RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 CTBSQ01459 385 aa18.7■□□□□ 0.58
CPSF2-203ENST00000554290 PAFAH1B3Q15102 231 aaKnown RBP18.7■□□□□ 0.58
CPSF2-203ENST00000554290 PDK2Q15119 407 aa18.7■□□□□ 0.58
CPSF2-203ENST00000554290 IFI16Q16666 785 aaKnown RBP18.7■□□□□ 0.58
CPSF2-203ENST00000554290 AMZ1Q400G9 498 aa18.7■□□□□ 0.58
CPSF2-203ENST00000554290 TMEM164Q5U3C3 297 aa18.7■□□□□ 0.58
CPSF2-203ENST00000554290 LRRC66Q68CR7 880 aa18.7■□□□□ 0.58
CPSF2-203ENST00000554290 ADAMTSL4Q6UY14 1074 aa18.7■□□□□ 0.58
CPSF2-203ENST00000554290 ZNF765Q7L2R6 523 aa18.7■□□□□ 0.58
CPSF2-203ENST00000554290 ZNF438Q7Z4V0 828 aa18.7■□□□□ 0.58
CPSF2-203ENST00000554290 NLRP8Q86W28 1048 aa18.7■□□□□ 0.58
CPSF2-203ENST00000554290 ZNF564Q8TBZ8 553 aaPredicted RBP18.7■□□□□ 0.58
CPSF2-203ENST00000554290 AP2M1Q96CW1 435 aa18.7■□□□□ 0.58
CPSF2-203ENST00000554290 ABCG8Q9H221 673 aa18.7■□□□□ 0.58
CPSF2-203ENST00000554290 CTTNBP2NLQ9P2B4 639 aa18.7■□□□□ 0.58
CPSF2-203ENST00000554290 A0A0J9YYE9 177 aa18.69■□□□□ 0.58
CPSF2-203ENST00000554290 MFSD11O43934 449 aa18.69■□□□□ 0.58
CPSF2-203ENST00000554290 TRBC1P01850 177 aa18.69■□□□□ 0.58
CPSF2-203ENST00000554290 PLA2G2AP14555 144 aa18.69■□□□□ 0.58
CPSF2-203ENST00000554290 ITIH1P19827 911 aa18.69■□□□□ 0.58
CPSF2-203ENST00000554290 GJC1P36383 396 aa18.69■□□□□ 0.58
CPSF2-203ENST00000554290 ADCY8P40145 1251 aa18.69■□□□□ 0.58
CPSF2-203ENST00000554290 ARSEP51690 589 aa18.69■□□□□ 0.58
CPSF2-203ENST00000554290 MAPK10P53779 464 aa18.69■□□□□ 0.58
CPSF2-203ENST00000554290 OR1D5P58170 312 aa18.69■□□□□ 0.58
CPSF2-203ENST00000554290 DPYSL3Q14195 570 aa18.69■□□□□ 0.58
CPSF2-203ENST00000554290 LY6DQ14210 128 aa18.69■□□□□ 0.58
CPSF2-203ENST00000554290 NR1D2Q14995 579 aa18.69■□□□□ 0.58
CPSF2-203ENST00000554290 KIF26BQ2KJY2 2108 aa18.69■□□□□ 0.58
CPSF2-203ENST00000554290 ANKRD20A8PQ5CZ79 823 aa18.69■□□□□ 0.58
CPSF2-203ENST00000554290 KIAA1614Q5VZ46 1190 aa18.69■□□□□ 0.58
CPSF2-203ENST00000554290 NCBP2-AS2Q69YL0 99 aa18.69■□□□□ 0.58
CPSF2-203ENST00000554290 ALG1LQ6GMV1 187 aa18.69■□□□□ 0.58
CPSF2-203ENST00000554290 DOK6Q6PKX4 331 aa18.69■□□□□ 0.58
CPSF2-203ENST00000554290 MAML1Q92585 1016 aa18.69■□□□□ 0.58
CPSF2-203ENST00000554290 FATE1Q969F0 183 aa18.69■□□□□ 0.58
CPSF2-203ENST00000554290 TSGA13Q96PP4 275 aa18.69■□□□□ 0.58
CPSF2-203ENST00000554290 OR2M4Q96R27 311 aa18.69■□□□□ 0.58
CPSF2-203ENST00000554290 ZNF670Q9BS34 389 aa18.69■□□□□ 0.58
CPSF2-203ENST00000554290 SEMA6CQ9H3T2 930 aa18.69■□□□□ 0.58
CPSF2-203ENST00000554290 RDH14Q9HBH5 336 aa18.69■□□□□ 0.58
CPSF2-203ENST00000554290 RBM22Q9NW64 420 aaKnown RBP eCLIP18.69■□□□□ 0.58
CPSF2-203ENST00000554290 CD84Q9UIB8 345 aa18.69■□□□□ 0.58
CPSF2-203ENST00000554290 LCMT1Q9UIC8 334 aa18.69■□□□□ 0.58
CPSF2-203ENST00000554290 TTLL3Q9Y4R7 772 aa18.69■□□□□ 0.58
CPSF2-203ENST00000554290 PRAMEF33A0A0G2JMD5 474 aa18.68■□□□□ 0.58
CPSF2-203ENST00000554290 AGRPO00253 132 aa18.68■□□□□ 0.58
CPSF2-203ENST00000554290 PRAMEF10O60809 474 aa18.68■□□□□ 0.58
CPSF2-203ENST00000554290 MX2P20592 715 aa18.68■□□□□ 0.58
CPSF2-203ENST00000554290 ACTR1BP42025 376 aa18.68■□□□□ 0.58
CPSF2-203ENST00000554290 ACTR1AP61163 376 aa18.68■□□□□ 0.58
CPSF2-203ENST00000554290 DSC2Q02487 901 aa18.68■□□□□ 0.58
CPSF2-203ENST00000554290 PTSQ03393 145 aa18.68■□□□□ 0.58
CPSF2-203ENST00000554290 TGIF1Q15583 401 aa18.68■□□□□ 0.58
CPSF2-203ENST00000554290 ATP13A4Q4VNC1 1196 aa18.68■□□□□ 0.58
CPSF2-203ENST00000554290 USP53Q70EK8 1073 aa18.68■□□□□ 0.58
CPSF2-203ENST00000554290 TMPRSS9Q7Z410 1059 aa18.68■□□□□ 0.58
CPSF2-203ENST00000554290 RAVER1Q8IY67 606 aaKnown RBP18.68■□□□□ 0.58
CPSF2-203ENST00000554290 NRSN1Q8IZ57 195 aa18.68■□□□□ 0.58
CPSF2-203ENST00000554290 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.68■□□□□ 0.58
CPSF2-203ENST00000554290 EXD1Q8NHP7 514 aa18.68■□□□□ 0.58
CPSF2-203ENST00000554290 PTCD2Q8WV60 388 aaKnown RBP18.68■□□□□ 0.58
CPSF2-203ENST00000554290 USP7Q93009 1102 aa18.68■□□□□ 0.58
CPSF2-203ENST00000554290 SCAMP4Q969E2 229 aa18.68■□□□□ 0.58
CPSF2-203ENST00000554290 MED8Q96G25 268 aa18.68■□□□□ 0.58
CPSF2-203ENST00000554290 SCARF2Q96GP6 870 aaPredicted RBP18.68■□□□□ 0.58
CPSF2-203ENST00000554290 B3GNT4Q9C0J1 378 aa18.68■□□□□ 0.58
CPSF2-203ENST00000554290 UVRAGQ9P2Y5 699 aa18.68■□□□□ 0.58
CPSF2-203ENST00000554290 CHKBQ9Y259 395 aa18.68■□□□□ 0.58
CPSF2-203ENST00000554290 TMEM98Q9Y2Y6 226 aa18.68■□□□□ 0.58
CPSF2-203ENST00000554290 PCDHB11Q9Y5F2 797 aa18.68■□□□□ 0.58
CPSF2-203ENST00000554290 SMG1Q96Q15 3661 aaKnown RBP18.68■□□□□ 0.58
CPSF2-203ENST00000554290 A0A0U1RQS6 177 aa18.67■□□□□ 0.58
CPSF2-203ENST00000554290 HGSO14964 777 aaPredicted RBP18.67■□□□□ 0.58
CPSF2-203ENST00000554290 EFSO43281 561 aa18.67■□□□□ 0.58
CPSF2-203ENST00000554290 PROSCO94903 275 aa18.67■□□□□ 0.58
CPSF2-203ENST00000554290 SOD1P00441 154 aa18.67■□□□□ 0.58
CPSF2-203ENST00000554290 GYPCP04921 128 aa18.67■□□□□ 0.58
CPSF2-203ENST00000554290 KRT7P08729 469 aa18.67■□□□□ 0.58
CPSF2-203ENST00000554290 H2AFZP0C0S5 128 aa18.67■□□□□ 0.58
CPSF2-203ENST00000554290 CD1CP29017 333 aa18.67■□□□□ 0.58
CPSF2-203ENST00000554290 ETV5P41161 510 aa18.67■□□□□ 0.58
CPSF2-203ENST00000554290 STC1P52823 247 aa18.67■□□□□ 0.58
CPSF2-203ENST00000554290 RPL26P61254 145 aaKnown RBP18.67■□□□□ 0.58
CPSF2-203ENST00000554290 RFLNAQ6ZTI6 216 aa18.67■□□□□ 0.58
CPSF2-203ENST00000554290 H2AFVQ71UI9 128 aa18.67■□□□□ 0.58
CPSF2-203ENST00000554290 NAGSQ8N159 534 aa18.67■□□□□ 0.58
CPSF2-203ENST00000554290 CTNNBL1Q8WYA6 563 aaPredicted RBP18.67■□□□□ 0.58
CPSF2-203ENST00000554290 TDRD1Q9BXT4 1180 aaKnown RBP18.67■□□□□ 0.58
CPSF2-203ENST00000554290 IFNKQ9P0W0 207 aa18.67■□□□□ 0.58
CPSF2-203ENST00000554290 RPL26L1Q9UNX3 145 aaKnown RBP18.67■□□□□ 0.58
CPSF2-203ENST00000554290 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.67■□□□□ 0.58
CPSF2-203ENST00000554290 TPM3P06753 285 aa18.66■□□□□ 0.58
CPSF2-203ENST00000554290 CD82P27701 267 aa18.66■□□□□ 0.58
CPSF2-203ENST00000554290 CASP14P31944 242 aa18.66■□□□□ 0.58
CPSF2-203ENST00000554290 TRA2AQ13595 282 aaKnown RBP eCLIP18.66■□□□□ 0.58
CPSF2-203ENST00000554290 LRP8Q14114 963 aa18.66■□□□□ 0.58
CPSF2-203ENST00000554290 C16orf72Q14CZ0 275 aa18.66■□□□□ 0.58
CPSF2-203ENST00000554290 PYCR3Q53H96 274 aa18.66■□□□□ 0.58
CPSF2-203ENST00000554290 MANEAQ5SRI9 462 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms