RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 EPC1Q9H2F5 836 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 C10orf88Q9H8K7 445 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 NT5MQ9NPB1 228 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 TRPV5Q9NQA5 729 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 DNAJC17Q9NVM6 304 aaKnown RBP5.06□□□□□ -1.6
VTI1B-202ENST00000553619 PLK2Q9NYY3 685 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 GRHL1Q9NZI5 618 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 FBXL21Q9UKT6 434 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 TCFL5Q9UL49 500 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 OR51B4Q9Y5P0 310 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 PCNTO95613 3336 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 HTTP42858 3142 aa5.06□□□□□ -1.6
VTI1B-202ENST00000553619 DOCK8Q8NF50 2099 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 ESYT3A0FGR9 886 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 TBC1D3BA6NDS4 549 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 B8ZZF3 427 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 ANHXE9PGG2 379 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 ALOX15BO15296 676 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 INSIG1O15503 277 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 OPA1O60313 960 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 DNAJA2O60884 412 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 SEMA7AO75326 666 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 TULP3O75386 442 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 ZMPSTE24O75844 475 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 SUN1O94901 812 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 METTL18O95568 372 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 TTC4O95801 387 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 IGSF6O95976 241 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 GSRP00390 522 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 HLA-DQB2P05538 268 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 DLDP09622 509 aaKnown RBP5.05□□□□□ -1.6
VTI1B-202ENST00000553619 CISD3P0C7P0 127 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 ALADP13716 330 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 H2AFXP16104 143 aaPredicted RBP5.05□□□□□ -1.6
VTI1B-202ENST00000553619 HLA-DPA1P20036 260 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 FCARP24071 287 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 PSMB4P28070 264 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 HLA-FP30511 346 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 CD70P32970 193 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 BUD31P41223 144 aaPredicted RBP5.05□□□□□ -1.6
VTI1B-202ENST00000553619 GRIA2P42262 883 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 MAGEA4P43358 317 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 TNFRSF4P43489 277 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 SCNN1BP51168 640 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 SGSHP51688 502 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 EIF3BP55884 814 aaKnown RBP5.05□□□□□ -1.6
VTI1B-202ENST00000553619 AP1S1P61966 158 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 POLR2LP62875 67 aaKnown RBP5.05□□□□□ -1.6
VTI1B-202ENST00000553619 ECT2LQ008S8 904 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 PDE1BQ01064 536 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 BCL2L1Q07817 233 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 IFFO1Q0D2I5 559 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 SLC10A7Q0GE19 358 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 CCDC15Q0P6D6 951 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 ILF2Q12905 390 aaKnown RBP5.05□□□□□ -1.6
VTI1B-202ENST00000553619 PDIA2Q13087 525 aaKnown RBP5.05□□□□□ -1.6
VTI1B-202ENST00000553619 ZBTB17Q13105 803 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 KCNJ11Q14654 390 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 CYTH1Q15438 398 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 SMAD2Q15796 467 aaKnown RBP5.05□□□□□ -1.6
VTI1B-202ENST00000553619 CARD16Q5EG05 197 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 FSCBQ5H9T9 825 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 PITRM1Q5JRX3 1037 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 BEND6Q5SZJ8 279 aaPredicted RBP5.05□□□□□ -1.6
VTI1B-202ENST00000553619 SDE2Q6IQ49 451 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 PARM1Q6UWI2 310 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 ZDHHC24Q6UX98 284 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 ARHGAP36Q6ZRI8 547 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 NLRP9Q7RTR0 991 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 MTERF4Q7Z6M4 381 aaKnown RBP5.05□□□□□ -1.6
VTI1B-202ENST00000553619 SRLQ86TD4 932 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 PRUNE1Q86TP1 453 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 CCDC25Q86WR0 208 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 APCDD1Q8J025 514 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 MREGQ8N565 214 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 PAF1Q8N7H5 531 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 CNTD1Q8N815 330 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 NAT16Q8N8M0 369 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 GLIS1Q8NBF1 620 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 AENQ8WTP8 325 aaKnown RBP5.05□□□□□ -1.6
VTI1B-202ENST00000553619 UBLCP1Q8WVY7 318 aaPredicted RBP5.05□□□□□ -1.6
VTI1B-202ENST00000553619 ANKRD7Q92527 254 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 PRCCQ92733 491 aaPredicted RBP5.05□□□□□ -1.6
VTI1B-202ENST00000553619 DNASE1L2Q92874 299 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 MYEOVQ96EZ4 313 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 IMP4Q96G21 291 aaKnown RBP5.05□□□□□ -1.6
VTI1B-202ENST00000553619 LRIG1Q96JA1 1093 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 GDAP1L1Q96MZ0 367 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 NUDCD1Q96RS6 583 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 TUBGCP5Q96RT8 1024 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 SEMA3CQ99985 751 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 TBL1YQ9BQ87 522 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 MGME1Q9BQP7 344 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 ADGRE3Q9BY15 652 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 HDAC8Q9BY41 377 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 CPEB1Q9BZB8 566 aaKnown RBP5.05□□□□□ -1.6
VTI1B-202ENST00000553619 PLA2G2FQ9BZM2 168 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 ROPN1BQ9BZX4 212 aaPredicted RBP5.05□□□□□ -1.6
VTI1B-202ENST00000553619 IL22Q9GZX6 179 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 EBF3Q9H4W6 596 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms