RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 ITGA9Q13797 1035 aa2.82□□□□□ -1.96
SRP54-207ENST00000555535 GTF2H2Q13888 395 aa2.82□□□□□ -1.96
SRP54-207ENST00000555535 CCDC96Q2M329 555 aa2.82□□□□□ -1.96
SRP54-207ENST00000555535 SERTAD4-AS1Q5TG53 156 aa2.82□□□□□ -1.96
SRP54-207ENST00000555535 GTF2H2CQ6P1K8 395 aa2.82□□□□□ -1.96
SRP54-207ENST00000555535 HERC6Q8IVU3 1022 aa2.82□□□□□ -1.96
SRP54-207ENST00000555535 SUGP1Q8IWZ8 645 aaKnown RBP2.82□□□□□ -1.96
SRP54-207ENST00000555535 CTAGE4Q8IX94 777 aa2.82□□□□□ -1.96
SRP54-207ENST00000555535 FBXL16Q8N461 479 aa2.82□□□□□ -1.96
SRP54-207ENST00000555535 TRIM58Q8NG06 486 aa2.82□□□□□ -1.96
SRP54-207ENST00000555535 FBXL8Q96CD0 374 aa2.82□□□□□ -1.96
SRP54-207ENST00000555535 SIN3AQ96ST3 1273 aa2.82□□□□□ -1.96
SRP54-207ENST00000555535 CMKLR1Q99788 373 aa2.82□□□□□ -1.96
SRP54-207ENST00000555535 SYT17Q9BSW7 474 aa2.82□□□□□ -1.96
SRP54-207ENST00000555535 POLR3CQ9BUI4 534 aaPredicted RBP2.82□□□□□ -1.96
SRP54-207ENST00000555535 ZNF700Q9H0M5 742 aa2.82□□□□□ -1.96
SRP54-207ENST00000555535 BABAM1Q9NWV8 329 aa2.82□□□□□ -1.96
SRP54-207ENST00000555535 ZNF624Q9P2J8 865 aaPredicted RBP2.82□□□□□ -1.96
SRP54-207ENST00000555535 PEMTQ9UBM1 199 aa2.82□□□□□ -1.96
SRP54-207ENST00000555535 DAAM1Q9Y4D1 1078 aa2.82□□□□□ -1.96
SRP54-207ENST00000555535 LSM4Q9Y4Z0 139 aaKnown RBP2.82□□□□□ -1.96
SRP54-207ENST00000555535 SH2B2O14492 632 aaPredicted RBP2.81□□□□□ -1.96
SRP54-207ENST00000555535 BCAT2O15382 392 aaPredicted RBP2.81□□□□□ -1.96
SRP54-207ENST00000555535 CNPP09543 421 aaKnown RBP2.81□□□□□ -1.96
SRP54-207ENST00000555535 MAOAP21397 527 aa2.81□□□□□ -1.96
SRP54-207ENST00000555535 SHMT1P34896 483 aa2.81□□□□□ -1.96
SRP54-207ENST00000555535 EFNA5P52803 228 aa2.81□□□□□ -1.96
SRP54-207ENST00000555535 PDE1BQ01064 536 aa2.81□□□□□ -1.96
SRP54-207ENST00000555535 ZFP69Q49AA0 526 aa2.81□□□□□ -1.96
SRP54-207ENST00000555535 SIRPB2Q5JXA9 342 aa2.81□□□□□ -1.96
SRP54-207ENST00000555535 GPAT4Q86UL3 456 aa2.81□□□□□ -1.96
SRP54-207ENST00000555535 MYLK4Q86YV6 388 aaPredicted RBP2.81□□□□□ -1.96
SRP54-207ENST00000555535 APLFQ8IW19 511 aaPredicted RBP2.81□□□□□ -1.96
SRP54-207ENST00000555535 DHX40Q8IX18 779 aaKnown RBP2.81□□□□□ -1.96
SRP54-207ENST00000555535 FTSJ3Q8IY81 847 aaKnown RBP2.81□□□□□ -1.96
SRP54-207ENST00000555535 PLD5Q8N7P1 536 aa2.81□□□□□ -1.96
SRP54-207ENST00000555535 VPS37AQ8NEZ2 397 aa2.81□□□□□ -1.96
SRP54-207ENST00000555535 BEST2Q8NFU1 509 aa2.81□□□□□ -1.96
SRP54-207ENST00000555535 STAMQ92783 540 aa2.81□□□□□ -1.96
SRP54-207ENST00000555535 ST6GAL2Q96JF0 529 aa2.81□□□□□ -1.96
SRP54-207ENST00000555535 CD180Q99467 661 aa2.81□□□□□ -1.96
SRP54-207ENST00000555535 EYA3Q99504 573 aa2.81□□□□□ -1.96
SRP54-207ENST00000555535 FAM167BQ9BTA0 163 aa2.81□□□□□ -1.96
SRP54-207ENST00000555535 PHF7Q9BWX1 381 aaPredicted RBP2.81□□□□□ -1.96
SRP54-207ENST00000555535 MAGEE1Q9HCI5 957 aa2.81□□□□□ -1.96
SRP54-207ENST00000555535 RASSF1Q9NS23 344 aa2.81□□□□□ -1.96
SRP54-207ENST00000555535 KIAA1456Q9P272 454 aa2.81□□□□□ -1.96
SRP54-207ENST00000555535 FBXO9Q9UK97 447 aaPredicted RBP2.81□□□□□ -1.96
SRP54-207ENST00000555535 DLGAP4Q9Y2H0 992 aa2.81□□□□□ -1.96
SRP54-207ENST00000555535 IGKV6D-21A0A0A0MT36 114 aa2.8□□□□□ -1.96
SRP54-207ENST00000555535 GOLGA6L9A6NEM1 432 aa2.8□□□□□ -1.96
SRP54-207ENST00000555535 TMEM202A6NGA9 273 aa2.8□□□□□ -1.96
SRP54-207ENST00000555535 WDR1O75083 606 aa2.8□□□□□ -1.96
SRP54-207ENST00000555535 HEXAP06865 529 aa2.8□□□□□ -1.96
SRP54-207ENST00000555535 BDKRB2P30411 391 aa2.8□□□□□ -1.96
SRP54-207ENST00000555535 KRT24Q2M2I5 525 aa2.8□□□□□ -1.96
SRP54-207ENST00000555535 SLC45A4Q5BKX6 768 aa2.8□□□□□ -1.96
SRP54-207ENST00000555535 ZNF774Q6NX45 483 aa2.8□□□□□ -1.96
SRP54-207ENST00000555535 ATF7IPQ6VMQ6 1270 aa2.8□□□□□ -1.96
SRP54-207ENST00000555535 C15orf39Q6ZRI6 1047 aa2.8□□□□□ -1.96
SRP54-207ENST00000555535 LINGO2Q7L985 606 aa2.8□□□□□ -1.96
SRP54-207ENST00000555535 CDC20BQ86Y33 519 aa2.8□□□□□ -1.96
SRP54-207ENST00000555535 SPATA6LQ8N4H0 392 aa2.8□□□□□ -1.96
SRP54-207ENST00000555535 LSM14AQ8ND56 463 aaKnown RBP2.8□□□□□ -1.96
SRP54-207ENST00000555535 SPPL3Q8TCT6 385 aa2.8□□□□□ -1.96
SRP54-207ENST00000555535 ZNF473Q8WTR7 871 aaKnown RBP2.8□□□□□ -1.96
SRP54-207ENST00000555535 RUFY2Q8WXA3 655 aa2.8□□□□□ -1.96
SRP54-207ENST00000555535 TM9SF4Q92544 642 aa2.8□□□□□ -1.96
SRP54-207ENST00000555535 LTV1Q96GA3 475 aaPredicted RBP2.8□□□□□ -1.96
SRP54-207ENST00000555535 SLC39A13Q96H72 371 aa2.8□□□□□ -1.96
SRP54-207ENST00000555535 MTERF1Q99551 399 aaKnown RBP2.8□□□□□ -1.96
SRP54-207ENST00000555535 CABLES2Q9BTV7 478 aa2.8□□□□□ -1.96
SRP54-207ENST00000555535 TAOK3Q9H2K8 898 aa2.8□□□□□ -1.96
SRP54-207ENST00000555535 C2orf42Q9NWW7 574 aa2.8□□□□□ -1.96
SRP54-207ENST00000555535 ALKBH4Q9NXW9 302 aa2.8□□□□□ -1.96
SRP54-207ENST00000555535 SUFUQ9UMX1 484 aa2.8□□□□□ -1.96
SRP54-207ENST00000555535 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.8□□□□□ -1.96
SRP54-207ENST00000555535 RIPOR2Q9Y4F9 1068 aa2.8□□□□□ -1.96
SRP54-207ENST00000555535 E9PQ18 207 aa2.79□□□□□ -1.96
SRP54-207ENST00000555535 ZNF26P17031 533 aaPredicted RBP2.79□□□□□ -1.96
SRP54-207ENST00000555535 CHKAP35790 457 aa2.79□□□□□ -1.96
SRP54-207ENST00000555535 METAP2P50579 478 aaKnown RBP eCLIP2.79□□□□□ -1.96
SRP54-207ENST00000555535 RPL24P83731 157 aaKnown RBP2.79□□□□□ -1.96
SRP54-207ENST00000555535 GAGE5Q13069 117 aa2.79□□□□□ -1.96
SRP54-207ENST00000555535 GAGE6Q13070 117 aa2.79□□□□□ -1.96
SRP54-207ENST00000555535 PRKG1Q13976 671 aa2.79□□□□□ -1.96
SRP54-207ENST00000555535 ZNF234Q14588 700 aa2.79□□□□□ -1.96
SRP54-207ENST00000555535 TAF5Q15542 800 aa2.79□□□□□ -1.96
SRP54-207ENST00000555535 TAF11Q15544 211 aa2.79□□□□□ -1.96
SRP54-207ENST00000555535 FAM53AQ6NSI3 398 aaPredicted RBP2.79□□□□□ -1.96
SRP54-207ENST00000555535 FAM171BQ6P995 826 aa2.79□□□□□ -1.96
SRP54-207ENST00000555535 KCTD18Q6PI47 426 aaPredicted RBP2.79□□□□□ -1.96
SRP54-207ENST00000555535 RAD9BQ6WBX8 426 aa2.79□□□□□ -1.96
SRP54-207ENST00000555535 TMTC1Q8IUR5 882 aa2.79□□□□□ -1.96
SRP54-207ENST00000555535 ZCCHC9Q8N567 271 aaKnown RBP2.79□□□□□ -1.96
SRP54-207ENST00000555535 ZBTB2Q8N680 514 aa2.79□□□□□ -1.96
SRP54-207ENST00000555535 HMGCLL1Q8TB92 370 aa2.79□□□□□ -1.96
SRP54-207ENST00000555535 TRAPPC12Q8WVT3 735 aa2.79□□□□□ -1.96
SRP54-207ENST00000555535 RHBDF1Q96CC6 855 aa2.79□□□□□ -1.96
SRP54-207ENST00000555535 MOCOSQ96EN8 888 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms