RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 CCNHP51946 323 aaPredicted RBP16.9■□□□□ 0.3
NEK9-204ENST00000554258 BIRC2Q13490 618 aa16.9■□□□□ 0.3
NEK9-204ENST00000554258 SPA17Q15506 151 aa16.9■□□□□ 0.3
NEK9-204ENST00000554258 NKAIN2Q5VXU1 208 aa16.9■□□□□ 0.3
NEK9-204ENST00000554258 Q8NA96 180 aa16.9■□□□□ 0.3
NEK9-204ENST00000554258 NT5C3BQ969T7 300 aa16.9■□□□□ 0.3
NEK9-204ENST00000554258 WDR92Q96MX6 357 aa16.9■□□□□ 0.3
NEK9-204ENST00000554258 TWSG1Q9GZX9 223 aa16.9■□□□□ 0.3
NEK9-204ENST00000554258 ZMYND15Q9H091 742 aa16.9■□□□□ 0.3
NEK9-204ENST00000554258 THAP2Q9H0W7 228 aa16.9■□□□□ 0.3
NEK9-204ENST00000554258 KCNF1Q9H3M0 494 aa16.9■□□□□ 0.3
NEK9-204ENST00000554258 PARVAQ9NVD7 372 aa16.9■□□□□ 0.3
NEK9-204ENST00000554258 CNOT8Q9UFF9 292 aaKnown RBP16.9■□□□□ 0.3
NEK9-204ENST00000554258 VANGL2Q9ULK5 521 aa16.9■□□□□ 0.3
NEK9-204ENST00000554258 TBC1D30Q9Y2I9 924 aa16.9■□□□□ 0.3
NEK9-204ENST00000554258 DGKBQ9Y6T7 804 aa16.9■□□□□ 0.3
NEK9-204ENST00000554258 FAM170AA1A519 330 aa16.89■□□□□ 0.29
NEK9-204ENST00000554258 GOLGA8SH3BPF8 625 aa16.89■□□□□ 0.29
NEK9-204ENST00000554258 KATNA1O75449 491 aa16.89■□□□□ 0.29
NEK9-204ENST00000554258 CLDN11O75508 207 aa16.89■□□□□ 0.29
NEK9-204ENST00000554258 DAB1O75553 588 aa16.89■□□□□ 0.29
NEK9-204ENST00000554258 RHOCP08134 193 aa16.89■□□□□ 0.29
NEK9-204ENST00000554258 KRT3P12035 628 aa16.89■□□□□ 0.29
NEK9-204ENST00000554258 MC2RQ01718 297 aa16.89■□□□□ 0.29
NEK9-204ENST00000554258 EIF4EBP2Q13542 120 aaPredicted RBP16.89■□□□□ 0.29
NEK9-204ENST00000554258 SEMA5AQ13591 1074 aa16.89■□□□□ 0.29
NEK9-204ENST00000554258 NR1D2Q14995 579 aa16.89■□□□□ 0.29
NEK9-204ENST00000554258 TESK1Q15569 626 aa16.89■□□□□ 0.29
NEK9-204ENST00000554258 FAM102AQ5T9C2 384 aaPredicted RBP16.89■□□□□ 0.29
NEK9-204ENST00000554258 SYPL2Q5VXT5 272 aa16.89■□□□□ 0.29
NEK9-204ENST00000554258 KCTD16Q68DU8 428 aa16.89■□□□□ 0.29
NEK9-204ENST00000554258 TRNP1Q6NT89 227 aa16.89■□□□□ 0.29
NEK9-204ENST00000554258 DNAJC24Q6P3W2 148 aa16.89■□□□□ 0.29
NEK9-204ENST00000554258 BNIPLQ7Z465 357 aa16.89■□□□□ 0.29
NEK9-204ENST00000554258 DEFB106AQ8N104 65 aa16.89■□□□□ 0.29
NEK9-204ENST00000554258 DCAF4L2Q8NA75 395 aa16.89■□□□□ 0.29
NEK9-204ENST00000554258 CXorf40AQ8TE69 158 aa16.89■□□□□ 0.29
NEK9-204ENST00000554258 ZNF653Q96CK0 615 aa16.89■□□□□ 0.29
NEK9-204ENST00000554258 C19orf60Q96EN9 201 aa16.89■□□□□ 0.29
NEK9-204ENST00000554258 APOOQ9BUR5 198 aa16.89■□□□□ 0.29
NEK9-204ENST00000554258 TMEM9Q9P0T7 183 aa16.89■□□□□ 0.29
NEK9-204ENST00000554258 CROTQ9UKG9 612 aa16.89■□□□□ 0.29
NEK9-204ENST00000554258 OR1A2Q9Y585 309 aa16.89■□□□□ 0.29
NEK9-204ENST00000554258 ADGRG1Q9Y653 693 aa16.89■□□□□ 0.29
NEK9-204ENST00000554258 TMEM191CA6NGB0 347 aa16.88■□□□□ 0.29
NEK9-204ENST00000554258 C2CD4BA6NLJ0 364 aa16.88■□□□□ 0.29
NEK9-204ENST00000554258 PJA2O43164 708 aa16.88■□□□□ 0.29
NEK9-204ENST00000554258 ZNF821O75541 412 aaPredicted RBP16.88■□□□□ 0.29
NEK9-204ENST00000554258 DLGAP3O95886 979 aa16.88■□□□□ 0.29
NEK9-204ENST00000554258 TRUB2O95900 331 aaKnown RBP16.88■□□□□ 0.29
NEK9-204ENST00000554258 IGLV3-25P01717 112 aa16.88■□□□□ 0.29
NEK9-204ENST00000554258 PTMAP06454 111 aaKnown RBP16.88■□□□□ 0.29
NEK9-204ENST00000554258 CSF2RBP32927 897 aa16.88■□□□□ 0.29
NEK9-204ENST00000554258 RFC1P35251 1148 aaPredicted RBP16.88■□□□□ 0.29
NEK9-204ENST00000554258 FLT3P36888 993 aa16.88■□□□□ 0.29
NEK9-204ENST00000554258 PER3P56645 1201 aa16.88■□□□□ 0.29
NEK9-204ENST00000554258 RNASE9P60153 205 aaKnown RBP16.88■□□□□ 0.29
NEK9-204ENST00000554258 AUHQ13825 339 aaKnown RBP16.88■□□□□ 0.29
NEK9-204ENST00000554258 LRRC14Q15048 493 aa16.88■□□□□ 0.29
NEK9-204ENST00000554258 CARD16Q5EG05 197 aa16.88■□□□□ 0.29
NEK9-204ENST00000554258 PHLDB2Q86SQ0 1253 aa16.88■□□□□ 0.29
NEK9-204ENST00000554258 PCDH20Q8N6Y1 951 aaKnown RBP16.88■□□□□ 0.29
NEK9-204ENST00000554258 JOSD2Q8TAC2 188 aa16.88■□□□□ 0.29
NEK9-204ENST00000554258 NANOS1Q8WY41 292 aaKnown RBP16.88■□□□□ 0.29
NEK9-204ENST00000554258 NPY6RQ99463 290 aa16.88■□□□□ 0.29
NEK9-204ENST00000554258 DPYSL5Q9BPU6 564 aa16.88■□□□□ 0.29
NEK9-204ENST00000554258 SELENOOQ9BVL4 669 aa16.88■□□□□ 0.29
NEK9-204ENST00000554258 LUC7LQ9NQ29 371 aaKnown RBP16.88■□□□□ 0.29
NEK9-204ENST00000554258 METTL5Q9NRN9 209 aaKnown RBP16.88■□□□□ 0.29
NEK9-204ENST00000554258 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.88■□□□□ 0.29
NEK9-204ENST00000554258 PCDHGA9Q9Y5G4 932 aaKnown RBP16.88■□□□□ 0.29
NEK9-204ENST00000554258 SCINQ9Y6U3 715 aa16.88■□□□□ 0.29
NEK9-204ENST00000554258 PIPSLA2A3N6 862 aa16.87■□□□□ 0.29
NEK9-204ENST00000554258 RCCD1A6NED2 376 aa16.87■□□□□ 0.29
NEK9-204ENST00000554258 BTNL10A8MVZ5 291 aa16.87■□□□□ 0.29
NEK9-204ENST00000554258 NRDCO43847 1150 aa16.87■□□□□ 0.29
NEK9-204ENST00000554258 GRAP2O75791 330 aa16.87■□□□□ 0.29
NEK9-204ENST00000554258 MTA2O94776 668 aa16.87■□□□□ 0.29
NEK9-204ENST00000554258 GPR3P46089 330 aa16.87■□□□□ 0.29
NEK9-204ENST00000554258 RPL7AP62424 266 aaKnown RBP16.87■□□□□ 0.29
NEK9-204ENST00000554258 MAP7Q14244 749 aa16.87■□□□□ 0.29
NEK9-204ENST00000554258 ZNF805Q5CZA5 627 aa16.87■□□□□ 0.29
NEK9-204ENST00000554258 LRRC73Q5JTD7 316 aa16.87■□□□□ 0.29
NEK9-204ENST00000554258 RYBPQ8N488 228 aaPredicted RBP16.87■□□□□ 0.29
NEK9-204ENST00000554258 ACRBPQ8NEB7 543 aa16.87■□□□□ 0.29
NEK9-204ENST00000554258 FNIP1Q8TF40 1166 aa16.87■□□□□ 0.29
NEK9-204ENST00000554258 CTNNBL1Q8WYA6 563 aaPredicted RBP16.87■□□□□ 0.29
NEK9-204ENST00000554258 OR1E3Q8WZA6 343 aa16.87■□□□□ 0.29
NEK9-204ENST00000554258 CENPIQ92674 756 aaPredicted RBP16.87■□□□□ 0.29
NEK9-204ENST00000554258 PGAP3Q96FM1 320 aaPredicted RBP16.87■□□□□ 0.29
NEK9-204ENST00000554258 WRAP53Q9BUR4 548 aaKnown RBP16.87■□□□□ 0.29
NEK9-204ENST00000554258 CEP44Q9C0F1 390 aa16.87■□□□□ 0.29
NEK9-204ENST00000554258 TMEM168Q9H0V1 697 aa16.87■□□□□ 0.29
NEK9-204ENST00000554258 MRPL47Q9HD33 250 aaKnown RBP16.87■□□□□ 0.29
NEK9-204ENST00000554258 APMAPQ9HDC9 416 aa16.87■□□□□ 0.29
NEK9-204ENST00000554258 TMEM51Q9NW97 253 aa16.87■□□□□ 0.29
NEK9-204ENST00000554258 UVRAGQ9P2Y5 699 aa16.87■□□□□ 0.29
NEK9-204ENST00000554258 A0A0A6YYK5 440 aaPredicted RBP16.86■□□□□ 0.29
NEK9-204ENST00000554258 AREL1O15033 823 aa16.86■□□□□ 0.29
NEK9-204ENST00000554258 ATMINO43313 823 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms