RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 ZNF135P52742 658 aaPredicted RBP11.37□□□□□ -0.59
SRP54-213ENST00000556994 DSC2Q02487 901 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 ZNF33AQ06730 810 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 OR4D1Q15615 310 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 ZIK1Q3SY52 487 aaPredicted RBP11.37□□□□□ -0.59
SRP54-213ENST00000556994 TBPL2Q6SJ96 375 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 KDELC1Q6UW63 502 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 DHRSXQ8N5I4 330 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 TRPV3Q8NET8 790 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 HASPINQ8TF76 798 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 SEPT8Q92599 483 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 CASP10Q92851 521 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 PABPC5Q96DU9 382 aaKnown RBP11.37□□□□□ -0.59
SRP54-213ENST00000556994 CDCA5Q96FF9 252 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 TBATAQ96M53 351 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 TRMOQ9BU70 441 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 TRIM15Q9C019 465 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 ZNHIT2Q9UHR6 403 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 PTBP2Q9UKA9 531 aaKnown RBP11.37□□□□□ -0.59
SRP54-213ENST00000556994 DOLKQ9UPQ8 538 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 MIA3Q5JRA6 1907 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 BBIP1A8MTZ0 92 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 RASAL1O95294 804 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 CD1DP15813 335 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 CCR1P32246 355 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 GSK3BP49841 420 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 CDC42EP1Q00587 391 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 SLC10A7Q0GE19 358 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 NFYCQ13952 458 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 SLC14A2Q15849 920 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 PYCR3Q53H96 274 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 CYBRD1Q53TN4 286 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 PAGE3Q5JUK9 113 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 LCN8Q6JVE9 175 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 ZNF549Q6P9A3 640 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 ABRAXAS1Q6UWZ7 409 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 ZNF354CQ86Y25 554 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 PHYKPLQ8IUZ5 450 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 CCDC117Q8IWD4 279 aaPredicted RBP11.37□□□□□ -0.59
SRP54-213ENST00000556994 TBC1D15Q8TC07 691 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 VPS50Q96JG6 964 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 CATSPERBQ9H7T0 1116 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 SEMA4BQ9NPR2 832 aaPredicted RBP11.37□□□□□ -0.59
SRP54-213ENST00000556994 SLC38A7Q9NVC3 462 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 POLG2Q9UHN1 485 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 PCDHA9Q9Y5H5 950 aa11.37□□□□□ -0.59
SRP54-213ENST00000556994 E9PAM4 449 aa11.36□□□□□ -0.59
SRP54-213ENST00000556994 J3QRK9 145 aa11.36□□□□□ -0.59
SRP54-213ENST00000556994 IRAK2O43187 625 aa11.36□□□□□ -0.59
SRP54-213ENST00000556994 PIRTP0C851 137 aa11.36□□□□□ -0.59
SRP54-213ENST00000556994 PRSS56P0CW18 603 aa11.36□□□□□ -0.59
SRP54-213ENST00000556994 ZNF182P17025 639 aaPredicted RBP11.36□□□□□ -0.59
SRP54-213ENST00000556994 ELK4P28324 431 aa11.36□□□□□ -0.59
SRP54-213ENST00000556994 HMOX2P30519 316 aa11.36□□□□□ -0.59
SRP54-213ENST00000556994 TIAL1Q01085 375 aaKnown RBP eCLIP11.36□□□□□ -0.596e-7■■■■□ 24.2
SRP54-213ENST00000556994 TIGD5Q53EQ6 642 aa11.36□□□□□ -0.59
SRP54-213ENST00000556994 OTUD3Q5T2D3 398 aaPredicted RBP11.36□□□□□ -0.59
SRP54-213ENST00000556994 ARTNQ5T4W7 220 aa11.36□□□□□ -0.59
SRP54-213ENST00000556994 SPRED1Q7Z699 444 aa11.36□□□□□ -0.59
SRP54-213ENST00000556994 TANKQ92844 425 aa11.36□□□□□ -0.59
SRP54-213ENST00000556994 FBXL8Q96CD0 374 aa11.36□□□□□ -0.59
SRP54-213ENST00000556994 RTP3Q9BQQ7 232 aa11.36□□□□□ -0.59
SRP54-213ENST00000556994 ALG2Q9H553 416 aa11.36□□□□□ -0.59
SRP54-213ENST00000556994 GID8Q9NWU2 228 aa11.36□□□□□ -0.59
SRP54-213ENST00000556994 SMPD3Q9NY59 655 aaPredicted RBP11.36□□□□□ -0.59
SRP54-213ENST00000556994 CDH9Q9ULB4 789 aa11.36□□□□□ -0.59
SRP54-213ENST00000556994 BRCA2P51587 3418 aa11.36□□□□□ -0.59
SRP54-213ENST00000556994 MBLAC1A4D2B0 266 aaPredicted RBP11.36□□□□□ -0.59
SRP54-213ENST00000556994 ASPDHA6ND91 283 aa11.36□□□□□ -0.59
SRP54-213ENST00000556994 WISP3O95389 354 aaPredicted RBP11.36□□□□□ -0.59
SRP54-213ENST00000556994 HOXD8P13378 290 aaPredicted RBP11.36□□□□□ -0.59
SRP54-213ENST00000556994 MATN1P21941 496 aa11.36□□□□□ -0.59
SRP54-213ENST00000556994 UGT1A1P22309 533 aa11.36□□□□□ -0.59
SRP54-213ENST00000556994 UGT1A4P22310 534 aa11.36□□□□□ -0.59
SRP54-213ENST00000556994 EEF1B2P24534 225 aaKnown RBP11.36□□□□□ -0.59
SRP54-213ENST00000556994 UGT1A3P35503 534 aa11.36□□□□□ -0.59
SRP54-213ENST00000556994 UGT1A5P35504 534 aa11.36□□□□□ -0.59
SRP54-213ENST00000556994 CAPGP40121 348 aa11.36□□□□□ -0.59
SRP54-213ENST00000556994 RPS9P46781 194 aaKnown RBP11.36□□□□□ -0.59
SRP54-213ENST00000556994 LIPEQ05469 1076 aa11.36□□□□□ -0.59
SRP54-213ENST00000556994 CACNB2Q08289 660 aaPredicted RBP11.36□□□□□ -0.59
SRP54-213ENST00000556994 TRAF2Q12933 501 aa11.36□□□□□ -0.59
SRP54-213ENST00000556994 BNIP2Q12982 314 aa11.36□□□□□ -0.59
SRP54-213ENST00000556994 TMTC4Q5T4D3 741 aa11.36□□□□□ -0.59
SRP54-213ENST00000556994 IRAK1BP1Q5VVH5 260 aa11.36□□□□□ -0.59
SRP54-213ENST00000556994 TMEM125Q96AQ2 219 aa11.36□□□□□ -0.59
SRP54-213ENST00000556994 KCTD14Q9BQ13 255 aaPredicted RBP11.36□□□□□ -0.59
SRP54-213ENST00000556994 MTG1Q9BT17 334 aaPredicted RBP11.36□□□□□ -0.59
SRP54-213ENST00000556994 SEZ6LQ9BYH1 1024 aa11.36□□□□□ -0.59
SRP54-213ENST00000556994 SLC25A51Q9H1U9 297 aa11.36□□□□□ -0.59
SRP54-213ENST00000556994 NOL6Q9H6R4 1146 aaKnown RBP11.36□□□□□ -0.59
SRP54-213ENST00000556994 CSNK1G1Q9HCP0 422 aa11.36□□□□□ -0.59
SRP54-213ENST00000556994 SLC52A3Q9NQ40 469 aa11.36□□□□□ -0.59
SRP54-213ENST00000556994 CDH7Q9ULB5 785 aa11.36□□□□□ -0.59
SRP54-213ENST00000556994 HS3ST4Q9Y661 456 aa11.36□□□□□ -0.59
SRP54-213ENST00000556994 PTCH2Q9Y6C5 1203 aa11.36□□□□□ -0.59
SRP54-213ENST00000556994 TRIM64A6NGJ6 449 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 NCF1BA6NI72 391 aaPredicted RBP11.35□□□□□ -0.59
SRP54-213ENST00000556994 NCF1CA8MVU1 366 aaPredicted RBP11.35□□□□□ -0.59
SRP54-213ENST00000556994 CLASP2O75122 1294 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms