RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 SUDS3Q9H7L9 328 aaPredicted RBP13.63□□□□□ -0.23
SNX6-203ENST00000555416 USP29Q9HBJ7 922 aa13.63□□□□□ -0.23
SNX6-203ENST00000555416 CYP4F12Q9HCS2 524 aa13.63□□□□□ -0.23
SNX6-203ENST00000555416 KLHL8Q9P2G9 620 aaPredicted RBP13.63□□□□□ -0.23
SNX6-203ENST00000555416 CNOT6Q9ULM6 557 aaKnown RBP13.63□□□□□ -0.23
SNX6-203ENST00000555416 TMEM98Q9Y2Y6 226 aa13.63□□□□□ -0.23
SNX6-203ENST00000555416 PCYT1BQ9Y5K3 369 aaPredicted RBP13.63□□□□□ -0.23
SNX6-203ENST00000555416 ST14Q9Y5Y6 855 aa13.63□□□□□ -0.23
SNX6-203ENST00000555416 DGKBQ9Y6T7 804 aa13.63□□□□□ -0.23
SNX6-203ENST00000555416 WDFY3Q8IZQ1 3526 aa13.63□□□□□ -0.23
SNX6-203ENST00000555416 USP24Q9UPU5 2620 aa13.62□□□□□ -0.23
SNX6-203ENST00000555416 LOC285095A0A1B0GVY8 99 aa13.62□□□□□ -0.23
SNX6-203ENST00000555416 PRSS38A1L453 326 aa13.62□□□□□ -0.23
SNX6-203ENST00000555416 FADS2P1A8MWK0 482 aa13.62□□□□□ -0.23
SNX6-203ENST00000555416 TPP1O14773 563 aa13.62□□□□□ -0.23
SNX6-203ENST00000555416 INPP4BO15327 924 aa13.62□□□□□ -0.23
SNX6-203ENST00000555416 MTSS1O43312 755 aa13.62□□□□□ -0.23
SNX6-203ENST00000555416 NDST3O95803 873 aa13.62□□□□□ -0.23
SNX6-203ENST00000555416 ANXA6P08133 673 aa13.62□□□□□ -0.23
SNX6-203ENST00000555416 ALPPL2P10696 532 aa13.62□□□□□ -0.23
SNX6-203ENST00000555416 RBP3P10745 1247 aa13.62□□□□□ -0.23
SNX6-203ENST00000555416 NFKBIAP25963 317 aa13.62□□□□□ -0.23
SNX6-203ENST00000555416 GPR1P46091 355 aa13.62□□□□□ -0.23
SNX6-203ENST00000555416 SPINT3P49223 89 aa13.62□□□□□ -0.23
SNX6-203ENST00000555416 INSM1Q01101 510 aaPredicted RBP13.62□□□□□ -0.23
SNX6-203ENST00000555416 KLF1Q13351 362 aaPredicted RBP13.62□□□□□ -0.23
SNX6-203ENST00000555416 OLIG2Q13516 323 aa13.62□□□□□ -0.23
SNX6-203ENST00000555416 CAMK2BQ13554 666 aa13.62□□□□□ -0.23
SNX6-203ENST00000555416 C6orf132Q5T0Z8 1188 aa13.62□□□□□ -0.23
SNX6-203ENST00000555416 ZCCHC8Q6NZY4 707 aaKnown RBP13.62□□□□□ -0.23
SNX6-203ENST00000555416 ADAMTSL4Q6UY14 1074 aa13.62□□□□□ -0.23
SNX6-203ENST00000555416 NRROSQ86YC3 692 aa13.62□□□□□ -0.23
SNX6-203ENST00000555416 SYCE1Q8N0S2 351 aa13.62□□□□□ -0.23
SNX6-203ENST00000555416 RNF10Q8N5U6 811 aaKnown RBP13.62□□□□□ -0.23
SNX6-203ENST00000555416 FCRL5Q96RD9 977 aa13.62□□□□□ -0.23
SNX6-203ENST00000555416 DUSP23Q9BVJ7 150 aa13.62□□□□□ -0.23
SNX6-203ENST00000555416 BOCQ9BWV1 1114 aa13.62□□□□□ -0.23
SNX6-203ENST00000555416 GRPEL1Q9HAV7 217 aa13.62□□□□□ -0.23
SNX6-203ENST00000555416 PHPT1Q9NRX4 125 aaPredicted RBP13.62□□□□□ -0.23
SNX6-203ENST00000555416 FAM153AQ9UHL3 310 aa13.62□□□□□ -0.23
SNX6-203ENST00000555416 MOSPD1Q9UJG1 213 aa13.62□□□□□ -0.23
SNX6-203ENST00000555416 PLEKHM1Q9Y4G2 1056 aa13.62□□□□□ -0.23
SNX6-203ENST00000555416 CPED1A4D0V7 1026 aa13.61□□□□□ -0.23
SNX6-203ENST00000555416 MIF4GDA9UHW6 222 aaKnown RBP13.61□□□□□ -0.23
SNX6-203ENST00000555416 TNFRSF10CO14798 259 aa13.61□□□□□ -0.23
SNX6-203ENST00000555416 TJP3O95049 919 aa13.61□□□□□ -0.23
SNX6-203ENST00000555416 AGTP01019 485 aa13.61□□□□□ -0.23
SNX6-203ENST00000555416 TNFP01375 233 aa13.61□□□□□ -0.23
SNX6-203ENST00000555416 SLC4A1P02730 911 aa13.61□□□□□ -0.23
SNX6-203ENST00000555416 CAPNS1P04632 268 aa13.61□□□□□ -0.23
SNX6-203ENST00000555416 CTSEP14091 401 aa13.61□□□□□ -0.23
SNX6-203ENST00000555416 TEAD1P28347 426 aa13.61□□□□□ -0.23
SNX6-203ENST00000555416 BLKP51451 505 aa13.61□□□□□ -0.23
SNX6-203ENST00000555416 SIRPB2Q5JXA9 342 aa13.61□□□□□ -0.23
SNX6-203ENST00000555416 PERM1Q5SV97 790 aa13.61□□□□□ -0.23
SNX6-203ENST00000555416 HENMT1Q5T8I9 393 aaKnown RBP13.61□□□□□ -0.23
SNX6-203ENST00000555416 HES3Q5TGS1 186 aa13.61□□□□□ -0.23
SNX6-203ENST00000555416 DARS2Q6PI48 645 aaKnown RBP13.61□□□□□ -0.23
SNX6-203ENST00000555416 DOK6Q6PKX4 331 aa13.61□□□□□ -0.23
SNX6-203ENST00000555416 ZNF765Q7L2R6 523 aa13.61□□□□□ -0.23
SNX6-203ENST00000555416 TMC3Q7Z5M5 1100 aa13.61□□□□□ -0.23
SNX6-203ENST00000555416 NRSN1Q8IZ57 195 aa13.61□□□□□ -0.23
SNX6-203ENST00000555416 TXLNBQ8N3L3 684 aa13.61□□□□□ -0.23
SNX6-203ENST00000555416 SLC25A41Q8N5S1 370 aa13.61□□□□□ -0.23
SNX6-203ENST00000555416 UBL4BQ8N7F7 174 aa13.61□□□□□ -0.23
SNX6-203ENST00000555416 KYQ8NBH2 561 aa13.61□□□□□ -0.23
SNX6-203ENST00000555416 GPR26Q8NDV2 337 aa13.61□□□□□ -0.23
SNX6-203ENST00000555416 CCDC112Q8NEF3 446 aa13.61□□□□□ -0.23
SNX6-203ENST00000555416 CCDC110Q8TBZ0 833 aa13.61□□□□□ -0.23
SNX6-203ENST00000555416 VAT1Q99536 393 aa13.61□□□□□ -0.23
SNX6-203ENST00000555416 GBA3Q9H227 469 aa13.61□□□□□ -0.23
SNX6-203ENST00000555416 MAGEE1Q9HCI5 957 aa13.61□□□□□ -0.23
SNX6-203ENST00000555416 LZTFL1Q9NQ48 299 aa13.61□□□□□ -0.23
SNX6-203ENST00000555416 SIRPGQ9P1W8 387 aa13.61□□□□□ -0.23
SNX6-203ENST00000555416 RSPH14Q9UHP6 348 aa13.61□□□□□ -0.23
SNX6-203ENST00000555416 SUFUQ9UMX1 484 aa13.61□□□□□ -0.23
SNX6-203ENST00000555416 SLC17A4Q9Y2C5 497 aa13.61□□□□□ -0.23
SNX6-203ENST00000555416 ZNF711Q9Y462 761 aa13.61□□□□□ -0.23
SNX6-203ENST00000555416 OAS3Q9Y6K5 1087 aaKnown RBP13.61□□□□□ -0.23
SNX6-203ENST00000555416 RP1P56715 2156 aa13.61□□□□□ -0.23
SNX6-203ENST00000555416 KNTC1P50748 2209 aa13.6□□□□□ -0.23
SNX6-203ENST00000555416 DMXL2Q8TDJ6 3036 aa13.6□□□□□ -0.23
SNX6-203ENST00000555416 KCNN4O15554 427 aa13.6□□□□□ -0.23
SNX6-203ENST00000555416 ATP1A1P05023 1023 aaKnown RBP13.6□□□□□ -0.23
SNX6-203ENST00000555416 PSMB4P28070 264 aa13.6□□□□□ -0.23
SNX6-203ENST00000555416 ILKQ13418 452 aa13.6□□□□□ -0.23
SNX6-203ENST00000555416 ELOCQ15369 112 aa13.6□□□□□ -0.23
SNX6-203ENST00000555416 HS1BP3Q53T59 392 aa13.6□□□□□ -0.23
SNX6-203ENST00000555416 ANKRD20A2Q5SQ80 823 aa13.6□□□□□ -0.23
SNX6-203ENST00000555416 ZNF648Q5T619 568 aaPredicted RBP13.6□□□□□ -0.23
SNX6-203ENST00000555416 ANKRD20A1Q5TYW2 823 aa13.6□□□□□ -0.23
SNX6-203ENST00000555416 ANKRD20A3Q5VUR7 823 aa13.6□□□□□ -0.23
SNX6-203ENST00000555416 ALS2CLQ60I27 953 aa13.6□□□□□ -0.23
SNX6-203ENST00000555416 EFL1Q7Z2Z2 1120 aaKnown RBP13.6□□□□□ -0.23
SNX6-203ENST00000555416 NLRP8Q86W28 1048 aa13.6□□□□□ -0.23
SNX6-203ENST00000555416 CDKL3Q8IVW4 592 aaPredicted RBP13.6□□□□□ -0.23
SNX6-203ENST00000555416 FSTL5Q8N475 847 aaPredicted RBP13.6□□□□□ -0.23
SNX6-203ENST00000555416 TTC30BQ8N4P2 665 aa13.6□□□□□ -0.23
SNX6-203ENST00000555416 IPMKQ8NFU5 416 aa13.6□□□□□ -0.23
SNX6-203ENST00000555416 ATL2Q8NHH9 583 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms