RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 NRSN1Q8IZ57 195 aa24.36■■□□□ 1.49
PRKCH-216ENST00000555542 TC2NQ8N9U0 490 aa24.36■■□□□ 1.49
PRKCH-216ENST00000555542 WDR36Q8NI36 951 aaKnown RBP24.36■■□□□ 1.49
PRKCH-216ENST00000555542 CCHCR1Q8TD31 782 aa24.36■■□□□ 1.49
PRKCH-216ENST00000555542 AGAP3Q96P47 875 aa24.36■■□□□ 1.49
PRKCH-216ENST00000555542 MLPHQ9BV36 600 aaPredicted RBP24.36■■□□□ 1.49
PRKCH-216ENST00000555542 CDH19Q9H159 772 aa24.36■■□□□ 1.49
PRKCH-216ENST00000555542 LRRN3Q9H3W5 708 aa24.36■■□□□ 1.49
PRKCH-216ENST00000555542 EPB41L5Q9HCM4 733 aa24.36■■□□□ 1.49
PRKCH-216ENST00000555542 TRNAU1APQ9NX07 287 aaKnown RBP24.36■■□□□ 1.49
PRKCH-216ENST00000555542 LRIT1Q9P2V4 623 aa24.36■■□□□ 1.49
PRKCH-216ENST00000555542 LAMA5O15230 3695 aa24.36■■□□□ 1.49
PRKCH-216ENST00000555542 NTN3O00634 580 aaPredicted RBP24.35■■□□□ 1.49
PRKCH-216ENST00000555542 INPP4BO15327 924 aa24.35■■□□□ 1.49
PRKCH-216ENST00000555542 NOBOXO60393 691 aa24.35■■□□□ 1.49
PRKCH-216ENST00000555542 DXOO77932 396 aaKnown RBP24.35■■□□□ 1.49
PRKCH-216ENST00000555542 PRLP01236 227 aa24.35■■□□□ 1.49
PRKCH-216ENST00000555542 ERVPABLB-1P60509 514 aa24.35■■□□□ 1.49
PRKCH-216ENST00000555542 SKOR1P84550 965 aa24.35■■□□□ 1.49
PRKCH-216ENST00000555542 TCEAL1Q15170 157 aa24.35■■□□□ 1.49
PRKCH-216ENST00000555542 CERCAMQ5T4B2 595 aa24.35■■□□□ 1.49
PRKCH-216ENST00000555542 OGFOD3Q6PK18 319 aa24.35■■□□□ 1.49
PRKCH-216ENST00000555542 SLC30A9Q6PML9 568 aa24.35■■□□□ 1.49
PRKCH-216ENST00000555542 TRIM74Q86UV6 250 aa24.35■■□□□ 1.49
PRKCH-216ENST00000555542 SFTPA2Q8IWL1 248 aa24.35■■□□□ 1.49
PRKCH-216ENST00000555542 GPBAR1Q8TDU6 330 aa24.35■■□□□ 1.49
PRKCH-216ENST00000555542 ZDHHC1Q8WTX9 485 aa24.35■■□□□ 1.49
PRKCH-216ENST00000555542 HIC2Q96JB3 615 aa24.35■■□□□ 1.49
PRKCH-216ENST00000555542 RIOK2Q9BVS4 552 aaKnown RBP24.35■■□□□ 1.49
PRKCH-216ENST00000555542 STRADBQ9C0K7 418 aa24.35■■□□□ 1.49
PRKCH-216ENST00000555542 LUC7LQ9NQ29 371 aaKnown RBP24.35■■□□□ 1.49
PRKCH-216ENST00000555542 PKD2L2Q9NZM6 624 aa24.35■■□□□ 1.49
PRKCH-216ENST00000555542 SLC17A4Q9Y2C5 497 aa24.35■■□□□ 1.49
PRKCH-216ENST00000555542 TMEM98Q9Y2Y6 226 aa24.35■■□□□ 1.49
PRKCH-216ENST00000555542 RNF215Q9Y6U7 377 aa24.35■■□□□ 1.49
PRKCH-216ENST00000555542 CCDC187A0A096LP49 1063 aa24.34■■□□□ 1.49
PRKCH-216ENST00000555542 D6RAR5 112 aa24.34■■□□□ 1.49
PRKCH-216ENST00000555542 PSTPIP1O43586 416 aa24.34■■□□□ 1.49
PRKCH-216ENST00000555542 ASMTLO95671 621 aa24.34■■□□□ 1.49
PRKCH-216ENST00000555542 IVLP07476 585 aa24.34■■□□□ 1.49
PRKCH-216ENST00000555542 MMP2P08253 660 aa24.34■■□□□ 1.49
PRKCH-216ENST00000555542 AK4P27144 223 aaPredicted RBP24.34■■□□□ 1.49
PRKCH-216ENST00000555542 PDX1P52945 283 aa24.34■■□□□ 1.49
PRKCH-216ENST00000555542 PEX6Q13608 980 aa24.34■■□□□ 1.49
PRKCH-216ENST00000555542 TFDP2Q14188 446 aa24.34■■□□□ 1.49
PRKCH-216ENST00000555542 GALNT3Q14435 633 aa24.34■■□□□ 1.49
PRKCH-216ENST00000555542 HLTFQ14527 1009 aaKnown RBP eCLIP24.34■■□□□ 1.49
PRKCH-216ENST00000555542 QPCTQ16769 361 aa24.34■■□□□ 1.49
PRKCH-216ENST00000555542 KAZNQ674X7 775 aa24.34■■□□□ 1.49
PRKCH-216ENST00000555542 MFSD7Q6UXD7 560 aa24.34■■□□□ 1.49
PRKCH-216ENST00000555542 B4GALNT4Q76KP1 1039 aa24.34■■□□□ 1.49
PRKCH-216ENST00000555542 MARK2Q7KZI7 788 aaKnown RBP24.34■■□□□ 1.49
PRKCH-216ENST00000555542 BZW1Q7L1Q6 419 aaKnown RBP24.34■■□□□ 1.49
PRKCH-216ENST00000555542 KDELC2Q7Z4H8 507 aa24.34■■□□□ 1.49
PRKCH-216ENST00000555542 NT5DC3Q86UY8 548 aa24.34■■□□□ 1.49
PRKCH-216ENST00000555542 ARL14Q8N4G2 192 aa24.34■■□□□ 1.49
PRKCH-216ENST00000555542 CNTD1Q8N815 330 aa24.34■■□□□ 1.49
PRKCH-216ENST00000555542 EXD1Q8NHP7 514 aa24.34■■□□□ 1.49
PRKCH-216ENST00000555542 PTCD2Q8WV60 388 aaKnown RBP24.34■■□□□ 1.49
PRKCH-216ENST00000555542 FOXP3Q9BZS1 431 aa24.34■■□□□ 1.49
PRKCH-216ENST00000555542 BRD8Q9H0E9 1235 aa24.34■■□□□ 1.49
PRKCH-216ENST00000555542 SPATS2LQ9NUQ6 558 aaKnown RBP24.34■■□□□ 1.49
PRKCH-216ENST00000555542 TAAR2Q9P1P5 351 aa24.34■■□□□ 1.49
PRKCH-216ENST00000555542 APPL1Q9UKG1 709 aa24.34■■□□□ 1.49
PRKCH-216ENST00000555542 DSPP15924 2871 aaKnown RBP24.34■■□□□ 1.49
PRKCH-216ENST00000555542 A0A1W2PQM1 296 aa24.33■■□□□ 1.49
PRKCH-216ENST00000555542 ANKRD66B4E2M5 251 aa24.33■■□□□ 1.49
PRKCH-216ENST00000555542 TMX2-CTNND1H3BSU7 103 aa24.33■■□□□ 1.49
PRKCH-216ENST00000555542 SOD1P00441 154 aa24.33■■□□□ 1.49
PRKCH-216ENST00000555542 FUCA1P04066 466 aa24.33■■□□□ 1.49
PRKCH-216ENST00000555542 CYLC1P35663 651 aaPredicted RBP24.33■■□□□ 1.49
PRKCH-216ENST00000555542 ADCY8P40145 1251 aa24.33■■□□□ 1.49
PRKCH-216ENST00000555542 INHBCP55103 352 aa24.33■■□□□ 1.49
PRKCH-216ENST00000555542 LLGL1Q15334 1064 aa24.33■■□□□ 1.49
PRKCH-216ENST00000555542 PCSK7Q16549 785 aa24.33■■□□□ 1.49
PRKCH-216ENST00000555542 FAM182AQ5T1J6 154 aa24.33■■□□□ 1.49
PRKCH-216ENST00000555542 SPACA3Q8IXA5 215 aa24.33■■□□□ 1.49
PRKCH-216ENST00000555542 KCNE4Q8WWG9 221 aa24.33■■□□□ 1.49
PRKCH-216ENST00000555542 TMEM74Q96NL1 305 aa24.33■■□□□ 1.49
PRKCH-216ENST00000555542 OLFM3Q96PB7 478 aa24.33■■□□□ 1.49
PRKCH-216ENST00000555542 OR2M4Q96R27 311 aa24.33■■□□□ 1.49
PRKCH-216ENST00000555542 LYSMD1Q96S90 227 aa24.33■■□□□ 1.49
PRKCH-216ENST00000555542 AGAP2Q99490 1192 aa24.33■■□□□ 1.49
PRKCH-216ENST00000555542 ASCL3Q9NQ33 180 aa24.33■■□□□ 1.49
PRKCH-216ENST00000555542 PCDHGA8Q9Y5G5 932 aa24.33■■□□□ 1.49
PRKCH-216ENST00000555542 PCDHA13Q9Y5I0 950 aa24.33■■□□□ 1.49
PRKCH-216ENST00000555542 RHPN2P1A8MT19 583 aa24.32■■□□□ 1.48
PRKCH-216ENST00000555542 NUDT21O43809 227 aaKnown RBP24.32■■□□□ 1.48
PRKCH-216ENST00000555542 SLC4A1P02730 911 aa24.32■■□□□ 1.48
PRKCH-216ENST00000555542 PNLIPP16233 465 aa24.32■■□□□ 1.48
PRKCH-216ENST00000555542 ACTR1BP42025 376 aa24.32■■□□□ 1.48
PRKCH-216ENST00000555542 MAZP56270 477 aaKnown RBP24.32■■□□□ 1.48
PRKCH-216ENST00000555542 ACTR1AP61163 376 aa24.32■■□□□ 1.48
PRKCH-216ENST00000555542 CTBSQ01459 385 aa24.32■■□□□ 1.48
PRKCH-216ENST00000555542 BROXQ5VW32 411 aa24.32■■□□□ 1.48
PRKCH-216ENST00000555542 SPRED1Q7Z699 444 aa24.32■■□□□ 1.48
PRKCH-216ENST00000555542 B3GNT8Q7Z7M8 397 aa24.32■■□□□ 1.48
PRKCH-216ENST00000555542 NLRP8Q86W28 1048 aa24.32■■□□□ 1.48
PRKCH-216ENST00000555542 NRROSQ86YC3 692 aa24.32■■□□□ 1.48
PRKCH-216ENST00000555542 GALNT13Q8IUC8 556 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms