RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 MROH6A6NGR9 719 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 CFIP05156 583 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 HADHAP40939 763 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 MAGEA3P43357 314 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 RACK1P63244 317 aaKnown RBP13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 PDIA2Q13087 525 aaKnown RBP13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 AGERQ15109 404 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 SKIDA1Q1XH10 827 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 ZDHHC24Q6UX98 284 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 GCNT7Q6ZNI0 430 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 SYT12Q8IV01 421 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 IFT20Q8IY31 132 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 AGGF1Q8N302 714 aaeCLIP13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 TMEM145Q8NBT3 493 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 DENND6BQ8NEG7 585 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 STYXQ8WUJ0 223 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 STAMBPL1Q96FJ0 436 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 ARRDC1-AS1Q9H2J1 176 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 IL26Q9NPH9 171 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 KCTD5Q9NXV2 234 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 PILRBQ9UKJ0 227 aa13.99□□□□□ -0.17
VIPAS39-208ENST00000556412 WDFY4Q6ZS81 3184 aa13.98□□□□□ -0.17
VIPAS39-208ENST00000556412 A6NNZ2 444 aa13.98□□□□□ -0.17
VIPAS39-208ENST00000556412 INPP4BO15327 924 aa13.98□□□□□ -0.17
VIPAS39-208ENST00000556412 PPFIA2O75334 1257 aa13.98□□□□□ -0.17
VIPAS39-208ENST00000556412 PRAMEF1O95521 474 aa13.98□□□□□ -0.17
VIPAS39-208ENST00000556412 NMBRP28336 390 aa13.98□□□□□ -0.17
VIPAS39-208ENST00000556412 CD38P28907 300 aa13.98□□□□□ -0.17
VIPAS39-208ENST00000556412 NBL1P41271 181 aa13.98□□□□□ -0.17
VIPAS39-208ENST00000556412 CSNK1EP49674 416 aaKnown RBP13.98□□□□□ -0.17
VIPAS39-208ENST00000556412 ZDHHC20Q5W0Z9 365 aa13.98□□□□□ -0.17
VIPAS39-208ENST00000556412 LAIR1Q6GTX8 287 aa13.98□□□□□ -0.17
VIPAS39-208ENST00000556412 ESRP1Q6NXG1 681 aaKnown RBP13.98□□□□□ -0.17
VIPAS39-208ENST00000556412 PNCKQ6P2M8 343 aa13.98□□□□□ -0.17
VIPAS39-208ENST00000556412 MICALCLQ6ZW33 695 aa13.98□□□□□ -0.17
VIPAS39-208ENST00000556412 CENPUQ71F23 418 aa13.98□□□□□ -0.17
VIPAS39-208ENST00000556412 ZNF765Q7L2R6 523 aa13.98□□□□□ -0.17
VIPAS39-208ENST00000556412 NLRP9Q7RTR0 991 aa13.98□□□□□ -0.17
VIPAS39-208ENST00000556412 ANKMY2Q8IV38 441 aa13.98□□□□□ -0.17
VIPAS39-208ENST00000556412 SEC14L1Q92503 715 aa13.98□□□□□ -0.17
VIPAS39-208ENST00000556412 PLEKHG4BQ96PX9 1271 aa13.98□□□□□ -0.17
VIPAS39-208ENST00000556412 WDR26Q9H7D7 661 aa13.98□□□□□ -0.17
VIPAS39-208ENST00000556412 SUDS3Q9H7L9 328 aaPredicted RBP13.98□□□□□ -0.17
VIPAS39-208ENST00000556412 NLE1Q9NVX2 485 aaPredicted RBP13.98□□□□□ -0.17
VIPAS39-208ENST00000556412 SUSD2Q9UGT4 822 aa13.98□□□□□ -0.17
VIPAS39-208ENST00000556412 GMEB2Q9UKD1 530 aa13.98□□□□□ -0.17
VIPAS39-208ENST00000556412 CHMP2BQ9UQN3 213 aa13.98□□□□□ -0.17
VIPAS39-208ENST00000556412 A0A1B0GTW7 788 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 GPR39O43194 453 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 TSHRP16473 764 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 MC4RP32245 332 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 MPLP40238 635 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 ELK3P41970 407 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 CARSP49589 748 aaKnown RBP13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 ARSDP51689 593 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 AFF3P51826 1226 aaKnown RBP13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 C21orf59P57076 290 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 DCDC1P59894 354 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 PRAMEP78395 509 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 CHRNA6Q15825 494 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 HENMT1Q5T8I9 393 aaKnown RBP13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 Q6ZSR6 202 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 HEATR4Q86WZ0 1026 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 ZBED8Q8IZ13 594 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 OR13H1Q8NG92 308 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 OR6P1Q8NGX9 317 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 PTCD2Q8WV60 388 aaKnown RBP13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 UBXN4Q92575 508 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 ZNF669Q96BR6 464 aaPredicted RBP13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 MFSD3Q96ES6 412 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 CFAP36Q96G28 342 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 LOXL4Q96JB6 756 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 SIGLEC10Q96LC7 697 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 BMFQ96LC9 184 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 TBATAQ96M53 351 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 KIFC1Q9BW19 673 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 CDH19Q9H159 772 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 SMOC1Q9H4F8 434 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 SAYSD1Q9NPB0 183 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 SOX13Q9UN79 622 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 SLC30A1Q9Y6M5 507 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 RPS6KL1Q9Y6S9 549 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 ZNF318Q5VUA4 2279 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 OR51F1A6NGY5 319 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 FADS2P1A8MWK0 482 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 UGT1A9O60656 530 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 EPN2O95208 641 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 LMNAP02545 664 aaKnown RBP13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 THEGLP0DJG4 465 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 UGT1A6P19224 532 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 UGT1A1P22309 533 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 UGT1A4P22310 534 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 UGT1A3P35503 534 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 UGT1A5P35504 534 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 THOP1P52888 689 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 DPTQ07507 201 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 PDE1CQ14123 709 aaPredicted RBP13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 TEAD4Q15561 434 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 ZRANB3Q5FWF4 1079 aa13.97□□□□□ -0.17
VIPAS39-208ENST00000556412 KYAT3Q6YP21 454 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms