RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 SPATA19Q7Z5L4 167 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 MCEMP1Q8IX19 187 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 SLC34A3Q8N130 599 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 PQLC1Q8N2U9 271 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 KCNN1Q92952 543 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 TAMM41Q96BW9 452 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 MASTLQ96GX5 879 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 ACOT2P49753 483 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 LMBRD2Q68DH5 695 aaPredicted RBP8.82□□□□□ -1
SYNE3-205ENST00000557275 RNF180Q86T96 592 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 ADGRF2Q8IZF7 708 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 CD93Q9NPY3 652 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 RFXANKO14593 260 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 HDAC3O15379 428 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 CASP1P29466 404 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 PDK4Q16654 411 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 GHDCQ8N2G8 530 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 CLPTM1LQ96KA5 538 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 HSPA12BQ96MM6 686 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 ZNF347Q96SE7 839 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 TRPV2Q9Y5S1 764 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 ATG12O94817 140 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 CTBP2P56545 445 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 RIOX2Q8IUF8 465 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 KLHL15Q96M94 604 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 ZFP57Q9NU63 452 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 NDUFAF4Q9P032 175 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 COX4I1P13073 169 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 HSD17B2P37059 387 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 AP5B1Q2VPB7 878 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 COLGALT1Q8NBJ5 622 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 TMEM161BQ8NDZ6 487 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 PDPK1O15530 556 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 DNAJA1P31689 397 aaKnown RBP8.82□□□□□ -1
SYNE3-205ENST00000557275 SLC13A2Q13183 592 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 DNAJC14Q6Y2X3 702 aaPredicted RBP8.82□□□□□ -1
SYNE3-205ENST00000557275 ZNF563Q8TA94 476 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 TBC1D15Q8TC07 691 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 KCNH7Q9NS40 1196 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 ARL8BQ9NVJ2 186 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 GHRLQ9UBU3 117 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 TUBE1Q9UJT0 475 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 E2F8A0AVK6 867 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 ILVBLA1L0T0 632 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 UBXN7O94888 489 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 PSKH1P11801 424 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 KLRC1P26715 233 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 CARD16Q5EG05 197 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 MRPL41Q8IXM3 137 aaKnown RBP8.82□□□□□ -1
SYNE3-205ENST00000557275 POU6F1Q14863 301 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 ROPN1LQ96C74 230 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 SEMA6AQ9H2E6 1030 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 N6AMT1Q9Y5N5 214 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 MAPTP10636 758 aaKnown RBP8.82□□□□□ -1
SYNE3-205ENST00000557275 FGFR3P22607 806 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 CHST13Q8NET6 341 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 ELOVL4Q9GZR5 314 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 ZNF70Q9UC06 446 aaPredicted RBP8.82□□□□□ -1
SYNE3-205ENST00000557275 PCDHB12Q9Y5F1 795 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 PROSCO94903 275 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 FGFR1P11362 822 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 GDI2P50395 445 aaKnown RBP8.82□□□□□ -1
SYNE3-205ENST00000557275 BAIAP2L2Q6UXY1 529 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 MOB2Q70IA6 237 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 LIN37Q96GY3 246 aaPredicted RBP8.82□□□□□ -1
SYNE3-205ENST00000557275 AGPAT5Q9NUQ2 364 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 TRIP11Q15643 1979 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 OR1E1P30953 314 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 SNRPD1P62314 119 aaKnown RBP8.82□□□□□ -1
SYNE3-205ENST00000557275 TBRG1Q3YBR2 411 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 ARMC12Q5T9G4 340 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 DNM1P34Q6PK57 102 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 FCRL4Q96PJ5 515 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 FAM83DQ9H4H8 585 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 FKBP7Q9Y680 259 aa8.82□□□□□ -1
SYNE3-205ENST00000557275 PTPN9P43378 593 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 SCNN1BP51168 640 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 GPRIN3Q6ZVF9 776 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 S100A7AQ86SG5 101 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 ZC3H7AQ8IWR0 971 aaKnown RBP8.81□□□□□ -1
SYNE3-205ENST00000557275 OR52E6Q96RD3 313 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 VRK1Q99986 396 aaPredicted RBP8.81□□□□□ -1
SYNE3-205ENST00000557275 ABI3Q9P2A4 366 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 ASLP04424 464 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 BCL2L1Q07817 233 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 QRICH1Q2TAL8 776 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 OXR1Q8N573 874 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 BTF3L4Q96K17 158 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 TLL2Q9Y6L7 1015 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 CYP1A2P05177 515 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 GMPSP49915 693 aaPredicted RBP8.81□□□□□ -1
SYNE3-205ENST00000557275 DPY19L1Q2PZI1 675 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 UPF1Q92900 1129 aaKnown RBP eCLIP8.81□□□□□ -1
SYNE3-205ENST00000557275 TRPV4Q9HBA0 871 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 FBXO10Q9UK96 956 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 AP2A2O94973 939 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 ZNF484Q5JVG2 852 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 C11orf65Q8NCR3 313 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 FBXO30Q8TB52 745 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 PIGXQ8TBF5 258 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms