RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 TIGD7Q6NT04 549 aaPredicted RBP15.84■□□□□ 0.13
TUBB3-213ENST00000557262 USP53Q70EK8 1073 aa15.84■□□□□ 0.13
TUBB3-213ENST00000557262 TMPRSS9Q7Z410 1059 aa15.84■□□□□ 0.13
TUBB3-213ENST00000557262 ZNF438Q7Z4V0 828 aa15.84■□□□□ 0.13
TUBB3-213ENST00000557262 LUZP1Q86V48 1076 aa15.84■□□□□ 0.13
TUBB3-213ENST00000557262 KCTD6Q8NC69 237 aa15.84■□□□□ 0.13
TUBB3-213ENST00000557262 PTCD2Q8WV60 388 aaKnown RBP15.84■□□□□ 0.13
TUBB3-213ENST00000557262 SCARF2Q96GP6 870 aaPredicted RBP15.84■□□□□ 0.13
TUBB3-213ENST00000557262 SEMA6CQ9H3T2 930 aa15.84■□□□□ 0.13
TUBB3-213ENST00000557262 RDH14Q9HBH5 336 aa15.84■□□□□ 0.13
TUBB3-213ENST00000557262 AMACRQ9UHK6 382 aa15.84■□□□□ 0.13
TUBB3-213ENST00000557262 A0A0J9YYE9 177 aa15.83■□□□□ 0.12
TUBB3-213ENST00000557262 A0A0U1RQS6 177 aa15.83■□□□□ 0.12
TUBB3-213ENST00000557262 AGRPO00253 132 aa15.83■□□□□ 0.12
TUBB3-213ENST00000557262 TRBC1P01850 177 aa15.83■□□□□ 0.12
TUBB3-213ENST00000557262 PYGLP06737 847 aa15.83■□□□□ 0.12
TUBB3-213ENST00000557262 LIPCP11150 499 aa15.83■□□□□ 0.12
TUBB3-213ENST00000557262 ZNF30P17039 623 aa15.83■□□□□ 0.12
TUBB3-213ENST00000557262 GPR3P46089 330 aa15.83■□□□□ 0.12
TUBB3-213ENST00000557262 EPHB1P54762 984 aa15.83■□□□□ 0.12
TUBB3-213ENST00000557262 BIRC2Q13490 618 aa15.83■□□□□ 0.12
TUBB3-213ENST00000557262 DPYSL3Q14195 570 aa15.83■□□□□ 0.12
TUBB3-213ENST00000557262 NR1D2Q14995 579 aa15.83■□□□□ 0.12
TUBB3-213ENST00000557262 PDK2Q15119 407 aa15.83■□□□□ 0.12
TUBB3-213ENST00000557262 TGIF1Q15583 401 aa15.83■□□□□ 0.12
TUBB3-213ENST00000557262 AMZ1Q400G9 498 aa15.83■□□□□ 0.12
TUBB3-213ENST00000557262 MAP9Q49MG5 647 aa15.83■□□□□ 0.12
TUBB3-213ENST00000557262 ANKRD20A8PQ5CZ79 823 aa15.83■□□□□ 0.12
TUBB3-213ENST00000557262 LRRC66Q68CR7 880 aa15.83■□□□□ 0.12
TUBB3-213ENST00000557262 NCBP2-AS2Q69YL0 99 aa15.83■□□□□ 0.12
TUBB3-213ENST00000557262 ALG1LQ6GMV1 187 aa15.83■□□□□ 0.12
TUBB3-213ENST00000557262 SLC30A9Q6PML9 568 aa15.83■□□□□ 0.12
TUBB3-213ENST00000557262 ADAMTSL4Q6UY14 1074 aa15.83■□□□□ 0.12
TUBB3-213ENST00000557262 RFLNAQ6ZTI6 216 aa15.83■□□□□ 0.12
TUBB3-213ENST00000557262 MAP7D3Q8IWC1 876 aa15.83■□□□□ 0.12
TUBB3-213ENST00000557262 NAGSQ8N159 534 aa15.83■□□□□ 0.12
TUBB3-213ENST00000557262 MAML1Q92585 1016 aa15.83■□□□□ 0.12
TUBB3-213ENST00000557262 USP7Q93009 1102 aa15.83■□□□□ 0.12
TUBB3-213ENST00000557262 FATE1Q969F0 183 aa15.83■□□□□ 0.12
TUBB3-213ENST00000557262 AP2M1Q96CW1 435 aa15.83■□□□□ 0.12
TUBB3-213ENST00000557262 TSGA13Q96PP4 275 aa15.83■□□□□ 0.12
TUBB3-213ENST00000557262 SEMA4CQ9C0C4 833 aa15.83■□□□□ 0.12
TUBB3-213ENST00000557262 B3GNT4Q9C0J1 378 aa15.83■□□□□ 0.12
TUBB3-213ENST00000557262 HAUS2Q9NVX0 235 aa15.83■□□□□ 0.12
TUBB3-213ENST00000557262 RBM22Q9NW64 420 aaKnown RBP eCLIP15.83■□□□□ 0.12
TUBB3-213ENST00000557262 AKAP7Q9P0M2 348 aaPredicted RBP15.83■□□□□ 0.12
TUBB3-213ENST00000557262 SEPT10Q9P0V9 454 aa15.83■□□□□ 0.12
TUBB3-213ENST00000557262 CD84Q9UIB8 345 aa15.83■□□□□ 0.12
TUBB3-213ENST00000557262 TMEM98Q9Y2Y6 226 aa15.83■□□□□ 0.12
TUBB3-213ENST00000557262 ST14Q9Y5Y6 855 aa15.83■□□□□ 0.12
TUBB3-213ENST00000557262 ARHGEF17Q96PE2 2063 aaPredicted RBP15.83■□□□□ 0.12
TUBB3-213ENST00000557262 PRAMEF33A0A0G2JMD5 474 aa15.82■□□□□ 0.12
TUBB3-213ENST00000557262 SYCE3A1L190 88 aa15.82■□□□□ 0.12
TUBB3-213ENST00000557262 MFSD11O43934 449 aa15.82■□□□□ 0.12
TUBB3-213ENST00000557262 PRAMEF10O60809 474 aa15.82■□□□□ 0.12
TUBB3-213ENST00000557262 CD1CP29017 333 aa15.82■□□□□ 0.12
TUBB3-213ENST00000557262 ETV5P41161 510 aa15.82■□□□□ 0.12
TUBB3-213ENST00000557262 MAPK10P53779 464 aa15.82■□□□□ 0.12
TUBB3-213ENST00000557262 DSC2Q02487 901 aa15.82■□□□□ 0.12
TUBB3-213ENST00000557262 IHHQ14623 411 aa15.82■□□□□ 0.12
TUBB3-213ENST00000557262 TMEM164Q5U3C3 297 aa15.82■□□□□ 0.12
TUBB3-213ENST00000557262 DOK6Q6PKX4 331 aa15.82■□□□□ 0.12
TUBB3-213ENST00000557262 ZNF574Q6ZN55 896 aaPredicted RBP15.82■□□□□ 0.12
TUBB3-213ENST00000557262 ZNF765Q7L2R6 523 aa15.82■□□□□ 0.12
TUBB3-213ENST00000557262 RAVER1Q8IY67 606 aaKnown RBP15.82■□□□□ 0.12
TUBB3-213ENST00000557262 NRSN1Q8IZ57 195 aa15.82■□□□□ 0.12
TUBB3-213ENST00000557262 ZNF564Q8TBZ8 553 aaPredicted RBP15.82■□□□□ 0.12
TUBB3-213ENST00000557262 SCAMP4Q969E2 229 aa15.82■□□□□ 0.12
TUBB3-213ENST00000557262 MED8Q96G25 268 aa15.82■□□□□ 0.12
TUBB3-213ENST00000557262 SMIM14Q96QK8 99 aa15.82■□□□□ 0.12
TUBB3-213ENST00000557262 CDH19Q9H159 772 aa15.82■□□□□ 0.12
TUBB3-213ENST00000557262 DNPEPQ9ULA0 475 aa15.82■□□□□ 0.12
TUBB3-213ENST00000557262 CHKBQ9Y259 395 aa15.82■□□□□ 0.12
TUBB3-213ENST00000557262 ZNF462Q96JM2 2506 aa15.82■□□□□ 0.12
TUBB3-213ENST00000557262 GOLGA6L19H0YKK7 550 aa15.81■□□□□ 0.12
TUBB3-213ENST00000557262 PPM1DO15297 605 aa15.81■□□□□ 0.12
TUBB3-213ENST00000557262 PROSCO94903 275 aa15.81■□□□□ 0.12
TUBB3-213ENST00000557262 ZIC2O95409 532 aaPredicted RBP15.81■□□□□ 0.12
TUBB3-213ENST00000557262 SOD1P00441 154 aa15.81■□□□□ 0.12
TUBB3-213ENST00000557262 PRLP01236 227 aa15.81■□□□□ 0.12
TUBB3-213ENST00000557262 CD82P27701 267 aa15.81■□□□□ 0.12
TUBB3-213ENST00000557262 ACTR1BP42025 376 aa15.81■□□□□ 0.12
TUBB3-213ENST00000557262 ACTR1AP61163 376 aa15.81■□□□□ 0.12
TUBB3-213ENST00000557262 SQSTM1Q13501 440 aa15.81■□□□□ 0.12
TUBB3-213ENST00000557262 C16orf72Q14CZ0 275 aa15.81■□□□□ 0.12
TUBB3-213ENST00000557262 PYCR3Q53H96 274 aa15.81■□□□□ 0.12
TUBB3-213ENST00000557262 ZFAND4Q86XD8 727 aa15.81■□□□□ 0.12
TUBB3-213ENST00000557262 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.81■□□□□ 0.12
TUBB3-213ENST00000557262 EXD1Q8NHP7 514 aa15.81■□□□□ 0.12
TUBB3-213ENST00000557262 ARRDC2Q8TBH0 407 aa15.81■□□□□ 0.12
TUBB3-213ENST00000557262 PATE1Q8WXA2 126 aa15.81■□□□□ 0.12
TUBB3-213ENST00000557262 OR2M4Q96R27 311 aa15.81■□□□□ 0.12
TUBB3-213ENST00000557262 ZNF670Q9BS34 389 aa15.81■□□□□ 0.12
TUBB3-213ENST00000557262 CTTNBP2NLQ9P2B4 639 aa15.81■□□□□ 0.12
TUBB3-213ENST00000557262 PLEKHM1Q9Y4G2 1056 aa15.81■□□□□ 0.12
TUBB3-213ENST00000557262 PCDHB11Q9Y5F2 797 aa15.81■□□□□ 0.12
TUBB3-213ENST00000557262 COL6A6A6NMZ7 2263 aa15.8■□□□□ 0.12
TUBB3-213ENST00000557262 AHCTF1Q8WYP5 2266 aa15.8■□□□□ 0.12
TUBB3-213ENST00000557262 IGHV5-10-1A0A0J9YXX1 117 aa15.8■□□□□ 0.12
TUBB3-213ENST00000557262 B8ZZF3 427 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms