RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 SHBQ15464 509 aa3.48□□□□□ -1.85
SRP54-209ENST00000555746 PRTGQ2VWP7 1150 aa3.48□□□□□ -1.85
SRP54-209ENST00000555746 ODF3L2Q3SX64 289 aa3.48□□□□□ -1.85
SRP54-209ENST00000555746 LEXMQ3ZCV2 418 aa3.48□□□□□ -1.85
SRP54-209ENST00000555746 CCDC30Q5VVM6 783 aa3.48□□□□□ -1.85
SRP54-209ENST00000555746 CST9Q5W186 159 aa3.48□□□□□ -1.85
SRP54-209ENST00000555746 ZKSCAN2Q63HK3 967 aa3.48□□□□□ -1.85
SRP54-209ENST00000555746 HAUS3Q68CZ6 603 aa3.48□□□□□ -1.85
SRP54-209ENST00000555746 MZT2BQ6NZ67 158 aa3.48□□□□□ -1.85
SRP54-209ENST00000555746 CPLX2Q6PUV4 134 aaKnown RBP3.48□□□□□ -1.85
SRP54-209ENST00000555746 Q7L0L9 218 aa3.48□□□□□ -1.85
SRP54-209ENST00000555746 PXKQ7Z7A4 578 aa3.48□□□□□ -1.85
SRP54-209ENST00000555746 CPLX4Q7Z7G2 160 aa3.48□□□□□ -1.85
SRP54-209ENST00000555746 PIM3Q86V86 326 aa3.48□□□□□ -1.85
SRP54-209ENST00000555746 SFTPA2Q8IWL1 248 aa3.48□□□□□ -1.85
SRP54-209ENST00000555746 CCDC105Q8IYK2 499 aa3.48□□□□□ -1.85
SRP54-209ENST00000555746 C7orf57Q8NEG2 295 aa3.48□□□□□ -1.85
SRP54-209ENST00000555746 GJC3Q8NFK1 279 aa3.48□□□□□ -1.85
SRP54-209ENST00000555746 FAM149B1Q96BN6 582 aa3.48□□□□□ -1.85
SRP54-209ENST00000555746 OTULINQ96BN8 352 aa3.48□□□□□ -1.85
SRP54-209ENST00000555746 PERPQ96FX8 193 aa3.48□□□□□ -1.85
SRP54-209ENST00000555746 HMCESQ96FZ2 354 aa3.48□□□□□ -1.85
SRP54-209ENST00000555746 POLDIP3Q9BY77 421 aaKnown RBP3.48□□□□□ -1.85
SRP54-209ENST00000555746 SLC29A3Q9BZD2 475 aa3.48□□□□□ -1.85
SRP54-209ENST00000555746 PLAC1Q9HBJ0 212 aa3.48□□□□□ -1.85
SRP54-209ENST00000555746 KRCC1Q9NPI7 259 aaPredicted RBP3.48□□□□□ -1.85
SRP54-209ENST00000555746 SMYD2Q9NRG4 433 aa3.48□□□□□ -1.85
SRP54-209ENST00000555746 TBC1D22BQ9NU19 505 aa3.48□□□□□ -1.85
SRP54-209ENST00000555746 BLOC1S4Q9NUP1 217 aa3.48□□□□□ -1.85
SRP54-209ENST00000555746 INTS6Q9UL03 887 aaKnown RBP3.48□□□□□ -1.85
SRP54-209ENST00000555746 PSAT1Q9Y617 370 aa3.48□□□□□ -1.85
SRP54-209ENST00000555746 CAPN7Q9Y6W3 813 aa3.48□□□□□ -1.85
SRP54-209ENST00000555746 PIAS3Q9Y6X2 628 aa3.48□□□□□ -1.85
SRP54-209ENST00000555746 TRIP12Q14669 1992 aaPredicted RBP3.48□□□□□ -1.85
SRP54-209ENST00000555746 UBR3Q6ZT12 1888 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 A0A1W2PRG0 241 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 TYW5A2RUC4 315 aaKnown RBP3.47□□□□□ -1.85
SRP54-209ENST00000555746 LRRC53A6NM62 1247 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 MS4A18H0YCH9 400 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 I6L893 689 aaPredicted RBP3.47□□□□□ -1.85
SRP54-209ENST00000555746 IFNL4K9M1U5 179 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 SEC31AO94979 1220 aaKnown RBP3.47□□□□□ -1.85
SRP54-209ENST00000555746 LCATP04180 440 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 CDH2P19022 906 aaPredicted RBP3.47□□□□□ -1.85
SRP54-209ENST00000555746 CHATP28329 748 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 COPB2P35606 906 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 RFX2P48378 723 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 GNAQP50148 359 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 CLCN5P51795 746 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 RARSP54136 660 aaKnown RBP3.47□□□□□ -1.85
SRP54-209ENST00000555746 OLR1P78380 273 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 TMEM115Q12893 351 aaPredicted RBP3.47□□□□□ -1.85
SRP54-209ENST00000555746 GRIK3Q13003 919 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 CAPSQ13938 189 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 RUNX2Q13950 521 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 EIF4A2Q14240 407 aaKnown RBP3.47□□□□□ -1.85
SRP54-209ENST00000555746 SOWAHAQ2M3V2 549 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 ZNF284Q2VY69 593 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 ESCO2Q56NI9 601 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 PRAMEF19Q5SWL8 479 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 DLK2Q6UY11 383 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 COLCA1Q6ZS62 124 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 SMIM5Q71RC9 77 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 IRF2BP2Q7Z5L9 587 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 PCGF5Q86SE9 256 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 LURAP1LQ8IV03 231 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 DHX40Q8IX18 779 aaKnown RBP3.47□□□□□ -1.85
SRP54-209ENST00000555746 TMEM199Q8N511 208 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 KCNG4Q8TDN1 519 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 CREB3L4Q8TEY5 395 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 INTS12Q96CB8 462 aaKnown RBP3.47□□□□□ -1.85
SRP54-209ENST00000555746 ZNF48Q96MX3 618 aaPredicted RBP3.47□□□□□ -1.85
SRP54-209ENST00000555746 SLITRK1Q96PX8 696 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 GFM1Q96RP9 751 aaKnown RBP3.47□□□□□ -1.85
SRP54-209ENST00000555746 MXRA8Q9BRK3 442 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 CHCHD6Q9BRQ6 235 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 ITPAQ9BY32 194 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 CATSPERBQ9H7T0 1116 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 SCPEP1Q9HB40 452 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 ASAH2Q9NR71 780 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 RNF186Q9NXI6 227 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 IL36RNQ9UBH0 155 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 SLCO3A1Q9UIG8 710 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 HAO1Q9UJM8 370 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 FAM96BQ9Y3D0 163 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 NFE2L3Q9Y4A8 694 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 SRPRBQ9Y5M8 271 aaKnown RBP3.47□□□□□ -1.85
SRP54-209ENST00000555746 GPRASP1Q5JY77 1395 aa3.47□□□□□ -1.85
SRP54-209ENST00000555746 UTYO14607 1347 aa3.46□□□□□ -1.85
SRP54-209ENST00000555746 KIF7Q2M1P5 1343 aa3.46□□□□□ -1.85
SRP54-209ENST00000555746 ZNF521Q96K83 1311 aa3.46□□□□□ -1.85
SRP54-209ENST00000555746 SETXQ7Z333 2677 aaKnown RBP3.46□□□□□ -1.86
SRP54-209ENST00000555746 A0A1W2PQF6 199 aa3.46□□□□□ -1.86
SRP54-209ENST00000555746 WNT9BO14905 357 aa3.46□□□□□ -1.86
SRP54-209ENST00000555746 SEC14L5O43304 696 aa3.46□□□□□ -1.86
SRP54-209ENST00000555746 LIASO43766 372 aa3.46□□□□□ -1.86
SRP54-209ENST00000555746 ZNF500O60304 480 aaPredicted RBP3.46□□□□□ -1.86
SRP54-209ENST00000555746 ATP2C2O75185 946 aa3.46□□□□□ -1.86
SRP54-209ENST00000555746 DDNO94850 711 aaPredicted RBP3.46□□□□□ -1.86
SRP54-209ENST00000555746 MMP2P08253 660 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms