RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, human

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNE2-223	ENST00000557005	TAS2R13	Q9NYV9	303 aa		4.98	□□□□□ -1.61
SYNE2-223	ENST00000557005	H2AFY2	Q9P0M6	372 aa	Predicted RBP	4.98	□□□□□ -1.61
SYNE2-223	ENST00000557005	TCAF1	Q9Y4C2	921 aa		4.98	□□□□□ -1.61
SYNE2-223	ENST00000557005	RRN3P2	A6NIE6	340 aa		4.98	□□□□□ -1.61
SYNE2-223	ENST00000557005	MATN2	O00339	956 aa		4.98	□□□□□ -1.61
SYNE2-223	ENST00000557005	TFEC	O14948	347 aa	Predicted RBP	4.98	□□□□□ -1.61
SYNE2-223	ENST00000557005	SLC22A2	O15244	555 aa		4.98	□□□□□ -1.61
SYNE2-223	ENST00000557005	EPN2	O95208	641 aa		4.98	□□□□□ -1.61
SYNE2-223	ENST00000557005	MT-CYB	P00156	380 aa	Predicted RBP	4.98	□□□□□ -1.61
SYNE2-223	ENST00000557005	F9	P00740	461 aa		4.98	□□□□□ -1.61
SYNE2-223	ENST00000557005	FABP3	P05413	133 aa		4.98	□□□□□ -1.61
SYNE2-223	ENST00000557005	MLN	P12872	115 aa		4.98	□□□□□ -1.61
SYNE2-223	ENST00000557005	PTPRA	P18433	802 aa		4.98	□□□□□ -1.61
SYNE2-223	ENST00000557005	KRT20	P35900	424 aa		4.98	□□□□□ -1.61
SYNE2-223	ENST00000557005	BCAP31	P51572	246 aa		4.98	□□□□□ -1.61
SYNE2-223	ENST00000557005	CDK18	Q07002	472 aa		4.98	□□□□□ -1.61
SYNE2-223	ENST00000557005	PMS2P3	Q13401	168 aa		4.98	□□□□□ -1.61
SYNE2-223	ENST00000557005	MEP1A	Q16819	746 aa		4.98	□□□□□ -1.61
SYNE2-223	ENST00000557005	ANKS6	Q68DC2	871 aa		4.98	□□□□□ -1.61
SYNE2-223	ENST00000557005	LCLAT1	Q6UWP7	414 aa		4.98	□□□□□ -1.61
SYNE2-223	ENST00000557005	ZNF410	Q86VK4	478 aa		4.98	□□□□□ -1.61
SYNE2-223	ENST00000557005	CIR1	Q86X95	450 aa	Predicted RBP	4.98	□□□□□ -1.61
SYNE2-223	ENST00000557005	SYT12	Q8IV01	421 aa		4.98	□□□□□ -1.61
SYNE2-223	ENST00000557005	DCBLD1	Q8N8Z6	715 aa		4.98	□□□□□ -1.61
SYNE2-223	ENST00000557005	MCFD2	Q8NI22	146 aa		4.98	□□□□□ -1.61
SYNE2-223	ENST00000557005	DQX1	Q8TE96	717 aa	Known RBP	4.98	□□□□□ -1.61
SYNE2-223	ENST00000557005	PPM1M	Q96MI6	270 aa		4.98	□□□□□ -1.61
SYNE2-223	ENST00000557005	OLFM1	Q99784	485 aa		4.98	□□□□□ -1.61
SYNE2-223	ENST00000557005	NPL	Q9BXD5	320 aa	Predicted RBP	4.98	□□□□□ -1.61
SYNE2-223	ENST00000557005	DUSP16	Q9BY84	665 aa		4.98	□□□□□ -1.61
SYNE2-223	ENST00000557005	CLPB	Q9H078	707 aa		4.98	□□□□□ -1.61
SYNE2-223	ENST00000557005	ST6GALNAC4	Q9H4F1	302 aa		4.98	□□□□□ -1.61
SYNE2-223	ENST00000557005	ASB7	Q9H672	318 aa		4.98	□□□□□ -1.61
SYNE2-223	ENST00000557005	REEP1	Q9H902	201 aa		4.98	□□□□□ -1.61
SYNE2-223	ENST00000557005	EIF2B3	Q9NR50	452 aa	Known RBP	4.98	□□□□□ -1.61
SYNE2-223	ENST00000557005	MTRR	Q9UBK8	725 aa		4.98	□□□□□ -1.61
SYNE2-223	ENST00000557005	SPAST	Q9UBP0	616 aa		4.98	□□□□□ -1.61
SYNE2-223	ENST00000557005	CDH9	Q9ULB4	789 aa		4.98	□□□□□ -1.61
SYNE2-223	ENST00000557005	ADM5	C9JUS6	153 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005		H3BNH8	94 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	SLC28A1	O00337	649 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	RNASEH2A	O75792	299 aa	Known RBP	4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	BCAS2	O75934	225 aa	Predicted RBP	4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	GOT2	P00505	430 aa	Known RBP	4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	RHOC	P08134	193 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	MAGEA10	P43363	369 aa	Predicted RBP	4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	RAB14	P61106	215 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	TRIM32	Q13049	653 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	QPRT	Q15274	297 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	TAB1	Q15750	504 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	SOWAHA	Q2M3V2	549 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	THOC7	Q6I9Y2	204 aa	Known RBP	4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	TMEM53	Q6P2H8	277 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	POTEH	Q6S545	545 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	AFTPH	Q6ULP2	937 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	PIGZ	Q86VD9	579 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	CLYBL	Q8N0X4	340 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	WDTC1	Q8N5D0	677 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	FNDC8	Q8TC99	324 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	CANT1	Q8WVQ1	401 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	TWNK	Q96RR1	684 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	SYT11	Q9BT88	431 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	SPRTN	Q9H040	489 aa	Predicted RBP	4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	ELOVL6	Q9H5J4	265 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	ACTR8	Q9H981	624 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	DTL	Q9NZJ0	730 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	SYNPO2	Q9UMS6	1093 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	PDE10A	Q9Y233	779 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	EFR3B	Q9Y2G0	817 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	KIF13B	Q9NQT8	1826 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	RREB1	Q92766	1687 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	NEMP2	A6NFY4	417 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005		H3BRB1	525 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	MDM4	O15151	490 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	HOXC6	P09630	235 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	NKX2-5	P52952	324 aa	Predicted RBP	4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	OAZ1	P54368	228 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	SP2	Q02086	613 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	NIPAL4	Q0D2K0	466 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	ZNF177	Q13360	481 aa	Predicted RBP	4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	IL18R1	Q13478	541 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	MFSD10	Q14728	455 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	ACAP2	Q15057	778 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	MED22	Q15528	200 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	NDUFA5	Q16718	116 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	ZFP69	Q49AA0	526 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	ZCCHC8	Q6NZY4	707 aa	Known RBP	4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	KLHL35	Q6PF15	583 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	CASP12	Q6UXS9	341 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	AHSA2	Q719I0	299 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	IFNLR1	Q8IU57	520 aa	Predicted RBP	4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	DCP1B	Q8IZD4	617 aa	Known RBP	4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	SHKBP1	Q8TBC3	707 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	TMBIM1	Q969X1	311 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	KATNAL1	Q9BW62	490 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	PDGFD	Q9GZP0	370 aa	Predicted RBP	4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	SPATC1L	Q9H0A9	340 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	WDR70	Q9NW82	654 aa		4.97	□□□□□ -1.61
SYNE2-223	ENST00000557005	IFT80	Q9P2H3	777 aa	Predicted RBP	4.97	□□□□□ -1.61

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