RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 LHX6Q9UPM6 363 aa8.7□□□□□ -1.02
ACTN1-213ENST00000554508 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.7□□□□□ -1.02
ACTN1-213ENST00000554508 DSPP15924 2871 aaKnown RBP8.69□□□□□ -1.02
ACTN1-213ENST00000554508 ZFHX4Q86UP3 3567 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 GOLGA6CA6NDK9 693 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 GOLGA6BA6NDN3 693 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 TMX2-CTNND1H3BSU7 103 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 NTN3O00634 580 aaPredicted RBP8.69□□□□□ -1.02
ACTN1-213ENST00000554508 RRP8O43159 456 aaKnown RBP8.69□□□□□ -1.02
ACTN1-213ENST00000554508 MTSS1O43312 755 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 BRINP1O60477 761 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 CST8O60676 142 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 DXOO77932 396 aaKnown RBP8.69□□□□□ -1.02
ACTN1-213ENST00000554508 ZRANB2O95218 330 aaKnown RBP eCLIP8.69□□□□□ -1.02
ACTN1-213ENST00000554508 CLDN7O95471 211 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 IVLP07476 585 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 GOLGA6DP0CG33 693 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 GLB1P16278 677 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 EIF2S3P41091 472 aaKnown RBP8.69□□□□□ -1.02
ACTN1-213ENST00000554508 CDKN2BP42772 138 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 NAP1L1P55209 391 aaKnown RBP8.69□□□□□ -1.02
ACTN1-213ENST00000554508 DYNLT1P63172 113 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 CCZ1BP86790 482 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 CCZ1P86791 482 aaPredicted RBP8.69□□□□□ -1.02
ACTN1-213ENST00000554508 ILF3Q12906 894 aaKnown RBP eCLIP8.69□□□□□ -1.02
ACTN1-213ENST00000554508 SPIDRQ14159 915 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 PTPRRQ15256 657 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 QPCTQ16769 361 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 TBC1D25Q3MII6 688 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 C14orf28Q4W4Y0 310 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 TEX44Q53QW1 395 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 TFDP3Q5H9I0 405 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 KCTD16Q68DU8 428 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 CCDC70Q6NSX1 233 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 C11orf63Q6NUN7 778 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 IGF2-ASQ6U949 168 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 NPNTQ6UXI9 565 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 SPOCD1Q6ZMY3 1216 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 NYAP1Q6ZVC0 841 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 KATNAL2Q8IYT4 538 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 TXLNBQ8N3L3 684 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 KYQ8NBH2 561 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 EXD1Q8NHP7 514 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 SNIP1Q8TAD8 396 aaKnown RBP8.69□□□□□ -1.02
ACTN1-213ENST00000554508 KIAA1524Q8TCG1 905 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 SCAMP4Q969E2 229 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 CCDC74AQ96AQ1 378 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 IMP4Q96G21 291 aaKnown RBP8.69□□□□□ -1.02
ACTN1-213ENST00000554508 SCARF2Q96GP6 870 aaPredicted RBP8.69□□□□□ -1.02
ACTN1-213ENST00000554508 RBM41Q96IZ5 413 aaKnown RBP8.69□□□□□ -1.02
ACTN1-213ENST00000554508 HIC2Q96JB3 615 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 SRPK1Q96SB4 655 aaKnown RBP8.69□□□□□ -1.02
ACTN1-213ENST00000554508 GSDMCQ9BYG8 508 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 DPEP2Q9H4A9 486 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 POLR1BQ9H9Y6 1135 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 GOLGA6AQ9NYA3 693 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 PKD2L2Q9NZM6 624 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 SEPT10Q9P0V9 454 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 SIRPGQ9P1W8 387 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 CD84Q9UIB8 345 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 APPL1Q9UKG1 709 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 SLC17A4Q9Y2C5 497 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 REXO2Q9Y3B8 237 aaKnown RBP8.69□□□□□ -1.02
ACTN1-213ENST00000554508 HYOU1Q9Y4L1 999 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 PCDHB1Q9Y5F3 818 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 ENTPD2Q9Y5L3 495 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 SCN8AQ9UQD0 1980 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 CELSR3Q9NYQ7 3312 aa8.69□□□□□ -1.02
ACTN1-213ENST00000554508 A0A0U1RQS6 177 aa8.68□□□□□ -1.02
ACTN1-213ENST00000554508 C1orf232A0A0U1RR37 186 aa8.68□□□□□ -1.02
ACTN1-213ENST00000554508 ZW10O43264 779 aa8.68□□□□□ -1.02
ACTN1-213ENST00000554508 TLX3O43711 291 aaPredicted RBP8.68□□□□□ -1.02
ACTN1-213ENST00000554508 NUDT21O43809 227 aaKnown RBP8.68□□□□□ -1.02
ACTN1-213ENST00000554508 NOBOXO60393 691 aa8.68□□□□□ -1.02
ACTN1-213ENST00000554508 SOD1P00441 154 aa8.68□□□□□ -1.02
ACTN1-213ENST00000554508 FUCA1P04066 466 aa8.68□□□□□ -1.02
ACTN1-213ENST00000554508 MLLT3P42568 568 aaPredicted RBP8.68□□□□□ -1.02
ACTN1-213ENST00000554508 GNPDA1P46926 289 aa8.68□□□□□ -1.02
ACTN1-213ENST00000554508 SPINT3P49223 89 aa8.68□□□□□ -1.02
ACTN1-213ENST00000554508 VAV2P52735 878 aa8.68□□□□□ -1.02
ACTN1-213ENST00000554508 ERVPABLB-1P60509 514 aa8.68□□□□□ -1.02
ACTN1-213ENST00000554508 COPS2P61201 443 aa8.68□□□□□ -1.02
ACTN1-213ENST00000554508 GABREP78334 506 aa8.68□□□□□ -1.02
ACTN1-213ENST00000554508 CDK18Q07002 472 aa8.68□□□□□ -1.02
ACTN1-213ENST00000554508 KIF5AQ12840 1032 aa8.68□□□□□ -1.02
ACTN1-213ENST00000554508 HLTFQ14527 1009 aaKnown RBP eCLIP8.68□□□□□ -1.02
ACTN1-213ENST00000554508 PRKD1Q15139 912 aaPredicted RBP8.68□□□□□ -1.02
ACTN1-213ENST00000554508 TCEA2Q15560 299 aa8.68□□□□□ -1.02
ACTN1-213ENST00000554508 PPP2R5EQ16537 467 aa8.68□□□□□ -1.02
ACTN1-213ENST00000554508 COL28A1Q2UY09 1125 aa8.68□□□□□ -1.02
ACTN1-213ENST00000554508 CERCAMQ5T4B2 595 aa8.68□□□□□ -1.02
ACTN1-213ENST00000554508 KAZNQ674X7 775 aa8.68□□□□□ -1.02
ACTN1-213ENST00000554508 C19orf48Q6RUI8 117 aa8.68□□□□□ -1.02
ACTN1-213ENST00000554508 DAAM2Q86T65 1068 aa8.68□□□□□ -1.02
ACTN1-213ENST00000554508 C17orf82Q86X59 251 aaPredicted RBP8.68□□□□□ -1.02
ACTN1-213ENST00000554508 NRROSQ86YC3 692 aa8.68□□□□□ -1.02
ACTN1-213ENST00000554508 WDR36Q8NI36 951 aaKnown RBP8.68□□□□□ -1.02
ACTN1-213ENST00000554508 ZDHHC1Q8WTX9 485 aa8.68□□□□□ -1.02
ACTN1-213ENST00000554508 TFB1MQ8WVM0 346 aaKnown RBP8.68□□□□□ -1.02
ACTN1-213ENST00000554508 HNRNPLLQ8WVV9 542 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms