RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 HOXA13P31271 388 aaPredicted RBP6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 CIITAP33076 1130 aa6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 RBP5P82980 135 aa6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 SLC25A3Q00325 362 aa6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 OLIG2Q13516 323 aa6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 ASIC2Q16515 512 aa6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 EDRF1Q3B7T1 1238 aa6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 GLE1Q53GS7 698 aaKnown RBP6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 ZNF628Q5EBL2 1059 aa6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 C9orf152Q5JTZ5 239 aa6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 HMBOX1Q6NT76 420 aa6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 ANKRD16Q6P6B7 361 aa6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 DCLRE1AQ6PJP8 1040 aa6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 FAM43BQ6ZT52 329 aaPredicted RBP6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 ATG9AQ7Z3C6 839 aa6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 BCDIN3DQ7Z5W3 292 aaKnown RBP6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 GPAT4Q86UL3 456 aa6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 AMER2Q8N7J2 671 aa6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 ZBTB8BQ8NAP8 495 aaPredicted RBP6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 FEZF2Q8TBJ5 459 aa6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 HS6ST2Q96MM7 605 aa6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 ADOQ96SZ5 270 aa6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 NCAPGQ9BPX3 1015 aa6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 AIFM2Q9BRQ8 373 aa6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 PLEKHA4Q9H4M7 779 aa6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 PDZD7Q9H5P4 517 aa6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 DDX4Q9NQI0 724 aaKnown RBP6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 SLC6A13Q9NSD5 602 aa6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 AURKAIP1Q9NWT8 199 aaPredicted RBP6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 CNOT8Q9UFF9 292 aaKnown RBP6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 TESQ9UGI8 421 aaKnown RBP6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 DHDHQ9UQ10 334 aa6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 HEMK1Q9Y5R4 338 aaPredicted RBP6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 TRPV2Q9Y5S1 764 aa6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 ZHX2Q9Y6X8 837 aa6.33□□□□□ -1.4
TGFBR1-208ENST00000550253 MAST2Q6P0Q8 1798 aa6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 A0A1W2PPC1 479 aa6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 USP17L23D6RBM5 183 aa6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 HOXD10P28358 340 aa6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 CDAP32320 146 aa6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 GABRB2P47870 512 aa6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 F2RL1P55085 397 aa6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 BFSP1Q12934 665 aa6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 BAATQ14032 418 aaPredicted RBP6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 FGFBP1Q14512 234 aa6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 ADIPOQQ15848 244 aa6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 CAVIN4Q5BKX8 364 aa6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 ARL13AQ5H913 290 aaPredicted RBP6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 FAM171A1Q5VUB5 890 aa6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 LAIR1Q6GTX8 287 aa6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 PLBD1Q6P4A8 553 aa6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 ZNF474Q6S9Z5 364 aaPredicted RBP6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 GSTA5Q7RTV2 222 aa6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 IQCA1Q86XH1 822 aa6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 RFX6Q8HWS3 928 aa6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 THNSL1Q8IYQ7 743 aa6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 SCYL3Q8IZE3 742 aa6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 ANKRD13CQ8N6S4 541 aa6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 SH3RF3Q8TEJ3 882 aaPredicted RBP6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 DUSP19Q8WTR2 217 aa6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 Q96MF0 132 aa6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 PARK7Q99497 189 aaKnown RBP6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 TUBB6Q9BUF5 446 aa6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 MRPL9Q9BYD2 267 aaKnown RBP6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 FRMD8Q9BZ67 464 aaPredicted RBP6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 TRIM2Q9C040 744 aa6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 CXorf56Q9H5V9 222 aa6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 CD248Q9HCU0 757 aa6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 ASIC5Q9NY37 505 aa6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 PLK2Q9NYY3 685 aa6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 TMOD2Q9NZR1 351 aa6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 LTBP2Q14767 1821 aa6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 MAST3O60307 1309 aa6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 KIF16BQ96L93 1317 aa6.32□□□□□ -1.4
TGFBR1-208ENST00000550253 FOCADQ5VW36 1801 aa6.31□□□□□ -1.4
TGFBR1-208ENST00000550253 CENPVL1A0A0U1RR11 272 aa6.31□□□□□ -1.4
TGFBR1-208ENST00000550253 CBY3A6NI87 242 aa6.31□□□□□ -1.4
TGFBR1-208ENST00000550253 CXCL11O14625 94 aa6.31□□□□□ -1.4
TGFBR1-208ENST00000550253 ADAMDEC1O15204 470 aa6.31□□□□□ -1.4
TGFBR1-208ENST00000550253 PAPSS1O43252 624 aaPredicted RBP6.31□□□□□ -1.4
TGFBR1-208ENST00000550253 PSMD10O75832 226 aa6.31□□□□□ -1.4
TGFBR1-208ENST00000550253 GGPS1O95749 300 aa6.31□□□□□ -1.4
TGFBR1-208ENST00000550253 MT-CO3P00414 261 aa6.31□□□□□ -1.4
TGFBR1-208ENST00000550253 PTMAP06454 111 aaKnown RBP6.31□□□□□ -1.4
TGFBR1-208ENST00000550253 IRF1P10914 325 aa6.31□□□□□ -1.4
TGFBR1-208ENST00000550253 HOXC13P31276 330 aa6.31□□□□□ -1.4
TGFBR1-208ENST00000550253 IDUAP35475 653 aa6.31□□□□□ -1.4
TGFBR1-208ENST00000550253 STAT2P52630 851 aa6.31□□□□□ -1.4
TGFBR1-208ENST00000550253 EEFSECP57772 596 aaKnown RBP6.31□□□□□ -1.4
TGFBR1-208ENST00000550253 ICAM4Q14773 271 aa6.31□□□□□ -1.4
TGFBR1-208ENST00000550253 HS1BP3Q53T59 392 aa6.31□□□□□ -1.4
TGFBR1-208ENST00000550253 TMEM63BQ5T3F8 832 aa6.31□□□□□ -1.4
TGFBR1-208ENST00000550253 VWA5B1Q5TIE3 1220 aa6.31□□□□□ -1.4
TGFBR1-208ENST00000550253 WDR63Q8IWG1 891 aa6.31□□□□□ -1.4
TGFBR1-208ENST00000550253 DEFB123Q8N688 67 aa6.31□□□□□ -1.4
TGFBR1-208ENST00000550253 GDPD5Q8WTR4 605 aa6.31□□□□□ -1.4
TGFBR1-208ENST00000550253 RMDN1Q96DB5 314 aa6.31□□□□□ -1.4
TGFBR1-208ENST00000550253 PABPC5Q96DU9 382 aaKnown RBP6.31□□□□□ -1.4
TGFBR1-208ENST00000550253 XYLT2Q9H1B5 865 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms