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 BPIFA1Q9NP55 256 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 RAD18Q9NS91 495 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 UCKL1Q9NWZ5 548 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 SMARCAL1Q9NZC9 954 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 HACD3Q9P035 362 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 PAK5Q9P286 719 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 APOBEC3BQ9UH17 382 aaKnown RBP12.31□□□□□ -0.44
SMAD3-205ENST00000558428 MOSPD1Q9UJG1 213 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 SPEGQ15772 3267 aa12.3□□□□□ -0.44
SMAD3-205ENST00000558428 TMEM202A6NGA9 273 aa12.3□□□□□ -0.44
SMAD3-205ENST00000558428 CES2O00748 559 aa12.3□□□□□ -0.44
SMAD3-205ENST00000558428 ZNF185O15231 689 aa12.3□□□□□ -0.44
SMAD3-205ENST00000558428 FFAR2O15552 330 aa12.3□□□□□ -0.44
SMAD3-205ENST00000558428 PSMD3O43242 534 aa12.3□□□□□ -0.44
SMAD3-205ENST00000558428 CBFA2T3O75081 653 aa12.3□□□□□ -0.44
SMAD3-205ENST00000558428 RASGRP1O95267 797 aa12.3□□□□□ -0.44
SMAD3-205ENST00000558428 AP2A1O95782 977 aa12.3□□□□□ -0.44
SMAD3-205ENST00000558428 SOD1P00441 154 aa12.3□□□□□ -0.44
SMAD3-205ENST00000558428 ZSCAN5DPP0CG00 497 aa12.3□□□□□ -0.44
SMAD3-205ENST00000558428 TCP1P17987 556 aaKnown RBP12.3□□□□□ -0.44
SMAD3-205ENST00000558428 HMGCLP35914 325 aa12.3□□□□□ -0.44
SMAD3-205ENST00000558428 BLKP51451 505 aa12.3□□□□□ -0.44
SMAD3-205ENST00000558428 HK3P52790 923 aa12.3□□□□□ -0.44
SMAD3-205ENST00000558428 DCDC1P59894 354 aa12.3□□□□□ -0.44
SMAD3-205ENST00000558428 SRP54P61011 504 aaKnown RBP12.3□□□□□ -0.44
SMAD3-205ENST00000558428 TRIP6Q15654 476 aaKnown RBP12.3□□□□□ -0.44
SMAD3-205ENST00000558428 ALG11Q2TAA5 492 aa12.3□□□□□ -0.44
SMAD3-205ENST00000558428 PRRT3Q5FWE3 981 aa12.3□□□□□ -0.44
SMAD3-205ENST00000558428 HENMT1Q5T8I9 393 aaKnown RBP12.3□□□□□ -0.44
SMAD3-205ENST00000558428 ALS2CLQ60I27 953 aa12.3□□□□□ -0.44
SMAD3-205ENST00000558428 KCTD11Q693B1 232 aa12.3□□□□□ -0.44
SMAD3-205ENST00000558428 ADAMTSL4Q6UY14 1074 aa12.3□□□□□ -0.44
SMAD3-205ENST00000558428 NYAP1Q6ZVC0 841 aa12.3□□□□□ -0.44
SMAD3-205ENST00000558428 C17orf53Q8N3J3 647 aaPredicted RBP12.3□□□□□ -0.44
SMAD3-205ENST00000558428 TTC30BQ8N4P2 665 aa12.3□□□□□ -0.44
SMAD3-205ENST00000558428 EID2Q8N6I1 236 aa12.3□□□□□ -0.44
SMAD3-205ENST00000558428 GLIS1Q8NBF1 620 aa12.3□□□□□ -0.44
SMAD3-205ENST00000558428 GPR26Q8NDV2 337 aa12.3□□□□□ -0.44
SMAD3-205ENST00000558428 ZNF548Q8NEK5 533 aaPredicted RBP12.3□□□□□ -0.44
SMAD3-205ENST00000558428 LMX1AQ8TE12 382 aa12.3□□□□□ -0.44
SMAD3-205ENST00000558428 MAGOHBQ96A72 148 aaKnown RBP12.3□□□□□ -0.44
SMAD3-205ENST00000558428 PDXPQ96GD0 296 aa12.3□□□□□ -0.44
SMAD3-205ENST00000558428 NAPGQ99747 312 aaPredicted RBP12.3□□□□□ -0.44
SMAD3-205ENST00000558428 SPATA16Q9BXB7 569 aa12.3□□□□□ -0.44
SMAD3-205ENST00000558428 CDH19Q9H159 772 aa12.3□□□□□ -0.44
SMAD3-205ENST00000558428 ETNK1Q9HBU6 452 aa12.3□□□□□ -0.44
SMAD3-205ENST00000558428 FGF22Q9HCT0 170 aa12.3□□□□□ -0.44
SMAD3-205ENST00000558428 KCND1Q9NSA2 647 aa12.3□□□□□ -0.44
SMAD3-205ENST00000558428 SPASTQ9UBP0 616 aa12.3□□□□□ -0.44
SMAD3-205ENST00000558428 MYLKQ15746 1914 aa12.3□□□□□ -0.44
SMAD3-205ENST00000558428 ARHGEF17Q96PE2 2063 aaPredicted RBP12.3□□□□□ -0.44
SMAD3-205ENST00000558428 GOLGA6L10A0A0M3HER8 536 aa12.29□□□□□ -0.44
SMAD3-205ENST00000558428 SPAARA0A1B0GVQ0 90 aa12.29□□□□□ -0.44
SMAD3-205ENST00000558428 CTAGE9A4FU28 777 aa12.29□□□□□ -0.44
SMAD3-205ENST00000558428 NEMP2A6NFY4 417 aa12.29□□□□□ -0.44
SMAD3-205ENST00000558428 E7EVH7 732 aa12.29□□□□□ -0.44
SMAD3-205ENST00000558428 SCAMP1O15126 338 aa12.29□□□□□ -0.44
SMAD3-205ENST00000558428 INPP4BO15327 924 aa12.29□□□□□ -0.44
SMAD3-205ENST00000558428 AQP9O43315 295 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms