RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 PDXPQ96GD0 296 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 DHTKD1Q96HY7 919 aaPredicted RBP5.89□□□□□ -1.47
VPS33B-207ENST00000557470 PSMG3-AS1Q96PY0 264 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 HAPLN3Q96S86 360 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 RBM15Q96T37 977 aaKnown RBP eCLIP5.89□□□□□ -1.47
VPS33B-207ENST00000557470 CRACR2AQ9BSW2 395 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 OSBPL1AQ9BXW6 950 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 ZYG11BQ9C0D3 744 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 SCAND2PQ9GZW5 306 aaPredicted RBP5.89□□□□□ -1.47
VPS33B-207ENST00000557470 SEMA6CQ9H3T2 930 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 SYNCQ9H7C4 482 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 RDH14Q9HBH5 336 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 PLCB1Q9NQ66 1216 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 RRN3Q9NYV6 651 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.89□□□□□ -1.47
VPS33B-207ENST00000557470 KLQ9UEF7 1012 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 ZNF180Q9UJW8 692 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 STAP1Q9ULZ2 295 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 OR1A2Q9Y585 309 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.89□□□□□ -1.47
VPS33B-207ENST00000557470 LRP4O75096 1905 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 SDK2Q58EX2 2172 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 DOCK4Q8N1I0 1966 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 CXorf51AA0A1B0GTR3 108 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 BLACEA4D250 179 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 CLGNO14967 610 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 F9P00740 461 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 PCCBP05166 539 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 FAM153BP0C7A2 387 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 LIFP15018 202 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 PNLIPP16233 465 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 BMP6P22004 513 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 HTR1BP28222 390 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 FLT3P36888 993 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 GEMIN4P57678 1058 aaKnown RBP5.88□□□□□ -1.47
VPS33B-207ENST00000557470 SNX16P57768 344 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 SNRPD1P62314 119 aaKnown RBP5.88□□□□□ -1.47
VPS33B-207ENST00000557470 B4GALNT1Q00973 533 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 ARHGEF7Q14155 803 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 INPP5AQ14642 412 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 AMZ1Q400G9 498 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 TMEM52BQ4KMG9 183 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 C14orf28Q4W4Y0 310 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 RAB6CQ53S08 254 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 ZC3H12BQ5HYM0 836 aaKnown RBP5.88□□□□□ -1.47
VPS33B-207ENST00000557470 FAM102AQ5T9C2 384 aaPredicted RBP5.88□□□□□ -1.47
VPS33B-207ENST00000557470 MANEALQ5VSG8 457 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 HIST2H2BCQ6DN03 193 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 TRNP1Q6NT89 227 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 OGFOD3Q6PK18 319 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 ENPP7Q6UWV6 458 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 GDPD4Q6W3E5 623 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 RINLQ6ZS11 566 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 BNIPLQ7Z465 357 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 TAF8Q7Z7C8 310 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 ZBTB46Q86UZ6 589 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 SLC47A2Q86VL8 602 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 NLRP14Q86W24 1093 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 FAM131BQ86XD5 332 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 ZDHHC17Q8IUH5 632 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 FAM26EQ8N5C1 309 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 NETO2Q8NC67 525 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 RCBTB1Q8NDN9 531 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 FAM46DQ8NEK8 389 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 CCL4L1Q8NHW4 92 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 NELFBQ8WX92 580 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 OR1E3Q8WZA6 343 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 SHC3Q92529 594 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 CFAP57Q96MR6 1250 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 WDR92Q96MX6 357 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 GDAP1L1Q96MZ0 367 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 MDFIQ99750 246 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 NUDT22Q9BRQ3 303 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 APOOQ9BUR5 198 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 B3GNT4Q9C0J1 378 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 RAB6CQ9H0N0 254 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 ZNF71Q9NQZ8 489 aaPredicted RBP5.88□□□□□ -1.47
VPS33B-207ENST00000557470 LRIT1Q9P2V4 623 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 PPARGC1AQ9UBK2 798 aaKnown RBP5.88□□□□□ -1.47
VPS33B-207ENST00000557470 DKK3Q9UBP4 350 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 DNAI1Q9UI46 699 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 TUBD1Q9UJT1 453 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 ANAPC2Q9UJX6 822 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 AJAP1Q9UKB5 411 aaPredicted RBP5.88□□□□□ -1.47
VPS33B-207ENST00000557470 MAN1B1Q9UKM7 699 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 GTF2A1LQ9UNN4 478 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 NEU3Q9UQ49 428 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 CTNND2Q9UQB3 1225 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 PAXBP1Q9Y5B6 917 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 DGKBQ9Y6T7 804 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 LRBAP50851 2863 aa5.88□□□□□ -1.47
VPS33B-207ENST00000557470 LRRK1Q38SD2 2015 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 CREBBPQ92793 2442 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 IGHV5-10-1A0A0J9YXX1 117 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 BICDL2A1A5D9 508 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 TMEM202A6NGA9 273 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 FAM72CH0Y354 149 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 HGSO14964 777 aaPredicted RBP5.87□□□□□ -1.47
VPS33B-207ENST00000557470 INSIG1O15503 277 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 B4GAT1O43505 415 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms