RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 C9orf131Q5VYM1 1079 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 PAOXQ6QHF9 649 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 CCDC81Q6ZN84 652 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 CHSY3Q70JA7 882 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 ERMP1Q7Z2K6 904 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 SPPL2CQ8IUH8 684 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 LPCAT1Q8NF37 534 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 OR4K2Q8NGD2 314 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 ZFP28Q8NHY6 868 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 FIG4Q92562 907 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 CDKN2AIPNLQ96HQ2 116 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 CDK5RAP1Q96SZ6 601 aaKnown RBP3.89□□□□□ -1.79
KTN1-217ENST00000554831 SORT1Q99523 831 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 IL12RB2Q99665 862 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 WDR83Q9BRX9 315 aaKnown RBP3.89□□□□□ -1.79
KTN1-217ENST00000554831 NUSAP1Q9BXS6 441 aaKnown RBP3.89□□□□□ -1.79
KTN1-217ENST00000554831 FAM126AQ9BYI3 521 aaPredicted RBP3.89□□□□□ -1.79
KTN1-217ENST00000554831 ZNF556Q9HAH1 456 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 PREBQ9HCU5 417 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 VPS28Q9UK41 221 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 PADI4Q9UM07 663 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 INVSQ9Y283 1065 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 TIMM22Q9Y584 194 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 COL22A1Q8NFW1 1626 aaPredicted RBP3.89□□□□□ -1.79
KTN1-217ENST00000554831 AHCTF1Q8WYP5 2266 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 DNAJC25-GNG10A0A024R161 153 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 A0A1W2PP18 115 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 H3BSA7 217 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 EI24O14681 340 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 SEC22BO75396 215 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 NDST2P52849 883 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 EEFSECP57772 596 aaKnown RBP3.89□□□□□ -1.79
KTN1-217ENST00000554831 MRPS6P82932 125 aaKnown RBP3.89□□□□□ -1.79
KTN1-217ENST00000554831 SULT2A1Q06520 285 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 OLIG2Q13516 323 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 KRR1Q13601 381 aaKnown RBP3.89□□□□□ -1.79
KTN1-217ENST00000554831 PARP15Q460N3 678 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 SLC39A12Q504Y0 691 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 PIGGQ5H8A4 983 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 MSANTD2Q6P1R3 559 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 ZNF534Q76KX8 674 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 LDB1Q86U70 411 aaPredicted RBP3.89□□□□□ -1.79
KTN1-217ENST00000554831 CENPLQ8N0S6 344 aaPredicted RBP3.89□□□□□ -1.79
KTN1-217ENST00000554831 LGI2Q8N0V4 545 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 SVOPQ8N4V2 548 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 FBXO30Q8TB52 745 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 FCRL3Q96P31 734 aaPredicted RBP3.89□□□□□ -1.79
KTN1-217ENST00000554831 APOL4Q9BPW4 351 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 LPIN3Q9BQK8 851 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 ZNF696Q9H7X3 374 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 FBRSL1Q9HCM7 1045 aaKnown RBP3.89□□□□□ -1.79
KTN1-217ENST00000554831 EXOSC4Q9NPD3 245 aaKnown RBP3.89□□□□□ -1.79
KTN1-217ENST00000554831 KLQ9UEF7 1012 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 OAZ3Q9UMX2 235 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 BTRCQ9Y297 605 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 PCDHB9Q9Y5E1 797 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 PNMA8CA0A1B0GUJ8 204 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 TMEM233B4DJY2 109 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 MSI1O43347 362 aaKnown RBP3.89□□□□□ -1.79
KTN1-217ENST00000554831 RPP40O75818 363 aaKnown RBP3.89□□□□□ -1.79
KTN1-217ENST00000554831 SIX3O95343 332 aaPredicted RBP3.89□□□□□ -1.79
KTN1-217ENST00000554831 KRT8P05787 483 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 ANXA5P08758 320 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 IQCF3P0C7M6 154 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 LINC00032P0C843 101 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 SMPD1P17405 629 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 GNPDA1P46926 289 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 GSK3BP49841 420 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 CLCNKBP51801 687 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 NEK2P51955 445 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 SLC5A3P53794 718 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 MS4A2Q01362 244 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 IL10RBQ08334 325 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 ACSM2AQ08AH3 577 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 CDH18Q13634 790 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 DMC1Q14565 340 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 ZNF460Q14592 562 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 PLCL1Q15111 1095 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 ZBTB6Q15916 424 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 PRAMEF19Q5SWL8 479 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 CCNYL2Q5T2Q4 361 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 FAM171A1Q5VUB5 890 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 RNF219Q5W0B1 726 aaPredicted RBP3.89□□□□□ -1.79
KTN1-217ENST00000554831 ACSM2BQ68CK6 577 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 AFTPHQ6ULP2 937 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 ARHGAP36Q6ZRI8 547 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 BEND5Q7L4P6 421 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 THAP5Q7Z6K1 395 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 GPR180Q86V85 440 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 OSTM1Q86WC4 334 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 CASP10Q92851 521 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 ZUFSPQ96AP4 578 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 SLC2A13Q96QE2 648 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 TBCDQ9BTW9 1192 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 C2orf49Q9BVC5 232 aaPredicted RBP3.89□□□□□ -1.79
KTN1-217ENST00000554831 LRRC3Q9BY71 257 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 TFB2MQ9H5Q4 396 aaKnown RBP3.89□□□□□ -1.79
KTN1-217ENST00000554831 ZFYVE28Q9HCC9 887 aa3.89□□□□□ -1.79
KTN1-217ENST00000554831 CNOT11Q9UKZ1 510 aaKnown RBP3.89□□□□□ -1.79
KTN1-217ENST00000554831 EMCNQ9ULC0 261 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms