RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 CRTC1Q6UUV9 634 aa10.9□□□□□ -0.66
SHMT2-218ENST00000555213 RANBP10Q6VN20 620 aa10.9□□□□□ -0.66
SHMT2-218ENST00000555213 LIPIQ6XZB0 460 aa10.9□□□□□ -0.66
SHMT2-218ENST00000555213 RAVER1Q8IY67 606 aaKnown RBP10.9□□□□□ -0.66
SHMT2-218ENST00000555213 MPP5Q8N3R9 675 aa10.9□□□□□ -0.66
SHMT2-218ENST00000555213 KLK6Q92876 244 aa10.9□□□□□ -0.66
SHMT2-218ENST00000555213 NUS1Q96E22 293 aa10.9□□□□□ -0.66
SHMT2-218ENST00000555213 SLC6A18Q96N87 628 aa10.9□□□□□ -0.66
SHMT2-218ENST00000555213 MYOCQ99972 504 aa10.9□□□□□ -0.66
SHMT2-218ENST00000555213 NUSAP1Q9BXS6 441 aaKnown RBP10.9□□□□□ -0.66
SHMT2-218ENST00000555213 GPR63Q9BZJ6 419 aa10.9□□□□□ -0.66
SHMT2-218ENST00000555213 ZFYVE1Q9HBF4 777 aa10.9□□□□□ -0.66
SHMT2-218ENST00000555213 MAGEE1Q9HCI5 957 aa10.9□□□□□ -0.66
SHMT2-218ENST00000555213 TM9SF3Q9HD45 589 aa10.9□□□□□ -0.66
SHMT2-218ENST00000555213 RAD18Q9NS91 495 aa10.9□□□□□ -0.66
SHMT2-218ENST00000555213 PKD2L2Q9NZM6 624 aa10.9□□□□□ -0.66
SHMT2-218ENST00000555213 PLAAQ9Y263 795 aa10.9□□□□□ -0.66
SHMT2-218ENST00000555213 ZNF711Q9Y462 761 aa10.9□□□□□ -0.66
SHMT2-218ENST00000555213 SPAG17Q6Q759 2223 aa10.9□□□□□ -0.66
SHMT2-218ENST00000555213 GPR179Q6PRD1 2367 aa10.89□□□□□ -0.67
SHMT2-218ENST00000555213 A6NNZ2 444 aa10.89□□□□□ -0.67
SHMT2-218ENST00000555213 H3BQF6 201 aa10.89□□□□□ -0.67
SHMT2-218ENST00000555213 AP3B1O00203 1094 aa10.89□□□□□ -0.67
SHMT2-218ENST00000555213 USP12O75317 370 aa10.89□□□□□ -0.67
SHMT2-218ENST00000555213 RECQL5O94762 991 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-218ENST00000555213 PAK4O96013 591 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-218ENST00000555213 AGTP01019 485 aa10.89□□□□□ -0.67
SHMT2-218ENST00000555213 PYGLP06737 847 aa10.89□□□□□ -0.67
SHMT2-218ENST00000555213 GCAP28676 217 aa10.89□□□□□ -0.67
SHMT2-218ENST00000555213 CD38P28907 300 aa10.89□□□□□ -0.67
SHMT2-218ENST00000555213 ELK3P41970 407 aa10.89□□□□□ -0.67
SHMT2-218ENST00000555213 CHRNA4P43681 627 aa10.89□□□□□ -0.67
SHMT2-218ENST00000555213 STC1P52823 247 aa10.89□□□□□ -0.67
SHMT2-218ENST00000555213 SARNPP82979 210 aaKnown RBP10.89□□□□□ -0.67
SHMT2-218ENST00000555213 PDE1BQ01064 536 aa10.89□□□□□ -0.67
SHMT2-218ENST00000555213 ZNF844Q08AG5 666 aa10.89□□□□□ -0.67
SHMT2-218ENST00000555213 NUMA1Q14980 2115 aa10.89□□□□□ -0.67
SHMT2-218ENST00000555213 AGERQ15109 404 aa10.89□□□□□ -0.67
SHMT2-218ENST00000555213 BBS9Q3SYG4 887 aa10.89□□□□□ -0.67
SHMT2-218ENST00000555213 LRIG3Q6UXM1 1119 aa10.89□□□□□ -0.67
SHMT2-218ENST00000555213 KYAT3Q6YP21 454 aaKnown RBP10.89□□□□□ -0.67
SHMT2-218ENST00000555213 CENPUQ71F23 418 aa10.89□□□□□ -0.67
SHMT2-218ENST00000555213 LYSMD3Q7Z3D4 306 aa10.89□□□□□ -0.67
SHMT2-218ENST00000555213 GLT6D1Q7Z4J2 308 aa10.89□□□□□ -0.67
SHMT2-218ENST00000555213 TSPAN33Q86UF1 283 aa10.89□□□□□ -0.67
SHMT2-218ENST00000555213 IQCHQ86VS3 1027 aa10.89□□□□□ -0.67
SHMT2-218ENST00000555213 ANKMY2Q8IV38 441 aa10.89□□□□□ -0.67
SHMT2-218ENST00000555213 PDIK1LQ8N165 341 aa10.89□□□□□ -0.67
SHMT2-218ENST00000555213 DNAAF3Q8N9W5 541 aa10.89□□□□□ -0.67
SHMT2-218ENST00000555213 TMEM145Q8NBT3 493 aa10.89□□□□□ -0.67
SHMT2-218ENST00000555213 OR52K1Q8NGK4 314 aa10.89□□□□□ -0.67
SHMT2-218ENST00000555213 UHMK1Q8TAS1 419 aaKnown RBP10.89□□□□□ -0.67
SHMT2-218ENST00000555213 BLOC1S5Q8TDH9 187 aa10.89□□□□□ -0.67
SHMT2-218ENST00000555213 UBLCP1Q8WVY7 318 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-218ENST00000555213 LENG8Q96PV6 779 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-218ENST00000555213 PHOX2BQ99453 314 aa10.89□□□□□ -0.67
SHMT2-218ENST00000555213 APOL2Q9BQE5 337 aa10.89□□□□□ -0.67
SHMT2-218ENST00000555213 TRIM56Q9BRZ2 755 aaKnown RBP10.89□□□□□ -0.67
SHMT2-218ENST00000555213 TMEM109Q9BVC6 243 aa10.89□□□□□ -0.67
SHMT2-218ENST00000555213 FRMD8Q9BZ67 464 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-218ENST00000555213 CDH19Q9H159 772 aa10.89□□□□□ -0.67
SHMT2-218ENST00000555213 FZD3Q9NPG1 666 aa10.89□□□□□ -0.67
SHMT2-218ENST00000555213 PIH1D1Q9NWS0 290 aaKnown RBP10.89□□□□□ -0.67
SHMT2-218ENST00000555213 ANKRD36A6QL64 1941 aa10.89□□□□□ -0.67
SHMT2-218ENST00000555213 WDFY4Q6ZS81 3184 aa10.89□□□□□ -0.67
SHMT2-218ENST00000555213 THADAQ6YHU6 1953 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 RGSL1A5PLK6 1076 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 C2orf81A6NN90 581 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 TOR1BO14657 336 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 VILLO15195 856 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 GFRA3O60609 400 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 CRTAMO95727 393 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 PCCBP05166 539 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 SYPP08247 313 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 PIRTP0C851 137 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 SSTR1P30872 391 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 ETV3P41162 512 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 RABIFP47224 123 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 ATXN3P54252 364 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-218ENST00000555213 SPEM2Q0P670 501 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 CDH17Q12864 832 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 LAMB3Q13751 1172 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 FGL2Q14314 439 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 IRF4Q15306 451 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 CSRP2Q16527 193 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 PLA2G2CQ5R387 149 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 ZDHHC20Q5W0Z9 365 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 SLC23A3Q6PIS1 610 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 IL27RAQ6UWB1 636 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 ZNF765Q7L2R6 523 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 HSD11B1LQ7Z5J1 315 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 PTAR1Q7Z6K3 402 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-218ENST00000555213 ZBED8Q8IZ13 594 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 NRSN1Q8IZ57 195 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 MFSD2AQ8NA29 543 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 FBXO36Q8NEA4 188 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 ARL8AQ96BM9 186 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 DTD2Q96FN9 168 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 COQ10AQ96MF6 247 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 EBNA1BP2Q99848 306 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms