RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 KRT74Q7RTS7 529 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 GSTA5Q7RTV2 222 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 SZRD1Q7Z422 152 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 THNSL1Q8IYQ7 743 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 LCORLQ8N3X6 602 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 METTL25Q8N6Q8 603 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 SIRT6Q8N6T7 355 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 AMER2Q8N7J2 671 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 FRMD1Q8N878 549 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 MRPL43Q8N983 215 aaKnown RBP3.94□□□□□ -1.78
LIMA1-208ENST00000551691 ADPRHL1Q8NDY3 354 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 TOR1AIP2Q8NFQ8 470 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 CNOT9Q92600 299 aaKnown RBP3.94□□□□□ -1.78
LIMA1-208ENST00000551691 NPIPB3Q92617 1050 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 CASP10Q92851 521 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 TCEAL3Q969E4 200 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 ZG16BQ96DA0 208 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 MYADMQ96S97 322 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 MNTQ99583 582 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 ITPAQ9BY32 194 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 TXLNGYQ9BZA5 131 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 USP29Q9HBJ7 922 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 GALNT9Q9HCQ5 603 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 THAP1Q9NVV9 213 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 MPP6Q9NZW5 540 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 RAB23Q9ULC3 237 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 KCNE2Q9Y6J6 123 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 SPTA1P02549 2419 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 ITPR3Q14573 2671 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 FANCIQ9NVI1 1328 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 TTC3P53804 2025 aa3.94□□□□□ -1.78
LIMA1-208ENST00000551691 LOC105369274A0A096LPK9 316 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 LOC102723532A0A0G2JNH3 316 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 GOLGA6L10A0A0M3HER8 536 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 KANSL1LA0AUZ9 987 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 GXYLT2A0PJZ3 443 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 C17orf102A2RUQ5 167 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 C4orf47A7E2U8 309 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 TTC34A8MYJ7 566 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 J3QKU1 62 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 DHHO43323 396 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 BEST1O76090 585 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 NXPH3O95157 252 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 METTL18O95568 372 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 GH1P01241 217 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 FESP07332 822 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 PDHA1P08559 390 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 CYP21A2P08686 494 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 SMIM10L2AP0DMW4 78 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 SMIM10L2BP0DMW5 78 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 PEPDP12955 493 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 TDGF1P13385 188 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 CYP4B1P13584 511 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 KRT10P13645 584 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 COX7A2P14406 83 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 PPP3CBP16298 524 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 KRT4P19013 534 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 MAKP20794 623 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 MATN1P21941 496 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 GSTM2P28161 218 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 CD52P31358 61 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 SLC8A1P32418 973 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 CLCN2P51788 898 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 RPS6KA3P51812 740 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 OAZ1P54368 228 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 FAM3BP58499 235 aaPredicted RBP3.93□□□□□ -1.78
LIMA1-208ENST00000551691 UFM1P61960 85 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 PRAMEP78395 509 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 PLIN5Q00G26 463 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 EPS8Q12929 822 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 STK4Q13043 487 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 BECN1Q14457 450 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 MED22Q15528 200 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 PDCD4Q53EL6 469 aaKnown RBP3.93□□□□□ -1.78
LIMA1-208ENST00000551691 C12orf60Q5U649 245 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 ARMC6Q6NXE6 501 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 TMEM88Q6PEY1 159 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 Q6ZRM9 215 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 LRRC55Q6ZSA7 311 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 KDELC2Q7Z4H8 507 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 MRGPRGQ86SM5 289 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 VSIG1Q86XK7 387 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 OR4N4Q8N0Y3 316 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 GHDCQ8N2G8 530 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 ZNF843Q8N446 348 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 GALNT4Q8N4A0 578 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 COLGALT1Q8NBJ5 622 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 LSM14AQ8ND56 463 aaKnown RBP3.93□□□□□ -1.78
LIMA1-208ENST00000551691 OR52L2PQ8NGH6 319 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 NCSTNQ92542 709 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 MRPS27Q92552 414 aaKnown RBP3.93□□□□□ -1.78
LIMA1-208ENST00000551691 FKBP10Q96AY3 582 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 LENG8Q96PV6 779 aaPredicted RBP3.93□□□□□ -1.78
LIMA1-208ENST00000551691 NEU1Q99519 415 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 NCAPGQ9BPX3 1015 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 CTDSP1Q9GZU7 261 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 MUC13Q9H3R2 512 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 CWH43Q9H720 699 aa3.93□□□□□ -1.78
LIMA1-208ENST00000551691 TTC12Q9H892 705 aaPredicted RBP3.93□□□□□ -1.78
LIMA1-208ENST00000551691 BRF2Q9HAW0 419 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms