RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 CES5AQ6NT32 575 aa5.5□□□□□ -1.53
CPSF6-206ENST00000550987 SPRED1Q7Z699 444 aa5.5□□□□□ -1.53
CPSF6-206ENST00000550987 TBC1D26Q86UD7 250 aa5.5□□□□□ -1.53
CPSF6-206ENST00000550987 ARL14EPQ8N8R7 260 aaPredicted RBP5.5□□□□□ -1.53
CPSF6-206ENST00000550987 GPATCH11Q8N954 259 aa5.5□□□□□ -1.53
CPSF6-206ENST00000550987 AVL9Q8NBF6 648 aa5.5□□□□□ -1.53
CPSF6-206ENST00000550987 NEU4Q8WWR8 484 aaPredicted RBP5.5□□□□□ -1.53
CPSF6-206ENST00000550987 MMABQ96EY8 250 aaPredicted RBP5.5□□□□□ -1.53
CPSF6-206ENST00000550987 ZC3HAV1LQ96H79 300 aaKnown RBP5.5□□□□□ -1.53
CPSF6-206ENST00000550987 PGAM5Q96HS1 289 aa5.5□□□□□ -1.53
CPSF6-206ENST00000550987 C1orf74Q96LT6 269 aa5.5□□□□□ -1.53
CPSF6-206ENST00000550987 SIN3AQ96ST3 1273 aa5.5□□□□□ -1.53
CPSF6-206ENST00000550987 ZNF304Q9HCX3 659 aa5.5□□□□□ -1.53
CPSF6-206ENST00000550987 SLC35C2Q9NQQ7 365 aa5.5□□□□□ -1.53
CPSF6-206ENST00000550987 ASAH2Q9NR71 780 aa5.5□□□□□ -1.53
CPSF6-206ENST00000550987 SLC6A13Q9NSD5 602 aa5.5□□□□□ -1.53
CPSF6-206ENST00000550987 SPATS2LQ9NUQ6 558 aaKnown RBP5.5□□□□□ -1.53
CPSF6-206ENST00000550987 CPSF2Q9P2I0 782 aaKnown RBP5.5□□□□□ -1.53
CPSF6-206ENST00000550987 GIMAP2Q9UG22 337 aa5.5□□□□□ -1.53
CPSF6-206ENST00000550987 NENFQ9UMX5 172 aa5.5□□□□□ -1.53
CPSF6-206ENST00000550987 UTYO14607 1347 aa5.49□□□□□ -1.53
CPSF6-206ENST00000550987 RPGRIP1LQ68CZ1 1315 aa5.49□□□□□ -1.53
CPSF6-206ENST00000550987 H7C0S8 307 aa5.49□□□□□ -1.53
CPSF6-206ENST00000550987 SH2B2O14492 632 aaPredicted RBP5.49□□□□□ -1.53
CPSF6-206ENST00000550987 NDUFS3O75489 264 aa5.49□□□□□ -1.53
CPSF6-206ENST00000550987 TMCC1O94876 653 aa5.49□□□□□ -1.53
CPSF6-206ENST00000550987 LCKP06239 509 aa5.49□□□□□ -1.53
CPSF6-206ENST00000550987 PRR35P0CG20 571 aa5.49□□□□□ -1.53
CPSF6-206ENST00000550987 IL11P20809 199 aa5.49□□□□□ -1.53
CPSF6-206ENST00000550987 PTGER1P34995 402 aa5.49□□□□□ -1.53
CPSF6-206ENST00000550987 UBA7P41226 1012 aa5.49□□□□□ -1.53
CPSF6-206ENST00000550987 CLCNKBP51801 687 aa5.49□□□□□ -1.53
CPSF6-206ENST00000550987 EFNA5P52803 228 aa5.49□□□□□ -1.53
CPSF6-206ENST00000550987 SLC12A2P55011 1212 aa5.49□□□□□ -1.53
CPSF6-206ENST00000550987 F2RL1P55085 397 aa5.49□□□□□ -1.53
CPSF6-206ENST00000550987 YPEL5P62699 121 aa5.49□□□□□ -1.53
CPSF6-206ENST00000550987 AIMP1Q12904 312 aaKnown RBP5.49□□□□□ -1.53
CPSF6-206ENST00000550987 OLIG2Q13516 323 aa5.49□□□□□ -1.53
CPSF6-206ENST00000550987 SPATS1Q496A3 300 aa5.49□□□□□ -1.53
CPSF6-206ENST00000550987 TXNDC8Q6A555 127 aa5.49□□□□□ -1.53
CPSF6-206ENST00000550987 SUMO4Q6EEV6 95 aa5.49□□□□□ -1.53
CPSF6-206ENST00000550987 AAGABQ6PD74 315 aa5.49□□□□□ -1.53
CPSF6-206ENST00000550987 ARHGEF25Q86VW2 580 aa5.49□□□□□ -1.53
CPSF6-206ENST00000550987 CHSY1Q86X52 802 aa5.49□□□□□ -1.53
CPSF6-206ENST00000550987 DPP10Q8N608 796 aa5.49□□□□□ -1.53
CPSF6-206ENST00000550987 APPL2Q8NEU8 664 aa5.49□□□□□ -1.53
CPSF6-206ENST00000550987 REPS1Q96D71 796 aa5.49□□□□□ -1.53
CPSF6-206ENST00000550987 ZNF419Q96HQ0 510 aaPredicted RBP5.49□□□□□ -1.53
CPSF6-206ENST00000550987 SPATA17Q96L03 361 aa5.49□□□□□ -1.53
CPSF6-206ENST00000550987 UROC1Q96N76 676 aa5.49□□□□□ -1.53
CPSF6-206ENST00000550987 DUSP26Q9BV47 211 aa5.49□□□□□ -1.53
CPSF6-206ENST00000550987 GATA5Q9BWX5 397 aaPredicted RBP5.49□□□□□ -1.53
CPSF6-206ENST00000550987 FRMD8Q9BZ67 464 aaPredicted RBP5.49□□□□□ -1.53
CPSF6-206ENST00000550987 ACTR5Q9H9F9 607 aaPredicted RBP5.49□□□□□ -1.53
CPSF6-206ENST00000550987 CCDC177Q9NQR7 707 aaPredicted RBP5.49□□□□□ -1.53
CPSF6-206ENST00000550987 TAB2Q9NYJ8 693 aa5.49□□□□□ -1.53
CPSF6-206ENST00000550987 CNOT8Q9UFF9 292 aaKnown RBP5.49□□□□□ -1.53
CPSF6-206ENST00000550987 CARD8Q9Y2G2 431 aa5.49□□□□□ -1.53
CPSF6-206ENST00000550987 ZNF711Q9Y462 761 aa5.49□□□□□ -1.53
CPSF6-206ENST00000550987 WNT6Q9Y6F9 365 aa5.49□□□□□ -1.53
CPSF6-206ENST00000550987 ITPR1Q14643 2758 aa5.49□□□□□ -1.53
CPSF6-206ENST00000550987 CHD9Q3L8U1 2897 aa5.49□□□□□ -1.53
CPSF6-206ENST00000550987 ADGRF5Q8IZF2 1346 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 NOTCH2Q04721 2471 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 MAST2Q6P0Q8 1798 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 A0A0A0MQY5 61 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 FAM170AA1A519 330 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 TMEM191CA6NGB0 347 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 DDTLA6NHG4 134 aaPredicted RBP5.48□□□□□ -1.53
CPSF6-206ENST00000550987 ENO4A6NNW6 628 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 NKX2-2O95096 273 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 OR2C1O95371 312 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 PGM3O95394 542 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 MT-CYBP00156 380 aaPredicted RBP5.48□□□□□ -1.53
CPSF6-206ENST00000550987 IL7RP16871 459 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 HOXA7P31268 230 aaPredicted RBP5.48□□□□□ -1.53
CPSF6-206ENST00000550987 CDAP32320 146 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 MCM7P33993 719 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 RFC1P35251 1148 aaPredicted RBP5.48□□□□□ -1.53
CPSF6-206ENST00000550987 NRIP1P48552 1158 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 GALCP54803 685 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 MFAP4P55083 255 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 FKBP1BP68106 108 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 UBXN2AP68543 259 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 ITGADQ13349 1161 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 FGFBP1Q14512 234 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 DRAP1Q14919 205 aaPredicted RBP5.48□□□□□ -1.53
CPSF6-206ENST00000550987 NAB2Q15742 525 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 KRTAP21-3Q3LHN1 58 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 ALG10Q5BKT4 473 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 ALG10BQ5I7T1 473 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 PRAMEF17Q5VTA0 474 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 HMBOX1Q6NT76 420 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 RPUSD3Q6P087 351 aaKnown RBP5.48□□□□□ -1.53
CPSF6-206ENST00000550987 MOB2Q70IA6 237 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 VSIG1Q86XK7 387 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 DHX40Q8IX18 779 aaKnown RBP5.48□□□□□ -1.53
CPSF6-206ENST00000550987 SCML4Q8N228 414 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 POMGNT2Q8NAT1 580 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 HDAC7Q8WUI4 952 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms