RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 USP51Q70EK9 711 aa16.27■□□□□ 0.19
SHMT2-232ENST00000557487 PHYKPLQ8IUZ5 450 aa16.27■□□□□ 0.19
SHMT2-232ENST00000557487 RNF168Q8IYW5 571 aaPredicted RBP16.27■□□□□ 0.19
SHMT2-232ENST00000557487 TWIST2Q8WVJ9 160 aa16.27■□□□□ 0.19
SHMT2-232ENST00000557487 ANKRD49Q8WVL7 239 aa16.27■□□□□ 0.19
SHMT2-232ENST00000557487 COG8Q96MW5 612 aa16.27■□□□□ 0.19
SHMT2-232ENST00000557487 SLC39A3Q9BRY0 314 aa16.27■□□□□ 0.19
SHMT2-232ENST00000557487 SEZ6LQ9BYH1 1024 aa16.27■□□□□ 0.19
SHMT2-232ENST00000557487 ANAPC2Q9UJX6 822 aa16.27■□□□□ 0.19
SHMT2-232ENST00000557487 OAZ3Q9UMX2 235 aa16.27■□□□□ 0.19
SHMT2-232ENST00000557487 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.26■□□□□ 0.19
SHMT2-232ENST00000557487 A0A1W2PP18 115 aa16.26■□□□□ 0.19
SHMT2-232ENST00000557487 GRXCR2A6NFK2 248 aa16.26■□□□□ 0.19
SHMT2-232ENST00000557487 ESRRBO95718 433 aa16.26■□□□□ 0.19
SHMT2-232ENST00000557487 CPNE6O95741 557 aa16.26■□□□□ 0.19
SHMT2-232ENST00000557487 SNAI1O95863 264 aaPredicted RBP16.26■□□□□ 0.19
SHMT2-232ENST00000557487 S1PR4O95977 384 aa16.26■□□□□ 0.19
SHMT2-232ENST00000557487 GNAO1P09471 354 aa16.26■□□□□ 0.19
SHMT2-232ENST00000557487 CAPN3P20807 821 aa16.26■□□□□ 0.19
SHMT2-232ENST00000557487 CCR1P32246 355 aa16.26■□□□□ 0.19
SHMT2-232ENST00000557487 CHRNA4P43681 627 aa16.26■□□□□ 0.19
SHMT2-232ENST00000557487 RPS9P46781 194 aaKnown RBP16.26■□□□□ 0.19
SHMT2-232ENST00000557487 RENBPP51606 427 aa16.26■□□□□ 0.19
SHMT2-232ENST00000557487 SUOXP51687 545 aa16.26■□□□□ 0.19
SHMT2-232ENST00000557487 CRYBB1P53674 252 aaPredicted RBP16.26■□□□□ 0.19
SHMT2-232ENST00000557487 RAB39AQ14964 217 aa16.26■□□□□ 0.19
SHMT2-232ENST00000557487 ZNF280DQ6N043 979 aa16.26■□□□□ 0.19
SHMT2-232ENST00000557487 FKBP9P1Q75LS8 142 aa16.26■□□□□ 0.19
SHMT2-232ENST00000557487 PROSER1Q86XN7 944 aa16.26■□□□□ 0.19
SHMT2-232ENST00000557487 RTL3Q8N8U3 475 aaKnown RBP16.26■□□□□ 0.19
SHMT2-232ENST00000557487 ZBTB8BQ8NAP8 495 aaPredicted RBP16.26■□□□□ 0.19
SHMT2-232ENST00000557487 DDHD1Q8NEL9 900 aa16.26■□□□□ 0.19
SHMT2-232ENST00000557487 GIPC3Q8TF64 312 aa16.26■□□□□ 0.19
SHMT2-232ENST00000557487 CYGBQ8WWM9 190 aa16.26■□□□□ 0.19
SHMT2-232ENST00000557487 IMP4Q96G21 291 aaKnown RBP16.26■□□□□ 0.19
SHMT2-232ENST00000557487 ZNF419Q96HQ0 510 aaPredicted RBP16.26■□□□□ 0.19
SHMT2-232ENST00000557487 C3orf30Q96M34 536 aa16.26■□□□□ 0.19
SHMT2-232ENST00000557487 FBRSL1Q9HCM7 1045 aaKnown RBP16.26■□□□□ 0.19
SHMT2-232ENST00000557487 SLC30A1Q9Y6M5 507 aa16.26■□□□□ 0.19
SHMT2-232ENST00000557487 NUP205Q92621 2012 aa16.26■□□□□ 0.19
SHMT2-232ENST00000557487 MROH6A6NGR9 719 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 CDK14O94921 469 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 F2P00734 622 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 LDLRP01130 860 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 FDXRP22570 491 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 SH3BP2P78314 561 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 VPS26BQ4G0F5 336 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 SLC44A4Q53GD3 710 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 ZNF789Q5FWF6 425 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 DDIASQ8IXT1 998 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.25■□□□□ 0.19
SHMT2-232ENST00000557487 ARRDC4Q8NCT1 418 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 OR13J1Q8NGT2 312 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 NRBF2Q96F24 287 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 NUSAP1Q9BXS6 441 aaKnown RBP16.25■□□□□ 0.19
SHMT2-232ENST00000557487 ABHD16BQ9H3Z7 469 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 TFB2MQ9H5Q4 396 aaKnown RBP16.25■□□□□ 0.19
SHMT2-232ENST00000557487 POLR1BQ9H9Y6 1135 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 GMIPQ9P107 970 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 GNPTGQ9UJJ9 305 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 CDC14AQ9UNH5 594 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 ATP6AP2A0A1C7CYW4 349 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 TCRBV5S2A0A599 114 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 UBXN8O00124 270 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 PAGE1O75459 146 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 ATP6AP2O75787 350 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 BAIAP3O94812 1187 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 INHBBP09529 407 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 CD1DP15813 335 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 PORP16435 677 aaPredicted RBP16.25■□□□□ 0.19
SHMT2-232ENST00000557487 C21orf59P57076 290 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 PMS2P3Q13401 168 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 FXNQ16595 210 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 CYP51A1Q16850 503 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 PDCD4Q53EL6 469 aaKnown RBP16.25■□□□□ 0.19
SHMT2-232ENST00000557487 CYBRD1Q53TN4 286 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 PITRM1Q5JRX3 1037 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 GPR158Q5T848 1215 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 GPR150Q8NGU9 434 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 TBC1D15Q8TC07 691 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 TMEM125Q96AQ2 219 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 MAGED4Q96JG8 741 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 PHF12Q96QT6 1004 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 PARK7Q99497 189 aaKnown RBP16.25■□□□□ 0.19
SHMT2-232ENST00000557487 BDH2Q9BUT1 245 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 SIK2Q9H0K1 926 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 SMOC2Q9H3U7 446 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 ALG2Q9H553 416 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 MAGEE1Q9HCI5 957 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 MID1IP1Q9NPA3 183 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 ABCC13Q9NSE7 274 aa16.25■□□□□ 0.19
SHMT2-232ENST00000557487 EI24O14681 340 aa16.24■□□□□ 0.19
SHMT2-232ENST00000557487 PIP5K1BO14986 540 aa16.24■□□□□ 0.19
SHMT2-232ENST00000557487 EEDO75530 441 aaKnown RBP16.24■□□□□ 0.19
SHMT2-232ENST00000557487 ATE1O95260 518 aa16.24■□□□□ 0.19
SHMT2-232ENST00000557487 ARSAP15289 507 aa16.24■□□□□ 0.19
SHMT2-232ENST00000557487 HTR1EP28566 365 aa16.24■□□□□ 0.19
SHMT2-232ENST00000557487 SLC5A3P53794 718 aa16.24■□□□□ 0.19
SHMT2-232ENST00000557487 CDKN2DP55273 166 aa16.24■□□□□ 0.19
SHMT2-232ENST00000557487 KCNK10P57789 538 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms