RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 ADAMTS20P59510 1910 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 PLXND1Q9Y4D7 1925 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 CTAGE9A4FU28 777 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 NEMP2A6NFY4 417 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 EIF4E1BA6NMX2 242 aaKnown RBP10.59□□□□□ -0.71
PTCH1-225ENST00000551845 E7EVH7 732 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 H3BM21 787 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 PGRMC1O00264 195 aaKnown RBP10.59□□□□□ -0.71
PTCH1-225ENST00000551845 FLRT2O43155 660 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 SH3BP5O60239 455 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 TNFP01375 233 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 C1SP09871 688 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 ATXN1LP0C7T5 689 aaKnown RBP10.59□□□□□ -0.71
PTCH1-225ENST00000551845 PIRTP0C851 137 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 TEAD1P28347 426 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 HMGCLP35914 325 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 FDFT1P37268 417 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 KCNJ1P48048 391 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 SPINT3P49223 89 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 LMAN1P49257 510 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 IL9RQ01113 521 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 PPARDQ03181 441 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 SPARCL1Q14515 664 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 NFATC4Q14934 902 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 SHBQ15464 509 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 SOWAHCQ53LP3 525 aaPredicted RBP10.59□□□□□ -0.71
PTCH1-225ENST00000551845 HS1BP3Q53T59 392 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 ZNF542PQ5EBM4 170 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 FAXCQ5TGI0 409 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 PAPD7Q5XG87 772 aaKnown RBP10.59□□□□□ -0.71
PTCH1-225ENST00000551845 RAET1GQ6H3X3 334 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 ZNF765Q7L2R6 523 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 LYSMD3Q7Z3D4 306 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 LINC00523Q86TU6 105 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 PDCD7Q8N8D1 485 aaKnown RBP10.59□□□□□ -0.71
PTCH1-225ENST00000551845 PRELID2Q8N945 189 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 BLOC1S5Q8TDH9 187 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 SAP25Q8TEE9 199 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 SCAMP4Q969E2 229 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 NAPGQ99747 312 aaPredicted RBP10.59□□□□□ -0.71
PTCH1-225ENST00000551845 TBL1YQ9BQ87 522 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 FICDQ9BVA6 458 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 RIOK2Q9BVS4 552 aaKnown RBP10.59□□□□□ -0.71
PTCH1-225ENST00000551845 AP1M1Q9BXS5 423 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 WDR26Q9H7D7 661 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 LRRC40Q9H9A6 602 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 ETNK1Q9HBU6 452 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 PHPT1Q9NRX4 125 aaPredicted RBP10.59□□□□□ -0.71
PTCH1-225ENST00000551845 CD84Q9UIB8 345 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 ZNF711Q9Y462 761 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 OR1A2Q9Y585 309 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 SAR1BQ9Y6B6 198 aa10.59□□□□□ -0.71
PTCH1-225ENST00000551845 FASNP49327 2511 aaKnown RBP10.58□□□□□ -0.72
PTCH1-225ENST00000551845 GOLGA6L10A0A0M3HER8 536 aa10.58□□□□□ -0.72
PTCH1-225ENST00000551845 C2orf81A6NN90 581 aa10.58□□□□□ -0.72
PTCH1-225ENST00000551845 ERI2A8K979 691 aaKnown RBP10.58□□□□□ -0.72
PTCH1-225ENST00000551845 TNFRSF10CO14798 259 aa10.58□□□□□ -0.72
PTCH1-225ENST00000551845 CTSEP14091 401 aa10.58□□□□□ -0.72
PTCH1-225ENST00000551845 ETS1P14921 441 aa10.58□□□□□ -0.72
PTCH1-225ENST00000551845 NME1P15531 152 aaKnown RBP10.58□□□□□ -0.72
PTCH1-225ENST00000551845 JUNDP17535 347 aa10.58□□□□□ -0.72
PTCH1-225ENST00000551845 EPHA8P29322 1005 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-225ENST00000551845 ADRA1AP35348 466 aa10.58□□□□□ -0.72
PTCH1-225ENST00000551845 PAFAH1B1P43034 410 aa10.58□□□□□ -0.72
PTCH1-225ENST00000551845 GRK6P43250 576 aa10.58□□□□□ -0.72
PTCH1-225ENST00000551845 CHRNA4P43681 627 aa10.58□□□□□ -0.72
PTCH1-225ENST00000551845 KIAA1024LP59773 190 aa10.58□□□□□ -0.72
PTCH1-225ENST00000551845 EIF2B5Q13144 721 aaKnown RBP10.58□□□□□ -0.72
PTCH1-225ENST00000551845 INAVAQ3KP66 663 aa10.58□□□□□ -0.72
PTCH1-225ENST00000551845 ZDHHC20Q5W0Z9 365 aa10.58□□□□□ -0.72
PTCH1-225ENST00000551845 KCTD11Q693B1 232 aa10.58□□□□□ -0.72
PTCH1-225ENST00000551845 KDM7AQ6ZMT4 941 aa10.58□□□□□ -0.72
PTCH1-225ENST00000551845 MACC1Q6ZN28 852 aa10.58□□□□□ -0.72
PTCH1-225ENST00000551845 RFLNAQ6ZTI6 216 aa10.58□□□□□ -0.72
PTCH1-225ENST00000551845 RD3Q7Z3Z2 195 aa10.58□□□□□ -0.72
PTCH1-225ENST00000551845 GLT6D1Q7Z4J2 308 aa10.58□□□□□ -0.72
PTCH1-225ENST00000551845 PDZD3Q86UT5 571 aa10.58□□□□□ -0.72
PTCH1-225ENST00000551845 GATAD2AQ86YP4 633 aa10.58□□□□□ -0.72
PTCH1-225ENST00000551845 KLHDC8BQ8IXV7 354 aa10.58□□□□□ -0.72
PTCH1-225ENST00000551845 TAB3Q8N5C8 712 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-225ENST00000551845 OR56A4Q8NGH8 313 aa10.58□□□□□ -0.72
PTCH1-225ENST00000551845 BRSK1Q8TDC3 778 aa10.58□□□□□ -0.72
PTCH1-225ENST00000551845 FUBP1Q96AE4 644 aaKnown RBP10.58□□□□□ -0.72
PTCH1-225ENST00000551845 EID2BQ96D98 161 aa10.58□□□□□ -0.72
PTCH1-225ENST00000551845 TRIM44Q96DX7 344 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-225ENST00000551845 WDR92Q96MX6 357 aa10.58□□□□□ -0.72
PTCH1-225ENST00000551845 WDR24Q96S15 920 aa10.58□□□□□ -0.72
PTCH1-225ENST00000551845 APOL2Q9BQE5 337 aa10.58□□□□□ -0.72
PTCH1-225ENST00000551845 GORASP1Q9BQQ3 440 aa10.58□□□□□ -0.72
PTCH1-225ENST00000551845 TEX101Q9BY14 249 aa10.58□□□□□ -0.72
PTCH1-225ENST00000551845 SLC13A1Q9BZW2 595 aa10.58□□□□□ -0.72
PTCH1-225ENST00000551845 ARNT2Q9HBZ2 717 aa10.58□□□□□ -0.72
PTCH1-225ENST00000551845 RAB6BQ9NRW1 208 aa10.58□□□□□ -0.72
PTCH1-225ENST00000551845 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.58□□□□□ -0.72
PTCH1-225ENST00000551845 SPASTQ9UBP0 616 aa10.58□□□□□ -0.72
PTCH1-225ENST00000551845 MOSPD1Q9UJG1 213 aa10.58□□□□□ -0.72
PTCH1-225ENST00000551845 PKP3Q9Y446 797 aa10.58□□□□□ -0.72
PTCH1-225ENST00000551845 SPO11Q9Y5K1 396 aa10.58□□□□□ -0.72
PTCH1-225ENST00000551845 CEP295Q9C0D2 2601 aa10.58□□□□□ -0.72
PTCH1-225ENST00000551845 SPEGQ15772 3267 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms