RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 DSG4Q86SJ6 1040 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 DEFB119Q8N690 84 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 GPR26Q8NDV2 337 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 OR6P1Q8NGX9 317 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 SLC44A1Q8WWI5 657 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 SCAMP4Q969E2 229 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 FAM131CQ96AQ9 280 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 OMDQ99983 421 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 DHRS4Q9BTZ2 278 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 ABCG8Q9H221 673 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 ZFYVE1Q9HBF4 777 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 TMBIM4Q9HC24 238 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 NLE1Q9NVX2 485 aaPredicted RBP10.74□□□□□ -0.69
TDP1-211ENST00000555178 IL17CQ9P0M4 197 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 ZFATQ9P243 1243 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 C2orf81A6NN90 581 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 K7ESM1 405 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 GPR37L1O60883 481 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 RNASEH1O60930 286 aaKnown RBP10.74□□□□□ -0.69
TDP1-211ENST00000555178 PAPSS2O95340 614 aaPredicted RBP10.74□□□□□ -0.69
TDP1-211ENST00000555178 ADH1BP00325 375 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 GSTA2P09210 222 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 MYZAPP0CAP1 466 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 C7P10643 843 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 BPIP17213 487 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 LPOP22079 712 aaPredicted RBP10.74□□□□□ -0.69
TDP1-211ENST00000555178 MAT2AP31153 395 aaKnown RBP10.74□□□□□ -0.69
TDP1-211ENST00000555178 VIPR1P32241 457 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 HMGCLP35914 325 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 SLC1A2P43004 574 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 DGKEP52429 567 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 PGGT1BP53609 377 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 ADPRHP54922 357 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 PRAMEP78395 509 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 ACVR1Q04771 509 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 PEX6Q13608 980 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 HSF5Q4G112 596 aaPredicted RBP10.74□□□□□ -0.69
TDP1-211ENST00000555178 ZNF789Q5FWF6 425 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 ZNF470Q6ECI4 717 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 DPPA4Q7L190 304 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 LRRC6Q86X45 466 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 TSTD1Q8NFU3 115 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 OR14C36Q8NHC7 312 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 STYXQ8WUJ0 223 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 CDKN2AIPNLQ96HQ2 116 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 LYSMD1Q96S90 227 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 COL25A1Q9BXS0 654 aaPredicted RBP10.74□□□□□ -0.69
TDP1-211ENST00000555178 EBF2Q9HAK2 575 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 ITM2CQ9NQX7 267 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 SPAG17Q6Q759 2223 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 ZNF318Q5VUA4 2279 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 HMX2A2RU54 273 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 IGLON5A6NGN9 336 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 STX7O15400 261 aaKnown RBP10.73□□□□□ -0.69
TDP1-211ENST00000555178 TCEA3O75764 348 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 RPP40O75818 363 aaKnown RBP10.73□□□□□ -0.69
TDP1-211ENST00000555178 CREB1P16220 341 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 GABRB3P28472 473 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 MSH2P43246 934 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 STC1P52823 247 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 XIAPP98170 497 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 SRSF5Q13243 272 aaKnown RBP10.73□□□□□ -0.69
TDP1-211ENST00000555178 FAM46CQ5VWP2 391 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 PDPK2PQ6A1A2 396 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 FAM151BQ6UXP7 276 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 MARK2Q7KZI7 788 aaKnown RBP10.73□□□□□ -0.69
TDP1-211ENST00000555178 ACVR1CQ8NER5 493 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 PBXIP1Q96AQ6 731 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 TMEM109Q9BVC6 243 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 DYRK4Q9NR20 520 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 USP36Q9P275 1121 aaKnown RBP10.73□□□□□ -0.69
TDP1-211ENST00000555178 MBD1Q9UIS9 605 aaPredicted RBP10.73□□□□□ -0.69
TDP1-211ENST00000555178 TMPRSS11EQ9UL52 423 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 TDGF1P13385 188 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 C6P13671 934 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 UGT1A6P19224 532 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 UGT1A1P22309 533 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 UGT1A4P22310 534 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 XPAP23025 273 aaPredicted RBP10.73□□□□□ -0.69
TDP1-211ENST00000555178 MC4RP32245 332 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 UGT1A3P35503 534 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 UGT1A5P35504 534 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 GMPRP36959 345 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 CXCL12P48061 93 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 POLR2LP62875 67 aaKnown RBP10.73□□□□□ -0.69
TDP1-211ENST00000555178 PSAPL1Q6NUJ1 521 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 NEPROQ6NW34 567 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 PACS1Q6VY07 963 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 TECPR1Q7Z6L1 1165 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 STRA8Q7Z7C7 330 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 PIANPQ8IYJ0 282 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 OTUD6BQ8N6M0 293 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 PLA2G15Q8NCC3 412 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 HCAR2Q8TDS4 363 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 MYOCQ99972 504 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 CCDC77Q9BR77 488 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 C6orf106Q9H6K1 298 aaPredicted RBP10.73□□□□□ -0.69
TDP1-211ENST00000555178 POLMQ9NP87 494 aaPredicted RBP10.73□□□□□ -0.69
TDP1-211ENST00000555178 FZD3Q9NPG1 666 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 IL26Q9NPH9 171 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms