RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 BNIP3Q12983 259 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 NFYCQ13952 458 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 TGFBIQ15582 683 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 FSCN1Q16658 493 aaKnown RBP11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 KANK2Q63ZY3 851 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 ZNF772Q68DY9 489 aaPredicted RBP11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 GRAMD4Q6IC98 578 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 ANKRD26P1Q6NSI1 321 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 FAM117BQ6P1L5 589 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 BLOC1S3Q6QNY0 202 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 KDELC1Q6UW63 502 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 USP51Q70EK9 711 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 IFNEQ86WN2 208 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 PTRH1Q86Y79 214 aaKnown RBP11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 PHYKPLQ8IUZ5 450 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 LEMD2Q8NC56 503 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 PAPD5Q8NDF8 572 aaKnown RBP11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 OR6J1Q8NGC5 347 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 SLC16A10Q8TF71 515 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 TSPEARQ8WU66 669 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 OSCP1Q8WVF1 389 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 PTERQ96BW5 349 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 KCTD14Q9BQ13 255 aaPredicted RBP11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 NAA50Q9GZZ1 169 aaKnown RBP11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 SLC25A51Q9H1U9 297 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 IFT80Q9P2H3 777 aaPredicted RBP11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 SH3BP1Q9Y3L3 701 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 NYNRINQ9P2P1 1898 aaKnown RBP11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 TCRBV5S2A0A599 114 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 VPS4BO75351 444 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 CPNE6O95741 557 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 S1PR4O95977 384 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 HOXD8P13378 290 aaPredicted RBP11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 CCNA2P20248 432 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 HOXC13P31276 330 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 PSMD7P51665 324 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 TMBIM6P55061 237 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 ADARB1P78563 741 aaKnown RBP11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 RELAQ04206 551 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 TNK2Q07912 1038 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 NFATC3Q12968 1075 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 SNX17Q15036 470 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 SMG8Q8ND04 991 aaKnown RBP11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 OR52K2Q8NGK3 314 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 OR13J1Q8NGT2 312 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 TRIM62Q9BVG3 475 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 MFSD1Q9H3U5 465 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 RGS18Q9NS28 235 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 GNPTGQ9UJJ9 305 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 BLOC1S6Q9UL45 172 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 CDH9Q9ULB4 789 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 KCNH4Q9UQ05 1017 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 A0A1W2PP18 115 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 TYW5A2RUC4 315 aaKnown RBP11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 FUOMA2VDF0 154 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 IQCA1LA6NCM1 817 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 TMEM221A6NGB7 291 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 H0YAE9 185 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 PTGESO14684 152 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 BAIAP3O94812 1187 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 ESRRBO95718 433 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 SNAP29O95721 258 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 ALBP02768 609 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 CD1DP15813 335 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 IGFBP6P24592 240 aaPredicted RBP11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 FOXA1P55317 472 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 KCNK10P57789 538 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 LIPEQ05469 1076 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 TRAF2Q12933 501 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 PLCL1Q15111 1095 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 BRMS1LQ5PSV4 323 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 ZNF773Q6PK81 442 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 LDB1Q86U70 411 aaPredicted RBP11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 PIM3Q86V86 326 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 LRRC49Q8IUZ0 686 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 CENPSQ8N2Z9 138 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 RYBPQ8N488 228 aaPredicted RBP11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 PNPLA1Q8N8W4 532 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 OR13F1Q8NGS4 319 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 DNAJB14Q8TBM8 379 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 TMEM40Q8WWA1 233 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 ACDQ96AP0 544 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 PPP1R10Q96QC0 940 aaKnown RBP11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 C1orf50Q9BV19 199 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 KATNBL1Q9H079 304 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 TSPYL2Q9H2G4 693 aaPredicted RBP11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 POLG2Q9UHN1 485 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 TIMM13Q9Y5L4 95 aaPredicted RBP11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 SLC30A1Q9Y6M5 507 aa11.79□□□□□ -0.52
VIPAS39-211ENST00000557658 PAGE1O75459 146 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 SIX3O95343 332 aaPredicted RBP11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 SLC4A1P02730 911 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 SMIM10L2AP0DMW4 78 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 SMIM10L2BP0DMW5 78 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 SMPD1P17405 629 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 EEF1B2P24534 225 aaKnown RBP11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 YAP1P46937 504 aaKnown RBP11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 CCR3P51677 355 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 EEFSECP57772 596 aaKnown RBP11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 YBX1P67809 324 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms