RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-231	ENST00000557336	SCARF2	Q96GP6	870 aa	Predicted RBP	11.15	□□□□□ -0.62
HNRNPC-231	ENST00000557336	NUDT22	Q9BRQ3	303 aa		11.15	□□□□□ -0.62
HNRNPC-231	ENST00000557336	CARS2	Q9HA77	564 aa	Known RBP	11.15	□□□□□ -0.62
HNRNPC-231	ENST00000557336	PCDH18	Q9HCL0	1135 aa		11.15	□□□□□ -0.62
HNRNPC-231	ENST00000557336	TAAR2	Q9P1P5	351 aa		11.15	□□□□□ -0.62
HNRNPC-231	ENST00000557336	SLC17A4	Q9Y2C5	497 aa		11.15	□□□□□ -0.62
HNRNPC-231	ENST00000557336	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	11.15	□□□□□ -0.62
HNRNPC-231	ENST00000557336		A0A1B0GTH6	734 aa		11.14	□□□□□ -0.63
HNRNPC-231	ENST00000557336		A0A1W2PQC6	194 aa		11.14	□□□□□ -0.63
HNRNPC-231	ENST00000557336	PPM1D	O15297	605 aa		11.14	□□□□□ -0.63
HNRNPC-231	ENST00000557336	PGLS	O95336	258 aa		11.14	□□□□□ -0.63
HNRNPC-231	ENST00000557336	ECEL1	O95672	775 aa		11.14	□□□□□ -0.63
HNRNPC-231	ENST00000557336	CP	P00450	1065 aa		11.14	□□□□□ -0.63
HNRNPC-231	ENST00000557336	JMJD7	P0C870	316 aa		11.14	□□□□□ -0.63
HNRNPC-231	ENST00000557336	LIPC	P11150	499 aa		11.14	□□□□□ -0.63
HNRNPC-231	ENST00000557336	RENBP	P51606	427 aa		11.14	□□□□□ -0.63
HNRNPC-231	ENST00000557336	ARSE	P51690	589 aa		11.14	□□□□□ -0.63
HNRNPC-231	ENST00000557336	ZNF135	P52742	658 aa	Predicted RBP	11.14	□□□□□ -0.63
HNRNPC-231	ENST00000557336	CDK3	Q00526	305 aa		11.14	□□□□□ -0.63
HNRNPC-231	ENST00000557336	CTBS	Q01459	385 aa		11.14	□□□□□ -0.63
HNRNPC-231	ENST00000557336	SLC25A11	Q02978	314 aa	Known RBP	11.14	□□□□□ -0.63
HNRNPC-231	ENST00000557336	ANO6	Q4KMQ2	910 aa		11.14	□□□□□ -0.63
HNRNPC-231	ENST00000557336	CCDC183	Q5T5S1	534 aa		11.14	□□□□□ -0.63
HNRNPC-231	ENST00000557336	PPP1R2P3	Q6NXS1	205 aa		11.14	□□□□□ -0.63
HNRNPC-231	ENST00000557336	USP53	Q70EK8	1073 aa		11.14	□□□□□ -0.63
HNRNPC-231	ENST00000557336	VASH2	Q86V25	355 aa		11.14	□□□□□ -0.63
HNRNPC-231	ENST00000557336	NAGS	Q8N159	534 aa		11.14	□□□□□ -0.63
HNRNPC-231	ENST00000557336	TEX26	Q8N6G2	289 aa		11.14	□□□□□ -0.63
HNRNPC-231	ENST00000557336	FAM71B	Q8TC56	605 aa		11.14	□□□□□ -0.63
HNRNPC-231	ENST00000557336	ZDHHC1	Q8WTX9	485 aa		11.14	□□□□□ -0.63
HNRNPC-231	ENST00000557336	HTR3C	Q8WXA8	447 aa		11.14	□□□□□ -0.63
HNRNPC-231	ENST00000557336	BTBD6	Q96KE9	485 aa		11.14	□□□□□ -0.63
HNRNPC-231	ENST00000557336	BPIFA3	Q9BQP9	254 aa		11.14	□□□□□ -0.63
HNRNPC-231	ENST00000557336	TRNAU1AP	Q9NX07	287 aa	Known RBP	11.14	□□□□□ -0.63
HNRNPC-231	ENST00000557336	MYO1A	Q9UBC5	1043 aa		11.14	□□□□□ -0.63
HNRNPC-231	ENST00000557336	MOSPD1	Q9UJG1	213 aa		11.14	□□□□□ -0.63
HNRNPC-231	ENST00000557336	PHTF1	Q9UMS5	762 aa		11.14	□□□□□ -0.63
HNRNPC-231	ENST00000557336	SUFU	Q9UMX1	484 aa		11.14	□□□□□ -0.63
HNRNPC-231	ENST00000557336	LRRK2	Q5S007	2527 aa		11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	IGHV5-10-1	A0A0J9YXX1	117 aa		11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336		H3BRJ5	948 aa		11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	CPNE6	O95741	557 aa		11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	EML2	O95834	649 aa		11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	PRL	P01236	227 aa		11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	CD48	P09326	243 aa		11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	FGF3	P11487	239 aa	Predicted RBP	11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	CTPS1	P17812	591 aa		11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	TEAD1	P28347	426 aa		11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	ADCY8	P40145	1251 aa		11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	GNPDA1	P46926	289 aa		11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	CYP4F2	P78329	520 aa		11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	PTS	Q03393	145 aa		11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	DPT	Q07507	201 aa		11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	SQSTM1	Q13501	440 aa		11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	ARHGEF7	Q14155	803 aa		11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	ZNF235	Q14590	738 aa		11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	NR1I3	Q14994	352 aa		11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	IQCB1	Q15051	598 aa		11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	AMZ1	Q400G9	498 aa		11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	BOLA3	Q53S33	107 aa		11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	DENND2C	Q68D51	928 aa		11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	TMCO3	Q6UWJ1	677 aa		11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	RCBTB1	Q8NDN9	531 aa		11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	PDCD6IP	Q8WUM4	868 aa	Known RBP	11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	HSPH1	Q92598	858 aa		11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	EXTL1	Q92935	676 aa		11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	SCAMP4	Q969E2	229 aa		11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	TMEM159	Q96B96	161 aa		11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	SGF29	Q96ES7	293 aa		11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	AGAP2	Q99490	1192 aa		11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	ABCG8	Q9H221	673 aa		11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	SUDS3	Q9H7L9	328 aa	Predicted RBP	11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	ZWILCH	Q9H900	591 aa		11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	PHPT1	Q9NRX4	125 aa	Predicted RBP	11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	TMEM9	Q9P0T7	183 aa		11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	TMEM98	Q9Y2Y6	226 aa		11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	SPEN	Q96T58	3664 aa	Known RBP	11.13	□□□□□ -0.63
HNRNPC-231	ENST00000557336	NBAS	A2RRP1	2371 aa		11.12	□□□□□ -0.63
HNRNPC-231	ENST00000557336	SDK2	Q58EX2	2172 aa		11.12	□□□□□ -0.63
HNRNPC-231	ENST00000557336		A0A1W2PQ67	120 aa		11.12	□□□□□ -0.63
HNRNPC-231	ENST00000557336	PSMD11	O00231	422 aa		11.12	□□□□□ -0.63
HNRNPC-231	ENST00000557336	PDE2A	O00408	941 aa	Predicted RBP	11.12	□□□□□ -0.63
HNRNPC-231	ENST00000557336	IVL	P07476	585 aa		11.12	□□□□□ -0.63
HNRNPC-231	ENST00000557336	MYBL1	P10243	752 aa		11.12	□□□□□ -0.63
HNRNPC-231	ENST00000557336	DES	P17661	470 aa		11.12	□□□□□ -0.63
HNRNPC-231	ENST00000557336	ALDH4A1	P30038	563 aa		11.12	□□□□□ -0.63
HNRNPC-231	ENST00000557336	CSF2RB	P32927	897 aa		11.12	□□□□□ -0.63
HNRNPC-231	ENST00000557336	HSPA9	P38646	679 aa	Known RBP	11.12	□□□□□ -0.63
HNRNPC-231	ENST00000557336	PBX1	P40424	430 aa		11.12	□□□□□ -0.63
HNRNPC-231	ENST00000557336	MAPK10	P53779	464 aa		11.12	□□□□□ -0.63
HNRNPC-231	ENST00000557336	KLHL30	Q0D2K2	578 aa		11.12	□□□□□ -0.63
HNRNPC-231	ENST00000557336	ATP13A4	Q4VNC1	1196 aa		11.12	□□□□□ -0.63
HNRNPC-231	ENST00000557336	PHF19	Q5T6S3	580 aa		11.12	□□□□□ -0.63
HNRNPC-231	ENST00000557336	NKAIN2	Q5VXU1	208 aa		11.12	□□□□□ -0.63
HNRNPC-231	ENST00000557336	SLC30A9	Q6PML9	568 aa		11.12	□□□□□ -0.63
HNRNPC-231	ENST00000557336	ADAMTSL4	Q6UY14	1074 aa		11.12	□□□□□ -0.63
HNRNPC-231	ENST00000557336	TRIM74	Q86UV6	250 aa		11.12	□□□□□ -0.63
HNRNPC-231	ENST00000557336	PIM3	Q86V86	326 aa		11.12	□□□□□ -0.63

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