RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 EXD1Q8NHP7 514 aa13.57□□□□□ -0.24
SNRPA1-204ENST00000558020 FAM71BQ8TC56 605 aa13.57□□□□□ -0.24
SNRPA1-204ENST00000558020 PIH1D2Q8WWB5 315 aa13.57□□□□□ -0.24
SNRPA1-204ENST00000558020 FATE1Q969F0 183 aa13.57□□□□□ -0.24
SNRPA1-204ENST00000558020 MED8Q96G25 268 aa13.57□□□□□ -0.24
SNRPA1-204ENST00000558020 BTBD6Q96KE9 485 aa13.57□□□□□ -0.24
SNRPA1-204ENST00000558020 TSGA13Q96PP4 275 aa13.57□□□□□ -0.24
SNRPA1-204ENST00000558020 DPYSL5Q9BPU6 564 aa13.57□□□□□ -0.24
SNRPA1-204ENST00000558020 RBM22Q9NW64 420 aaKnown RBP eCLIP13.57□□□□□ -0.243e-9■■■■■ 38.6
SNRPA1-204ENST00000558020 RPL26L1Q9UNX3 145 aaKnown RBP13.57□□□□□ -0.24
SNRPA1-204ENST00000558020 CFAP46Q8IYW2 2715 aa13.56□□□□□ -0.24
SNRPA1-204ENST00000558020 HGSO14964 777 aaPredicted RBP13.56□□□□□ -0.24
SNRPA1-204ENST00000558020 B4GAT1O43505 415 aa13.56□□□□□ -0.24
SNRPA1-204ENST00000558020 ECEL1O95672 775 aa13.56□□□□□ -0.24
SNRPA1-204ENST00000558020 HGFP14210 728 aa13.56□□□□□ -0.24
SNRPA1-204ENST00000558020 IL4RP24394 825 aa13.56□□□□□ -0.24
SNRPA1-204ENST00000558020 ADCY8P40145 1251 aa13.56□□□□□ -0.24
SNRPA1-204ENST00000558020 POLD2P49005 469 aa13.56□□□□□ -0.24
SNRPA1-204ENST00000558020 OR1D5P58170 312 aa13.56□□□□□ -0.24
SNRPA1-204ENST00000558020 CTBSQ01459 385 aa13.56□□□□□ -0.24
SNRPA1-204ENST00000558020 MMRN1Q13201 1228 aa13.56□□□□□ -0.24
SNRPA1-204ENST00000558020 LRP8Q14114 963 aa13.56□□□□□ -0.24
SNRPA1-204ENST00000558020 PAFAH1B3Q15102 231 aaKnown RBP13.56□□□□□ -0.24
SNRPA1-204ENST00000558020 ANKRD20A8PQ5CZ79 823 aa13.56□□□□□ -0.24
SNRPA1-204ENST00000558020 MANEAQ5SRI9 462 aa13.56□□□□□ -0.24
SNRPA1-204ENST00000558020 LRRC66Q68CR7 880 aa13.56□□□□□ -0.24
SNRPA1-204ENST00000558020 PCSK4Q6UW60 755 aa13.56□□□□□ -0.24
SNRPA1-204ENST00000558020 ZNF438Q7Z4V0 828 aa13.56□□□□□ -0.24
SNRPA1-204ENST00000558020 TSPAN33Q86UF1 283 aa13.56□□□□□ -0.24
SNRPA1-204ENST00000558020 LUZP1Q86V48 1076 aa13.56□□□□□ -0.24
SNRPA1-204ENST00000558020 C17orf82Q86X59 251 aaPredicted RBP13.56□□□□□ -0.24
SNRPA1-204ENST00000558020 NRROSQ86YC3 692 aa13.56□□□□□ -0.24
SNRPA1-204ENST00000558020 CCDC112Q8NEF3 446 aa13.56□□□□□ -0.24
SNRPA1-204ENST00000558020 CTNNBL1Q8WYA6 563 aaPredicted RBP13.56□□□□□ -0.24
SNRPA1-204ENST00000558020 TTC9Q92623 222 aa13.56□□□□□ -0.24
SNRPA1-204ENST00000558020 ZNF830Q96NB3 372 aaPredicted RBP13.56□□□□□ -0.24
SNRPA1-204ENST00000558020 ZNF670Q9BS34 389 aa13.56□□□□□ -0.24
SNRPA1-204ENST00000558020 ABCG8Q9H221 673 aa13.56□□□□□ -0.24
SNRPA1-204ENST00000558020 RDH14Q9HBH5 336 aa13.56□□□□□ -0.24
SNRPA1-204ENST00000558020 CBX8Q9HC52 389 aa13.56□□□□□ -0.24
SNRPA1-204ENST00000558020 CTTNBP2NLQ9P2B4 639 aa13.56□□□□□ -0.24
SNRPA1-204ENST00000558020 UVRAGQ9P2Y5 699 aa13.56□□□□□ -0.24
SNRPA1-204ENST00000558020 TTLL3Q9Y4R7 772 aa13.56□□□□□ -0.24
SNRPA1-204ENST00000558020 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.56□□□□□ -0.24
SNRPA1-204ENST00000558020 A0A0J9YYE9 177 aa13.55□□□□□ -0.24
SNRPA1-204ENST00000558020 FZD6O60353 706 aa13.55□□□□□ -0.24
SNRPA1-204ENST00000558020 TRBC1P01850 177 aa13.55□□□□□ -0.24
SNRPA1-204ENST00000558020 FUCA1P04066 466 aa13.55□□□□□ -0.24
SNRPA1-204ENST00000558020 PDHA1P08559 390 aa13.55□□□□□ -0.24
SNRPA1-204ENST00000558020 H2AFZP0C0S5 128 aa13.55□□□□□ -0.24
SNRPA1-204ENST00000558020 PLA2G2AP14555 144 aa13.55□□□□□ -0.24
SNRPA1-204ENST00000558020 PBX1P40424 430 aa13.55□□□□□ -0.24
SNRPA1-204ENST00000558020 ACTR1BP42025 376 aa13.55□□□□□ -0.24
SNRPA1-204ENST00000558020 MAPK10P53779 464 aa13.55□□□□□ -0.24
SNRPA1-204ENST00000558020 MAZP56270 477 aaKnown RBP13.55□□□□□ -0.24
SNRPA1-204ENST00000558020 ACTR1AP61163 376 aa13.55□□□□□ -0.24
SNRPA1-204ENST00000558020 PTSQ03393 145 aa13.55□□□□□ -0.24
SNRPA1-204ENST00000558020 SQSTM1Q13501 440 aa13.55□□□□□ -0.24
SNRPA1-204ENST00000558020 TRA2AQ13595 282 aaKnown RBP eCLIP13.55□□□□□ -0.24
SNRPA1-204ENST00000558020 DPYSL3Q14195 570 aa13.55□□□□□ -0.24
SNRPA1-204ENST00000558020 NR1D2Q14995 579 aa13.55□□□□□ -0.24
SNRPA1-204ENST00000558020 KIAA1614Q5VZ46 1190 aa13.55□□□□□ -0.24
SNRPA1-204ENST00000558020 DOK6Q6PKX4 331 aa13.55□□□□□ -0.24
SNRPA1-204ENST00000558020 H2AFVQ71UI9 128 aa13.55□□□□□ -0.24
SNRPA1-204ENST00000558020 GALNT13Q8IUC8 556 aa13.55□□□□□ -0.24
SNRPA1-204ENST00000558020 SLITRK4Q8IW52 837 aa13.55□□□□□ -0.24
SNRPA1-204ENST00000558020 CCNYQ8ND76 341 aa13.55□□□□□ -0.24
SNRPA1-204ENST00000558020 ZNF564Q8TBZ8 553 aaPredicted RBP13.55□□□□□ -0.24
SNRPA1-204ENST00000558020 CCHCR1Q8TD31 782 aa13.55□□□□□ -0.24
SNRPA1-204ENST00000558020 MAML1Q92585 1016 aa13.55□□□□□ -0.24
SNRPA1-204ENST00000558020 USP7Q93009 1102 aa13.55□□□□□ -0.24
SNRPA1-204ENST00000558020 SGF29Q96ES7 293 aa13.55□□□□□ -0.24
SNRPA1-204ENST00000558020 SCARF2Q96GP6 870 aaPredicted RBP13.55□□□□□ -0.24
SNRPA1-204ENST00000558020 OR2M4Q96R27 311 aa13.55□□□□□ -0.24
SNRPA1-204ENST00000558020 ARHGAP9Q9BRR9 750 aa13.55□□□□□ -0.24
SNRPA1-204ENST00000558020 FUCA2Q9BTY2 467 aa13.55□□□□□ -0.24
SNRPA1-204ENST00000558020 ADGRE3Q9BY15 652 aa13.55□□□□□ -0.24
SNRPA1-204ENST00000558020 SEMA6CQ9H3T2 930 aa13.55□□□□□ -0.24
SNRPA1-204ENST00000558020 PRAMEF33A0A0G2JMD5 474 aa13.54□□□□□ -0.24
SNRPA1-204ENST00000558020 SYCE3A1L190 88 aa13.54□□□□□ -0.24
SNRPA1-204ENST00000558020 RGSL1A5PLK6 1076 aa13.54□□□□□ -0.24
SNRPA1-204ENST00000558020 B8ZZF3 427 aa13.54□□□□□ -0.24
SNRPA1-204ENST00000558020 PRAMEF10O60809 474 aa13.54□□□□□ -0.24
SNRPA1-204ENST00000558020 PROSCO94903 275 aa13.54□□□□□ -0.24
SNRPA1-204ENST00000558020 ASMTLO95671 621 aa13.54□□□□□ -0.24
SNRPA1-204ENST00000558020 ITGB2P05107 769 aa13.54□□□□□ -0.24
SNRPA1-204ENST00000558020 CD48P09326 243 aa13.54□□□□□ -0.24
SNRPA1-204ENST00000558020 SFTPCP11686 197 aa13.54□□□□□ -0.24
SNRPA1-204ENST00000558020 ITIH1P19827 911 aa13.54□□□□□ -0.24
SNRPA1-204ENST00000558020 AK4P27144 223 aaPredicted RBP13.54□□□□□ -0.24
SNRPA1-204ENST00000558020 CD1CP29017 333 aa13.54□□□□□ -0.24
SNRPA1-204ENST00000558020 CSTF2P33240 577 aaKnown RBP eCLIP13.54□□□□□ -0.24
SNRPA1-204ENST00000558020 GJC1P36383 396 aa13.54□□□□□ -0.24
SNRPA1-204ENST00000558020 PPM1FP49593 454 aaPredicted RBP13.54□□□□□ -0.24
SNRPA1-204ENST00000558020 ARSEP51690 589 aa13.54□□□□□ -0.24
SNRPA1-204ENST00000558020 GPLD1P80108 840 aa13.54□□□□□ -0.24
SNRPA1-204ENST00000558020 LY6DQ14210 128 aa13.54□□□□□ -0.24
SNRPA1-204ENST00000558020 ALG1LQ6GMV1 187 aa13.54□□□□□ -0.24
SNRPA1-204ENST00000558020 SFTPA2Q8IWL1 248 aa13.54□□□□□ -0.24
SNRPA1-204ENST00000558020 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms