RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 PNCKQ6P2M8 343 aa13□□□□□ -0.33
RAB5C-206ENST00000550406 ZDHHC24Q6UX98 284 aa13□□□□□ -0.33
RAB5C-206ENST00000550406 ART4Q93070 314 aa13□□□□□ -0.33
RAB5C-206ENST00000550406 AP2M1Q96CW1 435 aa13□□□□□ -0.33
RAB5C-206ENST00000550406 DNAJC1Q96KC8 554 aaKnown RBP13□□□□□ -0.33
RAB5C-206ENST00000550406 RIOK2Q9BVS4 552 aaKnown RBP13□□□□□ -0.33
RAB5C-206ENST00000550406 CAAP1Q9H8G2 361 aa13□□□□□ -0.33
RAB5C-206ENST00000550406 CHRAC1Q9NRG0 131 aa13□□□□□ -0.33
RAB5C-206ENST00000550406 GPR27Q9NS67 375 aa13□□□□□ -0.33
RAB5C-206ENST00000550406 NFKBIL1Q9UBC1 381 aaPredicted RBP13□□□□□ -0.33
RAB5C-206ENST00000550406 SLC2A6Q9UGQ3 507 aa13□□□□□ -0.33
RAB5C-206ENST00000550406 ANAPC5Q9UJX4 755 aa13□□□□□ -0.33
RAB5C-206ENST00000550406 TMPRSS11EQ9UL52 423 aa13□□□□□ -0.33
RAB5C-206ENST00000550406 RAB23Q9ULC3 237 aa13□□□□□ -0.33
RAB5C-206ENST00000550406 CNOT6Q9ULM6 557 aaKnown RBP13□□□□□ -0.33
RAB5C-206ENST00000550406 UTP11Q9Y3A2 253 aaKnown RBP13□□□□□ -0.33
RAB5C-206ENST00000550406 TCAF1Q9Y4C2 921 aa13□□□□□ -0.33
RAB5C-206ENST00000550406 MYO15AQ9UKN7 3530 aa13□□□□□ -0.33
RAB5C-206ENST00000550406 CACNA1EQ15878 2313 aa12.99□□□□□ -0.33
RAB5C-206ENST00000550406 A0A1B0GTW7 788 aa12.99□□□□□ -0.33
RAB5C-206ENST00000550406 CCDC78A2IDD5 438 aa12.99□□□□□ -0.33
RAB5C-206ENST00000550406 FADS2P1A8MWK0 482 aa12.99□□□□□ -0.33
RAB5C-206ENST00000550406 FPGTO14772 594 aa12.99□□□□□ -0.33
RAB5C-206ENST00000550406 STX7O15400 261 aaKnown RBP12.99□□□□□ -0.33
RAB5C-206ENST00000550406 CRTAMO95727 393 aa12.99□□□□□ -0.33
RAB5C-206ENST00000550406 LMNAP02545 664 aaKnown RBP12.99□□□□□ -0.33
RAB5C-206ENST00000550406 PCCBP05166 539 aa12.99□□□□□ -0.33
RAB5C-206ENST00000550406 TGM1P22735 817 aa12.99□□□□□ -0.33
RAB5C-206ENST00000550406 TRIM23P36406 574 aa12.99□□□□□ -0.33
RAB5C-206ENST00000550406 MPLP40238 635 aa12.99□□□□□ -0.33
RAB5C-206ENST00000550406 ARSDP51689 593 aa12.99□□□□□ -0.33
RAB5C-206ENST00000550406 PFN3P60673 137 aa12.99□□□□□ -0.33
RAB5C-206ENST00000550406 SARNPP82979 210 aaKnown RBP12.99□□□□□ -0.33
RAB5C-206ENST00000550406 TMPRSS15P98073 1019 aa12.99□□□□□ -0.33
RAB5C-206ENST00000550406 XIAPP98170 497 aa12.99□□□□□ -0.33
RAB5C-206ENST00000550406 CBLBQ13191 982 aa12.99□□□□□ -0.33
RAB5C-206ENST00000550406 SEPT6Q14141 434 aa12.99□□□□□ -0.33
RAB5C-206ENST00000550406 STAT4Q14765 748 aa12.99□□□□□ -0.33
RAB5C-206ENST00000550406 GLE1Q53GS7 698 aaKnown RBP12.99□□□□□ -0.33
RAB5C-206ENST00000550406 PCID2Q5JVF3 399 aa12.99□□□□□ -0.33
RAB5C-206ENST00000550406 TSTD2Q5T7W7 516 aa12.99□□□□□ -0.33
RAB5C-206ENST00000550406 ALS2CLQ60I27 953 aa12.99□□□□□ -0.33
RAB5C-206ENST00000550406 IGDCC3Q8IVU1 814 aa12.99□□□□□ -0.33
RAB5C-206ENST00000550406 SLC22A18ASQ8N1D0 253 aa12.99□□□□□ -0.33
RAB5C-206ENST00000550406 MFSD2AQ8NA29 543 aa12.99□□□□□ -0.33
RAB5C-206ENST00000550406 OR13H1Q8NG92 308 aa12.99□□□□□ -0.33
RAB5C-206ENST00000550406 OR13J1Q8NGT2 312 aa12.99□□□□□ -0.33
RAB5C-206ENST00000550406 WDR83Q9BRX9 315 aaKnown RBP12.99□□□□□ -0.33
RAB5C-206ENST00000550406 TRIM56Q9BRZ2 755 aaKnown RBP12.99□□□□□ -0.33
RAB5C-206ENST00000550406 APOOQ9BUR5 198 aa12.99□□□□□ -0.33
RAB5C-206ENST00000550406 KIFC1Q9BW19 673 aa12.99□□□□□ -0.33
RAB5C-206ENST00000550406 RAB17Q9H0T7 212 aa12.99□□□□□ -0.33
RAB5C-206ENST00000550406 FAM83DQ9H4H8 585 aa12.99□□□□□ -0.33
RAB5C-206ENST00000550406 XAB2Q9HCS7 855 aaKnown RBP12.99□□□□□ -0.33
RAB5C-206ENST00000550406 IL26Q9NPH9 171 aa12.99□□□□□ -0.33
RAB5C-206ENST00000550406 FSCN3Q9NQT6 498 aa12.99□□□□□ -0.33
RAB5C-206ENST00000550406 AASDHPPTQ9NRN7 309 aa12.99□□□□□ -0.33
RAB5C-206ENST00000550406 NLE1Q9NVX2 485 aaPredicted RBP12.99□□□□□ -0.33
RAB5C-206ENST00000550406 KCTD5Q9NXV2 234 aa12.99□□□□□ -0.33
RAB5C-206ENST00000550406 BFARQ9NZS9 450 aa12.99□□□□□ -0.33
RAB5C-206ENST00000550406 FKBPLQ9UIM3 349 aa12.99□□□□□ -0.33
RAB5C-206ENST00000550406 RIMKLBQ9ULI2 386 aa12.99□□□□□ -0.33
RAB5C-206ENST00000550406 PCDHGA5Q9Y5G8 931 aa12.99□□□□□ -0.33
RAB5C-206ENST00000550406 A0A1B0GVT2 93 aa12.98□□□□□ -0.33
RAB5C-206ENST00000550406 HEATR9A2RTY3 570 aa12.98□□□□□ -0.33
RAB5C-206ENST00000550406 C2orf81A6NN90 581 aa12.98□□□□□ -0.33
RAB5C-206ENST00000550406 GPR39O43194 453 aa12.98□□□□□ -0.33
RAB5C-206ENST00000550406 RETP07949 1114 aa12.98□□□□□ -0.33
RAB5C-206ENST00000550406 NMBRP28336 390 aa12.98□□□□□ -0.33
RAB5C-206ENST00000550406 HOXD12P35452 270 aa12.98□□□□□ -0.33
RAB5C-206ENST00000550406 DCDC1P59894 354 aa12.98□□□□□ -0.33
RAB5C-206ENST00000550406 GUCY2DQ02846 1103 aa12.98□□□□□ -0.33
RAB5C-206ENST00000550406 ACVR1Q04771 509 aa12.98□□□□□ -0.33
RAB5C-206ENST00000550406 DHX9Q08211 1270 aaKnown RBP12.98□□□□□ -0.33
RAB5C-206ENST00000550406 PEX6Q13608 980 aa12.98□□□□□ -0.33
RAB5C-206ENST00000550406 CHRNA6Q15825 494 aa12.98□□□□□ -0.33
RAB5C-206ENST00000550406 DUOXA1Q1HG43 343 aa12.98□□□□□ -0.33
RAB5C-206ENST00000550406 SLC23A3Q6PIS1 610 aa12.98□□□□□ -0.33
RAB5C-206ENST00000550406 CES3Q6UWW8 571 aa12.98□□□□□ -0.33
RAB5C-206ENST00000550406 KYAT3Q6YP21 454 aaKnown RBP12.98□□□□□ -0.33
RAB5C-206ENST00000550406 Q6ZSR6 202 aa12.98□□□□□ -0.33
RAB5C-206ENST00000550406 ASCL5Q7RTU5 278 aa12.98□□□□□ -0.33
RAB5C-206ENST00000550406 SPATS2Q86XZ4 545 aaKnown RBP12.98□□□□□ -0.33
RAB5C-206ENST00000550406 DCLK2Q8N568 766 aa12.98□□□□□ -0.33
RAB5C-206ENST00000550406 BBOF1Q8ND07 529 aa12.98□□□□□ -0.33
RAB5C-206ENST00000550406 STYXQ8WUJ0 223 aa12.98□□□□□ -0.33
RAB5C-206ENST00000550406 CDKN2AIPNLQ96HQ2 116 aa12.98□□□□□ -0.33
RAB5C-206ENST00000550406 FCRL3Q96P31 734 aaPredicted RBP12.98□□□□□ -0.33
RAB5C-206ENST00000550406 PLEKHG4BQ96PX9 1271 aa12.98□□□□□ -0.33
RAB5C-206ENST00000550406 C19orf43Q9BQ61 176 aa12.98□□□□□ -0.33
RAB5C-206ENST00000550406 LGR4Q9BXB1 951 aa12.98□□□□□ -0.33
RAB5C-206ENST00000550406 C1QTNF7Q9BXJ2 289 aa12.98□□□□□ -0.33
RAB5C-206ENST00000550406 IL22Q9GZX6 179 aa12.98□□□□□ -0.33
RAB5C-206ENST00000550406 SUDS3Q9H7L9 328 aaPredicted RBP12.98□□□□□ -0.33
RAB5C-206ENST00000550406 CAPN10Q9HC96 672 aa12.98□□□□□ -0.33
RAB5C-206ENST00000550406 EPB41L5Q9HCM4 733 aa12.98□□□□□ -0.33
RAB5C-206ENST00000550406 TREX1Q9NSU2 369 aa12.98□□□□□ -0.33
RAB5C-206ENST00000550406 ZDHHC18Q9NUE0 388 aa12.98□□□□□ -0.33
RAB5C-206ENST00000550406 PNMA8BQ9ULN7 279 aaPredicted RBP12.98□□□□□ -0.33
RAB5C-206ENST00000550406 SOX13Q9UN79 622 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms