RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 SCG3Q8WXD2 468 aaKnown RBP13.04□□□□□ -0.32
SHMT2-211ENST00000554310 TSACCQ96A04 125 aaPredicted RBP13.04□□□□□ -0.32
SHMT2-211ENST00000554310 TEKT5Q96M29 485 aa13.04□□□□□ -0.32
SHMT2-211ENST00000554310 TRIB3Q96RU7 358 aa13.04□□□□□ -0.32
SHMT2-211ENST00000554310 RBM15Q96T37 977 aaKnown RBP eCLIP13.04□□□□□ -0.32
SHMT2-211ENST00000554310 VAT1Q99536 393 aa13.04□□□□□ -0.32
SHMT2-211ENST00000554310 BOCQ9BWV1 1114 aa13.04□□□□□ -0.32
SHMT2-211ENST00000554310 GLOD4Q9HC38 313 aa13.04□□□□□ -0.32
SHMT2-211ENST00000554310 TRIM10Q9UDY6 481 aa13.04□□□□□ -0.32
SHMT2-211ENST00000554310 U3KQA8 63 aa13.04□□□□□ -0.32
SHMT2-211ENST00000554310 MACROD2A1Z1Q3 448 aa13.03□□□□□ -0.32
SHMT2-211ENST00000554310 GOLGA6CA6NDK9 693 aa13.03□□□□□ -0.32
SHMT2-211ENST00000554310 GOLGA6BA6NDN3 693 aa13.03□□□□□ -0.32
SHMT2-211ENST00000554310 TMEM202A6NGA9 273 aa13.03□□□□□ -0.32
SHMT2-211ENST00000554310 ANKRD66B4E2M5 251 aa13.03□□□□□ -0.32
SHMT2-211ENST00000554310 YY2O15391 372 aa13.03□□□□□ -0.32
SHMT2-211ENST00000554310 TNFP01375 233 aa13.03□□□□□ -0.32
SHMT2-211ENST00000554310 GOLGA6DP0CG33 693 aa13.03□□□□□ -0.32
SHMT2-211ENST00000554310 CTSEP14091 401 aa13.03□□□□□ -0.32
SHMT2-211ENST00000554310 CETN2P41208 172 aa13.03□□□□□ -0.32
SHMT2-211ENST00000554310 TUBB4BP68371 445 aa13.03□□□□□ -0.32
SHMT2-211ENST00000554310 CDK3Q00526 305 aa13.03□□□□□ -0.32
SHMT2-211ENST00000554310 PTSQ03393 145 aa13.03□□□□□ -0.32
SHMT2-211ENST00000554310 WASHC5Q12768 1159 aa13.03□□□□□ -0.32
SHMT2-211ENST00000554310 XRCC4Q13426 336 aa13.03□□□□□ -0.32
SHMT2-211ENST00000554310 C1orf61Q13536 156 aa13.03□□□□□ -0.32
SHMT2-211ENST00000554310 NAA30Q147X3 362 aaPredicted RBP13.03□□□□□ -0.32
SHMT2-211ENST00000554310 PTPRRQ15256 657 aa13.03□□□□□ -0.32
SHMT2-211ENST00000554310 NR0B2Q15466 257 aa13.03□□□□□ -0.32
SHMT2-211ENST00000554310 WHAMMP3Q1A5X7 153 aa13.03□□□□□ -0.32
SHMT2-211ENST00000554310 CCDC181Q5TID7 509 aa13.03□□□□□ -0.32
SHMT2-211ENST00000554310 ADAMTSL4Q6UY14 1074 aa13.03□□□□□ -0.32
SHMT2-211ENST00000554310 RD3Q7Z3Z2 195 aa13.03□□□□□ -0.32
SHMT2-211ENST00000554310 NLRP8Q86W28 1048 aa13.03□□□□□ -0.32
SHMT2-211ENST00000554310 GKN2Q86XP6 184 aa13.03□□□□□ -0.32
SHMT2-211ENST00000554310 NRSN1Q8IZ57 195 aa13.03□□□□□ -0.32
SHMT2-211ENST00000554310 CACTIN-AS1Q8N1I8 211 aa13.03□□□□□ -0.32
SHMT2-211ENST00000554310 ZCCHC14Q8WYQ9 949 aaKnown RBP13.03□□□□□ -0.32
SHMT2-211ENST00000554310 OR1E3Q8WZA6 343 aa13.03□□□□□ -0.32
SHMT2-211ENST00000554310 UBXN4Q92575 508 aa13.03□□□□□ -0.32
SHMT2-211ENST00000554310 TADA1Q96BN2 335 aa13.03□□□□□ -0.32
SHMT2-211ENST00000554310 HAUS1Q96CS2 278 aa13.03□□□□□ -0.32
SHMT2-211ENST00000554310 AP2M1Q96CW1 435 aa13.03□□□□□ -0.32
SHMT2-211ENST00000554310 SMIM14Q96QK8 99 aa13.03□□□□□ -0.32
SHMT2-211ENST00000554310 MLPHQ9BV36 600 aaPredicted RBP13.03□□□□□ -0.32
SHMT2-211ENST00000554310 LGR4Q9BXB1 951 aa13.03□□□□□ -0.32
SHMT2-211ENST00000554310 OSBPL8Q9BZF1 889 aa13.03□□□□□ -0.32
SHMT2-211ENST00000554310 CLPBQ9H078 707 aa13.03□□□□□ -0.32
SHMT2-211ENST00000554310 GOLGA6AQ9NYA3 693 aa13.03□□□□□ -0.32
SHMT2-211ENST00000554310 DOLKQ9UPQ8 538 aa13.03□□□□□ -0.32
SHMT2-211ENST00000554310 ASXL3Q9C0F0 2248 aa13.03□□□□□ -0.32
SHMT2-211ENST00000554310 C1orf232A0A0U1RR37 186 aa13.02□□□□□ -0.33
SHMT2-211ENST00000554310 PRSS38A1L453 326 aa13.02□□□□□ -0.33
SHMT2-211ENST00000554310 RGSL1A5PLK6 1076 aa13.02□□□□□ -0.33
SHMT2-211ENST00000554310 MIF4GDA9UHW6 222 aaKnown RBP13.02□□□□□ -0.33
SHMT2-211ENST00000554310 RRP9O43818 475 aaKnown RBP13.02□□□□□ -0.33
SHMT2-211ENST00000554310 ZNF189O75820 626 aaPredicted RBP13.02□□□□□ -0.33
SHMT2-211ENST00000554310 SOD1P00441 154 aa13.02□□□□□ -0.33
SHMT2-211ENST00000554310 CELA2BP08218 269 aaPredicted RBP13.02□□□□□ -0.33
SHMT2-211ENST00000554310 GPR1P46091 355 aa13.02□□□□□ -0.33
SHMT2-211ENST00000554310 CDK18Q07002 472 aa13.02□□□□□ -0.33
SHMT2-211ENST00000554310 GALNT3Q14435 633 aa13.02□□□□□ -0.33
SHMT2-211ENST00000554310 NOMO1Q15155 1222 aa13.02□□□□□ -0.33
SHMT2-211ENST00000554310 CDKN3Q16667 212 aa13.02□□□□□ -0.33
SHMT2-211ENST00000554310 PAPD7Q5XG87 772 aaKnown RBP13.02□□□□□ -0.33
SHMT2-211ENST00000554310 KCTD16Q68DU8 428 aa13.02□□□□□ -0.33
SHMT2-211ENST00000554310 B4GALNT4Q76KP1 1039 aa13.02□□□□□ -0.33
SHMT2-211ENST00000554310 PEX26Q7Z412 305 aa13.02□□□□□ -0.33
SHMT2-211ENST00000554310 ZC3H18Q86VM9 953 aaKnown RBP13.02□□□□□ -0.33
SHMT2-211ENST00000554310 SLC35F3Q8IY50 421 aa13.02□□□□□ -0.33
SHMT2-211ENST00000554310 UBL4BQ8N7F7 174 aa13.02□□□□□ -0.33
SHMT2-211ENST00000554310 ARL10Q8N8L6 244 aa13.02□□□□□ -0.33
SHMT2-211ENST00000554310 LRRN4CLQ8ND94 238 aa13.02□□□□□ -0.33
SHMT2-211ENST00000554310 TRIM58Q8NG06 486 aa13.02□□□□□ -0.33
SHMT2-211ENST00000554310 IFI44Q8TCB0 444 aa13.02□□□□□ -0.33
SHMT2-211ENST00000554310 CCHCR1Q8TD31 782 aa13.02□□□□□ -0.33
SHMT2-211ENST00000554310 HTR3CQ8WXA8 447 aa13.02□□□□□ -0.33
SHMT2-211ENST00000554310 ALG3Q92685 438 aa13.02□□□□□ -0.33
SHMT2-211ENST00000554310 NAT6Q93015 286 aa13.02□□□□□ -0.33
SHMT2-211ENST00000554310 SRPK1Q96SB4 655 aaKnown RBP13.02□□□□□ -0.33
SHMT2-211ENST00000554310 FERMT1Q9BQL6 677 aa13.02□□□□□ -0.33
SHMT2-211ENST00000554310 HEMGNQ9BXL5 484 aa13.02□□□□□ -0.33
SHMT2-211ENST00000554310 FRMD8Q9BZ67 464 aaPredicted RBP13.02□□□□□ -0.33
SHMT2-211ENST00000554310 ABCG8Q9H221 673 aa13.02□□□□□ -0.33
SHMT2-211ENST00000554310 PKD2L2Q9NZM6 624 aa13.02□□□□□ -0.33
SHMT2-211ENST00000554310 KLHL8Q9P2G9 620 aaPredicted RBP13.02□□□□□ -0.33
SHMT2-211ENST00000554310 CD84Q9UIB8 345 aa13.02□□□□□ -0.33
SHMT2-211ENST00000554310 AMFRQ9UKV5 643 aa13.02□□□□□ -0.33
SHMT2-211ENST00000554310 MYLKQ15746 1914 aa13.01□□□□□ -0.33
SHMT2-211ENST00000554310 SCN8AQ9UQD0 1980 aa13.01□□□□□ -0.33
SHMT2-211ENST00000554310 A0A0U1RQS6 177 aa13.01□□□□□ -0.33
SHMT2-211ENST00000554310 EME2A4GXA9 379 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-211ENST00000554310 FAM149AA5PLN7 773 aa13.01□□□□□ -0.33
SHMT2-211ENST00000554310 TJP3O95049 919 aa13.01□□□□□ -0.33
SHMT2-211ENST00000554310 CLDN7O95471 211 aa13.01□□□□□ -0.33
SHMT2-211ENST00000554310 NDST3O95803 873 aa13.01□□□□□ -0.33
SHMT2-211ENST00000554310 MT-CYBP00156 380 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-211ENST00000554310 JUPP14923 745 aa13.01□□□□□ -0.33
SHMT2-211ENST00000554310 NFKB1P19838 968 aa13.01□□□□□ -0.33
SHMT2-211ENST00000554310 INSM1Q01101 510 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms