RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 TEX26Q8N6G2 289 aa7.33□□□□□ -1.24
SCFD1-222ENST00000556768 ARL10Q8N8L6 244 aa7.33□□□□□ -1.24
SCFD1-222ENST00000556768 FAM46DQ8NEK8 389 aa7.33□□□□□ -1.24
SCFD1-222ENST00000556768 CCHCR1Q8TD31 782 aa7.33□□□□□ -1.24
SCFD1-222ENST00000556768 FGF11Q92914 225 aa7.33□□□□□ -1.24
SCFD1-222ENST00000556768 FATE1Q969F0 183 aa7.33□□□□□ -1.24
SCFD1-222ENST00000556768 RNF157Q96PX1 679 aa7.33□□□□□ -1.24
SCFD1-222ENST00000556768 CHP1Q99653 195 aa7.33□□□□□ -1.24
SCFD1-222ENST00000556768 BOCQ9BWV1 1114 aa7.33□□□□□ -1.24
SCFD1-222ENST00000556768 PACSIN1Q9BY11 444 aa7.33□□□□□ -1.24
SCFD1-222ENST00000556768 BRD8Q9H0E9 1235 aa7.33□□□□□ -1.24
SCFD1-222ENST00000556768 DPEP2Q9H4A9 486 aa7.33□□□□□ -1.24
SCFD1-222ENST00000556768 SPTLC3Q9NUV7 552 aa7.33□□□□□ -1.24
SCFD1-222ENST00000556768 GPR34Q9UPC5 381 aa7.33□□□□□ -1.24
SCFD1-222ENST00000556768 PKD1L2Q7Z442 2459 aa7.33□□□□□ -1.24
SCFD1-222ENST00000556768 ZNF487B1APH4 448 aa7.32□□□□□ -1.24
SCFD1-222ENST00000556768 TMX2-CTNND1H3BSU7 103 aa7.32□□□□□ -1.24
SCFD1-222ENST00000556768 TAF4O00268 1085 aa7.32□□□□□ -1.24
SCFD1-222ENST00000556768 APOL1O14791 398 aa7.32□□□□□ -1.24
SCFD1-222ENST00000556768 MFSD11O43934 449 aa7.32□□□□□ -1.24
SCFD1-222ENST00000556768 USP12O75317 370 aa7.32□□□□□ -1.24
SCFD1-222ENST00000556768 HEXIM1O94992 359 aaKnown RBP7.32□□□□□ -1.24
SCFD1-222ENST00000556768 PEX11BO96011 259 aa7.32□□□□□ -1.24
SCFD1-222ENST00000556768 JCHAINP01591 159 aa7.32□□□□□ -1.24
SCFD1-222ENST00000556768 CAPNS1P04632 268 aa7.32□□□□□ -1.24
SCFD1-222ENST00000556768 GIMD1P0DJR0 217 aa7.32□□□□□ -1.24
SCFD1-222ENST00000556768 TNNT1P13805 278 aa7.32□□□□□ -1.24
SCFD1-222ENST00000556768 ZNF30P17039 623 aa7.32□□□□□ -1.24
SCFD1-222ENST00000556768 RBMS1P29558 406 aaKnown RBP7.32□□□□□ -1.24
SCFD1-222ENST00000556768 CYLC1P35663 651 aaPredicted RBP7.32□□□□□ -1.24
SCFD1-222ENST00000556768 MAGEA1P43355 309 aa7.32□□□□□ -1.24
SCFD1-222ENST00000556768 GPR1P46091 355 aa7.32□□□□□ -1.24
SCFD1-222ENST00000556768 ARSEP51690 589 aa7.32□□□□□ -1.24
SCFD1-222ENST00000556768 KIAA1024LP59773 190 aa7.32□□□□□ -1.24
SCFD1-222ENST00000556768 RPL26P61254 145 aaKnown RBP7.32□□□□□ -1.24
SCFD1-222ENST00000556768 AP1B1Q10567 949 aa7.32□□□□□ -1.24
SCFD1-222ENST00000556768 ILF3Q12906 894 aaKnown RBP eCLIP7.32□□□□□ -1.24
SCFD1-222ENST00000556768 SPIDRQ14159 915 aa7.32□□□□□ -1.24
SCFD1-222ENST00000556768 TFDP2Q14188 446 aa7.32□□□□□ -1.24
SCFD1-222ENST00000556768 ALG11Q2TAA5 492 aa7.32□□□□□ -1.24
SCFD1-222ENST00000556768 TPRG1LQ5T0D9 272 aa7.32□□□□□ -1.24
SCFD1-222ENST00000556768 RAET1GQ6H3X3 334 aa7.32□□□□□ -1.24
SCFD1-222ENST00000556768 RBM44Q6ZP01 1051 aaKnown RBP7.32□□□□□ -1.24
SCFD1-222ENST00000556768 VSIG1Q86XK7 387 aa7.32□□□□□ -1.24
SCFD1-222ENST00000556768 CCDC13Q8IYE1 715 aa7.32□□□□□ -1.24
SCFD1-222ENST00000556768 CCDC170Q8IYT3 715 aa7.32□□□□□ -1.24
SCFD1-222ENST00000556768 PGBD5Q8N414 524 aa7.32□□□□□ -1.24
SCFD1-222ENST00000556768 KIAA1524Q8TCG1 905 aa7.32□□□□□ -1.24
SCFD1-222ENST00000556768 HNRNPLLQ8WVV9 542 aaKnown RBP7.32□□□□□ -1.24
SCFD1-222ENST00000556768 FUBP1Q96AE4 644 aaKnown RBP7.32□□□□□ -1.24
SCFD1-222ENST00000556768 HDAC11Q96DB2 347 aa7.32□□□□□ -1.24
SCFD1-222ENST00000556768 RBM15Q96T37 977 aaKnown RBP eCLIP7.32□□□□□ -1.24
SCFD1-222ENST00000556768 FERMT1Q9BQL6 677 aa7.32□□□□□ -1.24
SCFD1-222ENST00000556768 TCEAL2Q9H3H9 227 aaPredicted RBP7.32□□□□□ -1.24
SCFD1-222ENST00000556768 SYNDIG1Q9H7V2 258 aa7.32□□□□□ -1.24
SCFD1-222ENST00000556768 CYP4F12Q9HCS2 524 aa7.32□□□□□ -1.24
SCFD1-222ENST00000556768 SIRPGQ9P1W8 387 aa7.32□□□□□ -1.24
SCFD1-222ENST00000556768 RPL26L1Q9UNX3 145 aaKnown RBP7.32□□□□□ -1.24
SCFD1-222ENST00000556768 ACACAQ13085 2346 aa7.32□□□□□ -1.24
SCFD1-222ENST00000556768 TMEM202A6NGA9 273 aa7.31□□□□□ -1.24
SCFD1-222ENST00000556768 CSO75390 466 aaKnown RBP7.31□□□□□ -1.24
SCFD1-222ENST00000556768 MAP3K6O95382 1288 aa7.31□□□□□ -1.24
SCFD1-222ENST00000556768 MYCLP1P12525 358 aaPredicted RBP7.31□□□□□ -1.24
SCFD1-222ENST00000556768 MYF5P13349 255 aa7.31□□□□□ -1.24
SCFD1-222ENST00000556768 CTPS1P17812 591 aa7.31□□□□□ -1.24
SCFD1-222ENST00000556768 ATF4P18848 351 aaPredicted RBP7.31□□□□□ -1.24
SCFD1-222ENST00000556768 ETV3P41162 512 aa7.31□□□□□ -1.24
SCFD1-222ENST00000556768 ABCG1P45844 678 aa7.31□□□□□ -1.24
SCFD1-222ENST00000556768 NR2C2P49116 596 aa7.31□□□□□ -1.24
SCFD1-222ENST00000556768 CLDN6P56747 220 aa7.31□□□□□ -1.24
SCFD1-222ENST00000556768 TAS2R40P59535 323 aa7.31□□□□□ -1.24
SCFD1-222ENST00000556768 GBE1Q04446 702 aa7.31□□□□□ -1.24
SCFD1-222ENST00000556768 TRAF2Q12933 501 aa7.31□□□□□ -1.24
SCFD1-222ENST00000556768 RALGDSQ12967 914 aa7.31□□□□□ -1.24
SCFD1-222ENST00000556768 TCEA2Q15560 299 aa7.31□□□□□ -1.24
SCFD1-222ENST00000556768 CNGA3Q16281 694 aa7.31□□□□□ -1.24
SCFD1-222ENST00000556768 MEI1Q5TIA1 1274 aa7.31□□□□□ -1.24
SCFD1-222ENST00000556768 GUSBP11Q6P575 273 aa7.31□□□□□ -1.24
SCFD1-222ENST00000556768 SARM1Q6SZW1 724 aa7.31□□□□□ -1.24
SCFD1-222ENST00000556768 Q6ZVL8 140 aa7.31□□□□□ -1.24
SCFD1-222ENST00000556768 RFX6Q8HWS3 928 aa7.31□□□□□ -1.24
SCFD1-222ENST00000556768 SLC35F3Q8IY50 421 aa7.31□□□□□ -1.24
SCFD1-222ENST00000556768 RAVER1Q8IY67 606 aaKnown RBP7.31□□□□□ -1.24
SCFD1-222ENST00000556768 ARL14Q8N4G2 192 aa7.31□□□□□ -1.24
SCFD1-222ENST00000556768 PLA2G15Q8NCC3 412 aa7.31□□□□□ -1.24
SCFD1-222ENST00000556768 RAPGEF5Q92565 580 aa7.31□□□□□ -1.24
SCFD1-222ENST00000556768 MAML1Q92585 1016 aa7.31□□□□□ -1.24
SCFD1-222ENST00000556768 FAF2Q96CS3 445 aa7.31□□□□□ -1.24
SCFD1-222ENST00000556768 AP2M1Q96CW1 435 aa7.31□□□□□ -1.24
SCFD1-222ENST00000556768 DTD2Q96FN9 168 aa7.31□□□□□ -1.24
SCFD1-222ENST00000556768 COQ10AQ96MF6 247 aa7.31□□□□□ -1.24
SCFD1-222ENST00000556768 CCDC3Q9BQI4 270 aa7.31□□□□□ -1.24
SCFD1-222ENST00000556768 GSDMCQ9BYG8 508 aa7.31□□□□□ -1.24
SCFD1-222ENST00000556768 STRADBQ9C0K7 418 aa7.31□□□□□ -1.24
SCFD1-222ENST00000556768 CLPBQ9H078 707 aa7.31□□□□□ -1.24
SCFD1-222ENST00000556768 CARS2Q9HA77 564 aaKnown RBP7.31□□□□□ -1.24
SCFD1-222ENST00000556768 PCDH9Q9HC56 1237 aa7.31□□□□□ -1.24
SCFD1-222ENST00000556768 THSD1Q9NS62 852 aa7.31□□□□□ -1.24
SCFD1-222ENST00000556768 DTLQ9NZJ0 730 aa7.31□□□□□ -1.24
SCFD1-222ENST00000556768 NENFQ9UMX5 172 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms