RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 GGT7Q9UJ14 662 aa16.83■□□□□ 0.28
SNX1-203ENST00000558040 ZNF180Q9UJW8 692 aa16.83■□□□□ 0.28
SNX1-203ENST00000558040 SIT1Q9Y3P8 196 aa16.83■□□□□ 0.28
SNX1-203ENST00000558040 GLYATL1P3A0A0U1RQE8 302 aa16.82■□□□□ 0.28
SNX1-203ENST00000558040 GOLGA8KD6RF30 607 aa16.82■□□□□ 0.28
SNX1-203ENST00000558040 GOLGA8TH3BQL2 631 aa16.82■□□□□ 0.28
SNX1-203ENST00000558040 AGPSO00116 658 aa16.82■□□□□ 0.28
SNX1-203ENST00000558040 PFDN6O15212 129 aa16.82■□□□□ 0.28
SNX1-203ENST00000558040 CD3EAPO15446 510 aaKnown RBP16.82■□□□□ 0.28
SNX1-203ENST00000558040 ITGALP20701 1170 aa16.82■□□□□ 0.28
SNX1-203ENST00000558040 OGNP20774 298 aaKnown RBP16.82■□□□□ 0.28
SNX1-203ENST00000558040 ATP5DP30049 168 aa16.82■□□□□ 0.28
SNX1-203ENST00000558040 GP5P40197 560 aa16.82■□□□□ 0.28
SNX1-203ENST00000558040 SERPINB9P50453 376 aa16.82■□□□□ 0.28
SNX1-203ENST00000558040 DCDC1P59894 354 aa16.82■□□□□ 0.28
SNX1-203ENST00000558040 CACNG1Q06432 222 aa16.82■□□□□ 0.28
SNX1-203ENST00000558040 ACOX1Q15067 660 aa16.82■□□□□ 0.28
SNX1-203ENST00000558040 HSP90B2PQ58FF3 399 aa16.82■□□□□ 0.28
SNX1-203ENST00000558040 LGSNQ5TDP6 509 aa16.82■□□□□ 0.28
SNX1-203ENST00000558040 HSD11B1LQ7Z5J1 315 aa16.82■□□□□ 0.28
SNX1-203ENST00000558040 NRSN1Q8IZ57 195 aa16.82■□□□□ 0.28
SNX1-203ENST00000558040 PGBD3Q8N328 593 aa16.82■□□□□ 0.28
SNX1-203ENST00000558040 SPEM1Q8N4L4 309 aa16.82■□□□□ 0.28
SNX1-203ENST00000558040 HMGB4Q8WW32 186 aa16.82■□□□□ 0.28
SNX1-203ENST00000558040 NECAB3Q96P71 396 aaPredicted RBP16.82■□□□□ 0.28
SNX1-203ENST00000558040 AGAP2Q99490 1192 aa16.82■□□□□ 0.28
SNX1-203ENST00000558040 TTC1Q99614 292 aa16.82■□□□□ 0.28
SNX1-203ENST00000558040 STMN4Q9H169 189 aaPredicted RBP16.82■□□□□ 0.28
SNX1-203ENST00000558040 SLC6A17Q9H1V8 727 aa16.82■□□□□ 0.28
SNX1-203ENST00000558040 SUDS3Q9H7L9 328 aaPredicted RBP16.82■□□□□ 0.28
SNX1-203ENST00000558040 KCTD5Q9NXV2 234 aa16.82■□□□□ 0.28
SNX1-203ENST00000558040 NFKBIL1Q9UBC1 381 aaPredicted RBP16.82■□□□□ 0.28
SNX1-203ENST00000558040 SERGEFQ9UGK8 458 aa16.82■□□□□ 0.28
SNX1-203ENST00000558040 FNDC3AQ9Y2H6 1198 aaKnown RBP16.82■□□□□ 0.28
SNX1-203ENST00000558040 PRUNE2Q8WUY3 3088 aa16.82■□□□□ 0.28
SNX1-203ENST00000558040 IQANK1A0A1B0GTG1 560 aa16.81■□□□□ 0.28
SNX1-203ENST00000558040 OR51F1A6NGY5 319 aa16.81■□□□□ 0.28
SNX1-203ENST00000558040 WNT9AO14904 365 aa16.81■□□□□ 0.28
SNX1-203ENST00000558040 RGS16O15492 202 aaPredicted RBP16.81■□□□□ 0.28
SNX1-203ENST00000558040 PLRG1O43660 514 aaKnown RBP16.81■□□□□ 0.28
SNX1-203ENST00000558040 LZTS3O60299 673 aaPredicted RBP16.81■□□□□ 0.28
SNX1-203ENST00000558040 PIAS1O75925 651 aa16.81■□□□□ 0.28
SNX1-203ENST00000558040 SRP72O76094 671 aaKnown RBP16.81■□□□□ 0.28
SNX1-203ENST00000558040 PRAMEF1O95521 474 aa16.81■□□□□ 0.28
SNX1-203ENST00000558040 CNTFP26441 200 aa16.81■□□□□ 0.28
SNX1-203ENST00000558040 PMLP29590 882 aa16.81■□□□□ 0.28
SNX1-203ENST00000558040 FOXN2P32314 431 aa16.81■□□□□ 0.28
SNX1-203ENST00000558040 PPARGP37231 505 aaPredicted RBP16.81■□□□□ 0.28
SNX1-203ENST00000558040 CSE1LP55060 971 aaKnown RBP16.81■□□□□ 0.28
SNX1-203ENST00000558040 XIAPP98170 497 aa16.81■□□□□ 0.28
SNX1-203ENST00000558040 PEX6Q13608 980 aa16.81■□□□□ 0.28
SNX1-203ENST00000558040 GAS6Q14393 721 aa16.81■□□□□ 0.28
SNX1-203ENST00000558040 ZNF284Q2VY69 593 aa16.81■□□□□ 0.28
SNX1-203ENST00000558040 ZRANB3Q5FWF4 1079 aa16.81■□□□□ 0.28
SNX1-203ENST00000558040 GRTP1Q5TC63 336 aa16.81■□□□□ 0.28
SNX1-203ENST00000558040 ADGRD1Q6QNK2 874 aa16.81■□□□□ 0.28
SNX1-203ENST00000558040 FAM151BQ6UXP7 276 aa16.81■□□□□ 0.28
SNX1-203ENST00000558040 PACS1Q6VY07 963 aa16.81■□□□□ 0.28
SNX1-203ENST00000558040 CYP2U1Q7Z449 544 aa16.81■□□□□ 0.28
SNX1-203ENST00000558040 STRA8Q7Z7C7 330 aa16.81■□□□□ 0.28
SNX1-203ENST00000558040 GALNT7Q86SF2 657 aa16.81■□□□□ 0.28
SNX1-203ENST00000558040 CILP2Q8IUL8 1156 aa16.81■□□□□ 0.28
SNX1-203ENST00000558040 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.81■□□□□ 0.28
SNX1-203ENST00000558040 C2CD4AQ8NCU7 369 aaPredicted RBP16.81■□□□□ 0.28
SNX1-203ENST00000558040 OR14C36Q8NHC7 312 aa16.81■□□□□ 0.28
SNX1-203ENST00000558040 DCAKDQ8WVC6 231 aa16.81■□□□□ 0.28
SNX1-203ENST00000558040 EDAQ92838 391 aa16.81■□□□□ 0.28
SNX1-203ENST00000558040 KDM4CQ9H3R0 1056 aa16.81■□□□□ 0.28
SNX1-203ENST00000558040 CENPHQ9H3R5 247 aa16.81■□□□□ 0.28
SNX1-203ENST00000558040 PREBQ9HCU5 417 aa16.81■□□□□ 0.28
SNX1-203ENST00000558040 IL26Q9NPH9 171 aa16.81■□□□□ 0.28
SNX1-203ENST00000558040 LGALS13Q9UHV8 139 aa16.81■□□□□ 0.28
SNX1-203ENST00000558040 FBXO5Q9UKT4 447 aa16.81■□□□□ 0.28
SNX1-203ENST00000558040 VPS9D1Q9Y2B5 631 aa16.81■□□□□ 0.28
SNX1-203ENST00000558040 SCN8AQ9UQD0 1980 aa16.8■□□□□ 0.28
SNX1-203ENST00000558040 DCXO43602 365 aa16.8■□□□□ 0.28
SNX1-203ENST00000558040 KRT37O76014 449 aa16.8■□□□□ 0.28
SNX1-203ENST00000558040 KRT38O76015 456 aa16.8■□□□□ 0.28
SNX1-203ENST00000558040 PCDH8O95206 1070 aa16.8■□□□□ 0.28
SNX1-203ENST00000558040 C6P13671 934 aa16.8■□□□□ 0.28
SNX1-203ENST00000558040 GCAP28676 217 aa16.8■□□□□ 0.28
SNX1-203ENST00000558040 SLC1A2P43004 574 aa16.8■□□□□ 0.28
SNX1-203ENST00000558040 TTPAP49638 278 aa16.8■□□□□ 0.28
SNX1-203ENST00000558040 TAS2R38P59533 333 aa16.8■□□□□ 0.28
SNX1-203ENST00000558040 ITGA9Q13797 1035 aa16.8■□□□□ 0.28
SNX1-203ENST00000558040 TMED2Q15363 201 aa16.8■□□□□ 0.28
SNX1-203ENST00000558040 GPR33Q49SQ1 333 aa16.8■□□□□ 0.28
SNX1-203ENST00000558040 RNF187Q5TA31 235 aaPredicted RBP16.8■□□□□ 0.28
SNX1-203ENST00000558040 LYPLAL1Q5VWZ2 237 aa16.8■□□□□ 0.28
SNX1-203ENST00000558040 KIAA1161Q6NSJ0 714 aa16.8■□□□□ 0.28
SNX1-203ENST00000558040 CERS6Q6ZMG9 384 aa16.8■□□□□ 0.28
SNX1-203ENST00000558040 Q6ZVL8 140 aa16.8■□□□□ 0.28
SNX1-203ENST00000558040 ZNF765Q7L2R6 523 aa16.8■□□□□ 0.28
SNX1-203ENST00000558040 SNX20Q7Z614 316 aa16.8■□□□□ 0.28
SNX1-203ENST00000558040 TECPR1Q7Z6L1 1165 aa16.8■□□□□ 0.28
SNX1-203ENST00000558040 GPR26Q8NDV2 337 aa16.8■□□□□ 0.28
SNX1-203ENST00000558040 DTX3LQ8TDB6 740 aa16.8■□□□□ 0.28
SNX1-203ENST00000558040 DTD2Q96FN9 168 aa16.8■□□□□ 0.28
SNX1-203ENST00000558040 PGM2Q96G03 612 aa16.8■□□□□ 0.28
SNX1-203ENST00000558040 COQ10AQ96MF6 247 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms