RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 RHOAP61586 193 aa11.34□□□□□ -0.59
SUPT16H-202ENST00000552829 SEMA5AQ13591 1074 aa11.34□□□□□ -0.59
SUPT16H-202ENST00000552829 GRM3Q14832 879 aa11.34□□□□□ -0.59
SUPT16H-202ENST00000552829 KRT31Q15323 416 aa11.34□□□□□ -0.59
SUPT16H-202ENST00000552829 INPP5JQ15735 1006 aaPredicted RBP11.34□□□□□ -0.59
SUPT16H-202ENST00000552829 KRTAP21-3Q3LHN1 58 aa11.34□□□□□ -0.59
SUPT16H-202ENST00000552829 CCDC40Q4G0X9 1142 aa11.34□□□□□ -0.59
SUPT16H-202ENST00000552829 RAB6CQ53S08 254 aa11.34□□□□□ -0.59
SUPT16H-202ENST00000552829 SLC30A9Q6PML9 568 aa11.34□□□□□ -0.59
SUPT16H-202ENST00000552829 SLC34A3Q8N130 599 aa11.34□□□□□ -0.59
SUPT16H-202ENST00000552829 TRIM44Q96DX7 344 aaPredicted RBP11.34□□□□□ -0.59
SUPT16H-202ENST00000552829 SCARF2Q96GP6 870 aaPredicted RBP11.34□□□□□ -0.59
SUPT16H-202ENST00000552829 MRFAP1L1Q96HT8 127 aa11.34□□□□□ -0.59
SUPT16H-202ENST00000552829 TEX101Q9BY14 249 aa11.34□□□□□ -0.59
SUPT16H-202ENST00000552829 TRIM55Q9BYV6 548 aa11.34□□□□□ -0.59
SUPT16H-202ENST00000552829 RAB6CQ9H0N0 254 aa11.34□□□□□ -0.59
SUPT16H-202ENST00000552829 MOSPD1Q9UJG1 213 aa11.34□□□□□ -0.59
SUPT16H-202ENST00000552829 TMEM59LQ9UK28 342 aa11.34□□□□□ -0.59
SUPT16H-202ENST00000552829 CROTQ9UKG9 612 aa11.34□□□□□ -0.59
SUPT16H-202ENST00000552829 PCDHGA6Q9Y5G7 932 aa11.34□□□□□ -0.59
SUPT16H-202ENST00000552829 NAV3Q8IVL0 2385 aa11.33□□□□□ -0.6
SUPT16H-202ENST00000552829 MDC1Q14676 2089 aaKnown RBP11.33□□□□□ -0.6
SUPT16H-202ENST00000552829 A8MU76 341 aa11.33□□□□□ -0.6
SUPT16H-202ENST00000552829 POLR1CO15160 346 aaPredicted RBP11.33□□□□□ -0.6
SUPT16H-202ENST00000552829 DNAJB5O75953 348 aa11.33□□□□□ -0.6
SUPT16H-202ENST00000552829 LRIG2O94898 1065 aa11.33□□□□□ -0.6
SUPT16H-202ENST00000552829 IVLP07476 585 aa11.33□□□□□ -0.6
SUPT16H-202ENST00000552829 PRF1P14222 555 aa11.33□□□□□ -0.6
SUPT16H-202ENST00000552829 ZNF28P17035 718 aa11.33□□□□□ -0.6
SUPT16H-202ENST00000552829 ADCY8P40145 1251 aa11.33□□□□□ -0.6
SUPT16H-202ENST00000552829 MTIF2P46199 727 aaKnown RBP11.33□□□□□ -0.6
SUPT16H-202ENST00000552829 PRR30Q53SZ7 412 aaPredicted RBP11.33□□□□□ -0.6
SUPT16H-202ENST00000552829 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.33□□□□□ -0.6
SUPT16H-202ENST00000552829 ARCQ7LC44 396 aa11.33□□□□□ -0.6
SUPT16H-202ENST00000552829 LYSMD3Q7Z3D4 306 aa11.33□□□□□ -0.6
SUPT16H-202ENST00000552829 XYLT1Q86Y38 959 aa11.33□□□□□ -0.6
SUPT16H-202ENST00000552829 DNAAF5Q86Y56 855 aa11.33□□□□□ -0.6
SUPT16H-202ENST00000552829 CAMK1DQ8IU85 385 aa11.33□□□□□ -0.6
SUPT16H-202ENST00000552829 CBARPQ8N350 705 aaPredicted RBP11.33□□□□□ -0.6
SUPT16H-202ENST00000552829 Q8NA96 180 aa11.33□□□□□ -0.6
SUPT16H-202ENST00000552829 ANKRD20A12PQ8NF67 263 aa11.33□□□□□ -0.6
SUPT16H-202ENST00000552829 ECHDC3Q96DC8 303 aa11.33□□□□□ -0.6
SUPT16H-202ENST00000552829 COQ10AQ96MF6 247 aa11.33□□□□□ -0.6
SUPT16H-202ENST00000552829 VPS16Q9H269 839 aa11.33□□□□□ -0.6
SUPT16H-202ENST00000552829 SUFUQ9UMX1 484 aa11.33□□□□□ -0.6
SUPT16H-202ENST00000552829 PCDHGA9Q9Y5G4 932 aaKnown RBP11.33□□□□□ -0.6
SUPT16H-202ENST00000552829 OAS3Q9Y6K5 1087 aaKnown RBP11.33□□□□□ -0.6
SUPT16H-202ENST00000552829 CCDC168Q8NDH2 2452 aa11.33□□□□□ -0.6
SUPT16H-202ENST00000552829 CROCCQ5TZA2 2017 aa11.32□□□□□ -0.6
SUPT16H-202ENST00000552829 TACC2O95359 2948 aa11.32□□□□□ -0.6
SUPT16H-202ENST00000552829 PES1O00541 588 aaKnown RBP11.32□□□□□ -0.6
SUPT16H-202ENST00000552829 TEX33O43247 280 aa11.32□□□□□ -0.6
SUPT16H-202ENST00000552829 CREG1O75629 220 aa11.32□□□□□ -0.6
SUPT16H-202ENST00000552829 ELFN1P0C7U0 828 aa11.32□□□□□ -0.6
SUPT16H-202ENST00000552829 USP8P40818 1118 aa11.32□□□□□ -0.6
SUPT16H-202ENST00000552829 GNPDA1P46926 289 aa11.32□□□□□ -0.6
SUPT16H-202ENST00000552829 CSNK1DP48730 415 aa11.32□□□□□ -0.6
SUPT16H-202ENST00000552829 BIRC2Q13490 618 aa11.32□□□□□ -0.6
SUPT16H-202ENST00000552829 PEX6Q13608 980 aa11.32□□□□□ -0.6
SUPT16H-202ENST00000552829 FILIP1LQ4L180 1135 aa11.32□□□□□ -0.6
SUPT16H-202ENST00000552829 TCP11X2Q5H9J9 407 aa11.32□□□□□ -0.6
SUPT16H-202ENST00000552829 SNAP47Q5SQN1 464 aa11.32□□□□□ -0.6
SUPT16H-202ENST00000552829 FAM102AQ5T9C2 384 aaPredicted RBP11.32□□□□□ -0.6
SUPT16H-202ENST00000552829 RWDD4Q6NW29 188 aaKnown RBP11.32□□□□□ -0.6
SUPT16H-202ENST00000552829 C6orf15Q6UXA7 325 aaPredicted RBP11.32□□□□□ -0.6
SUPT16H-202ENST00000552829 DPPA4Q7L190 304 aa11.32□□□□□ -0.6
SUPT16H-202ENST00000552829 ZNF761Q86XN6 746 aaPredicted RBP11.32□□□□□ -0.6
SUPT16H-202ENST00000552829 SFRP1Q8N474 314 aa11.32□□□□□ -0.6
SUPT16H-202ENST00000552829 OR10G6Q8NH81 332 aa11.32□□□□□ -0.6
SUPT16H-202ENST00000552829 PRR7Q8TB68 274 aa11.32□□□□□ -0.6
SUPT16H-202ENST00000552829 C18orf8Q96DM3 657 aa11.32□□□□□ -0.6
SUPT16H-202ENST00000552829 EXOC2Q96KP1 924 aa11.32□□□□□ -0.6
SUPT16H-202ENST00000552829 FAM81BQ96LP2 452 aa11.32□□□□□ -0.6
SUPT16H-202ENST00000552829 CFAP57Q96MR6 1250 aa11.32□□□□□ -0.6
SUPT16H-202ENST00000552829 TUBGCP5Q96RT8 1024 aa11.32□□□□□ -0.6
SUPT16H-202ENST00000552829 SYNCQ9H7C4 482 aa11.32□□□□□ -0.6
SUPT16H-202ENST00000552829 PLCB1Q9NQ66 1216 aa11.32□□□□□ -0.6
SUPT16H-202ENST00000552829 PHPT1Q9NRX4 125 aaPredicted RBP11.32□□□□□ -0.6
SUPT16H-202ENST00000552829 LIMA1Q9UHB6 759 aaKnown RBP11.32□□□□□ -0.6
SUPT16H-202ENST00000552829 SLC17A4Q9Y2C5 497 aa11.32□□□□□ -0.6
SUPT16H-202ENST00000552829 PLEKHM1Q9Y4G2 1056 aa11.32□□□□□ -0.6
SUPT16H-202ENST00000552829 SEC16AO15027 2179 aa11.32□□□□□ -0.6
SUPT16H-202ENST00000552829 A0A1B0GTH6 734 aa11.31□□□□□ -0.6
SUPT16H-202ENST00000552829 CDC14CA4D256 554 aa11.31□□□□□ -0.6
SUPT16H-202ENST00000552829 GOLGA6L6A8MZA4 724 aa11.31□□□□□ -0.6
SUPT16H-202ENST00000552829 MAP3K6O95382 1288 aa11.31□□□□□ -0.6
SUPT16H-202ENST00000552829 CBX6O95503 412 aa11.31□□□□□ -0.6
SUPT16H-202ENST00000552829 FGFR1OPO95684 399 aaKnown RBP11.31□□□□□ -0.6
SUPT16H-202ENST00000552829 PLEKP08567 350 aaPredicted RBP11.31□□□□□ -0.6
SUPT16H-202ENST00000552829 TEAD1P28347 426 aa11.31□□□□□ -0.6
SUPT16H-202ENST00000552829 KRT9P35527 623 aa11.31□□□□□ -0.6
SUPT16H-202ENST00000552829 POLD2P49005 469 aa11.31□□□□□ -0.6
SUPT16H-202ENST00000552829 PGDP52209 483 aa11.31□□□□□ -0.6
SUPT16H-202ENST00000552829 NDST2P52849 883 aa11.31□□□□□ -0.6
SUPT16H-202ENST00000552829 YBEYP58557 167 aaPredicted RBP11.31□□□□□ -0.6
SUPT16H-202ENST00000552829 APBA1Q02410 837 aa11.31□□□□□ -0.6
SUPT16H-202ENST00000552829 PTK2Q05397 1052 aa11.31□□□□□ -0.6
SUPT16H-202ENST00000552829 TRIM65Q6PJ69 517 aa11.31□□□□□ -0.6
SUPT16H-202ENST00000552829 APTXQ7Z2E3 356 aaKnown RBP11.31□□□□□ -0.6
SUPT16H-202ENST00000552829 SLC47A2Q86VL8 602 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms