RNA–Protein interactions for RNA: ENST00000550889.5

ATXN2-222, Transcript of ataxin 2, human

TSL 2

Gene ATXN2, Length 1,703 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN2-222	ENST00000550889	MIF4GD	A9UHW6	222 aa	Known RBP	4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	C10orf142	B7Z368	130 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889		K7ERQ8	282 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	SMAD6	O43541	496 aa	Known RBP	4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	BUB1	O43683	1085 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	MAFK	O60675	156 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	PRAMEF11	O60813	436 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	SEMA7A	O75326	666 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	LMNA	P02545	664 aa	Known RBP	4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	DNTT	P04053	509 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	DBH	P09172	617 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	CD48	P09326	243 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	ZFX	P17010	805 aa	Predicted RBP	4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	C5AR1	P21730	350 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	GLDC	P23378	1020 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	CTNNA1	P35221	906 aa	Known RBP	4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	RECQL	P46063	649 aa	Predicted RBP	4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	PXN	P49023	591 aa	Predicted RBP	4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	NR2C2	P49116	596 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	PAPOLA	P51003	745 aa	Known RBP	4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	TPMT	P51580	245 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	RPS14	P62263	151 aa	Known RBP	4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	NSUN2	Q08J23	767 aa	Known RBP eCLIP	4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	CCDC15	Q0P6D6	951 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	GALNT2	Q10471	571 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	SIM2	Q14190	667 aa	Predicted RBP	4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	ZKSCAN8	Q15776	578 aa	Predicted RBP	4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	CST6	Q15828	149 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	TTC31	Q49AM3	519 aa	Predicted RBP	4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	ACCSL	Q4AC99	568 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	TFDP3	Q5H9I0	405 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	FAM46C	Q5VWP2	391 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	ZNF776	Q68DI1	518 aa	Predicted RBP	4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	SLC9A4	Q6AI14	798 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	C22orf39	Q6P5X5	142 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	LINGO4	Q6UY18	593 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	SLC36A4	Q6YBV0	504 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	KBTBD6	Q86V97	674 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	RCOR2	Q8IZ40	523 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	NPW	Q8N729	165 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	PQLC3	Q8N755	202 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	ZNF366	Q8N895	744 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	SUMF1	Q8NBK3	374 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	TMIE	Q8NEW7	156 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	CADM4	Q8NFZ8	388 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	OR8D1	Q8WZ84	308 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	NKD2	Q969F2	451 aa	Predicted RBP	4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	TSGA13	Q96PP4	275 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	PSKH2	Q96QS6	385 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	DESI2	Q9BSY9	194 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	SLC39A8	Q9C0K1	460 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	BRD8	Q9H0E9	1235 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	ETNK2	Q9NVF9	386 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	IPO11	Q9UI26	975 aa	Known RBP	4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	FZD4	Q9ULV1	537 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	TFR2	Q9UP52	801 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	MFHAS1	Q9Y4C4	1052 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889		R4GN57	208 aa		4.74	□□□□□ -1.65
ATXN2-222	ENST00000550889	MYOF	Q9NZM1	2061 aa		4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	IGHV1OR15-9	A0A0B4J2B8	117 aa		4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	MACROD2	A1Z1Q3	448 aa		4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	LRRD1	A4D1F6	860 aa		4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	C1QTNF3-AMACR	E9PGA6	284 aa		4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889		J3KR12	359 aa		4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	SLC7A4	O43246	635 aa		4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	PALM	O75781	387 aa		4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	RHOBTB1	O94844	696 aa		4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	TMCC1	O94876	653 aa		4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	POP4	O95707	220 aa	Known RBP	4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	PEX11B	O96011	259 aa		4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	GSR	P00390	522 aa		4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	CP	P00450	1065 aa		4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	IL1B	P01584	269 aa		4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	FUCA1	P04066	466 aa		4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	KRT1	P04264	644 aa		4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	ACADM	P11310	421 aa		4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	CCNC	P24863	283 aa		4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	CTNNA2	P26232	953 aa		4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	CD6	P30203	668 aa		4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	CHRNA3	P32297	505 aa		4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	SLC8A1	P32418	973 aa		4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	PTPN7	P35236	360 aa		4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	HOXD12	P35452	270 aa		4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	HSPA9	P38646	679 aa	Known RBP	4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	GARS	P41250	739 aa	Known RBP	4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	DPP6	P42658	865 aa		4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	CDKN2B	P42772	138 aa		4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	CSNK1D	P48730	415 aa		4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	PEX5	P50542	639 aa		4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	RENBP	P51606	427 aa		4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	NAP1L1	P55209	391 aa	Known RBP	4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	GFRA1	P56159	465 aa		4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	SNRPD1	P62314	119 aa	Known RBP	4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	YBX1	P67809	324 aa	Known RBP	4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	HNRNPD	Q14103	355 aa	Known RBP	4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	TFDP2	Q14188	446 aa		4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	GRM3	Q14832	879 aa		4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	ELF2	Q15723	593 aa		4.73	□□□□□ -1.65
ATXN2-222	ENST00000550889	PLEKHN1	Q494U1	663 aa	Predicted RBP	4.73	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms