RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 LBRQ14739 615 aaKnown RBP13.43□□□□□ -0.26
NUP188-211ENST00000550219 ACOX1Q15067 660 aa13.43□□□□□ -0.26
NUP188-211ENST00000550219 LLGL1Q15334 1064 aa13.43□□□□□ -0.26
NUP188-211ENST00000550219 TAF1BQ53T94 588 aaPredicted RBP13.43□□□□□ -0.26
NUP188-211ENST00000550219 TMCO4Q5TGY1 634 aa13.43□□□□□ -0.26
NUP188-211ENST00000550219 KAZNQ674X7 775 aa13.43□□□□□ -0.26
NUP188-211ENST00000550219 DENND2CQ68D51 928 aa13.43□□□□□ -0.26
NUP188-211ENST00000550219 TMCO3Q6UWJ1 677 aa13.43□□□□□ -0.26
NUP188-211ENST00000550219 B3GNT8Q7Z7M8 397 aa13.43□□□□□ -0.26
NUP188-211ENST00000550219 RFX6Q8HWS3 928 aa13.43□□□□□ -0.26
NUP188-211ENST00000550219 WDR36Q8NI36 951 aaKnown RBP13.43□□□□□ -0.26
NUP188-211ENST00000550219 WDR48Q8TAF3 677 aa13.43□□□□□ -0.26
NUP188-211ENST00000550219 OR1E3Q8WZA6 343 aa13.43□□□□□ -0.26
NUP188-211ENST00000550219 GFM1Q96RP9 751 aaKnown RBP13.43□□□□□ -0.26
NUP188-211ENST00000550219 FOXP3Q9BZS1 431 aa13.43□□□□□ -0.26
NUP188-211ENST00000550219 FGF22Q9HCT0 170 aa13.43□□□□□ -0.26
NUP188-211ENST00000550219 MRPL40Q9NQ50 206 aaKnown RBP13.43□□□□□ -0.26
NUP188-211ENST00000550219 RNF14Q9UBS8 474 aa13.43□□□□□ -0.26
NUP188-211ENST00000550219 SEPT3Q9UH03 358 aa13.43□□□□□ -0.26
NUP188-211ENST00000550219 IGSF10Q6WRI0 2623 aa13.43□□□□□ -0.26
NUP188-211ENST00000550219 CCDC187A0A096LP49 1063 aa13.42□□□□□ -0.26
NUP188-211ENST00000550219 TCRBV7S2A1N4TA0A589 114 aa13.42□□□□□ -0.26
NUP188-211ENST00000550219 TMEM202A6NGA9 273 aa13.42□□□□□ -0.26
NUP188-211ENST00000550219 D6RAR5 112 aa13.42□□□□□ -0.26
NUP188-211ENST00000550219 APOC4-APOC2K7ER74 178 aa13.42□□□□□ -0.26
NUP188-211ENST00000550219 APOC2P02655 101 aa13.42□□□□□ -0.26
NUP188-211ENST00000550219 FGGP02679 453 aa13.42□□□□□ -0.26
NUP188-211ENST00000550219 SERPINB6P35237 376 aa13.42□□□□□ -0.26
NUP188-211ENST00000550219 CSNK1DP48730 415 aa13.42□□□□□ -0.26
NUP188-211ENST00000550219 NR2C2P49116 596 aa13.42□□□□□ -0.26
NUP188-211ENST00000550219 UCNP55089 124 aa13.42□□□□□ -0.26
NUP188-211ENST00000550219 KIAA1024LP59773 190 aa13.42□□□□□ -0.26
NUP188-211ENST00000550219 AP1S1P61966 158 aa13.42□□□□□ -0.26
NUP188-211ENST00000550219 CCL7P80098 99 aa13.42□□□□□ -0.26
NUP188-211ENST00000550219 SLC10A7Q0GE19 358 aa13.42□□□□□ -0.26
NUP188-211ENST00000550219 SLC10A2Q12908 348 aaPredicted RBP13.42□□□□□ -0.26
NUP188-211ENST00000550219 TUBB2AQ13885 445 aa13.42□□□□□ -0.26
NUP188-211ENST00000550219 RFTN1Q14699 578 aaPredicted RBP13.42□□□□□ -0.26
NUP188-211ENST00000550219 SIX1Q15475 284 aaPredicted RBP13.42□□□□□ -0.26
NUP188-211ENST00000550219 LIPIQ6XZB0 460 aa13.42□□□□□ -0.26
NUP188-211ENST00000550219 DPPA4Q7L190 304 aa13.42□□□□□ -0.26
NUP188-211ENST00000550219 TAF8Q7Z7C8 310 aa13.42□□□□□ -0.26
NUP188-211ENST00000550219 JAMLQ86YT9 394 aa13.42□□□□□ -0.26
NUP188-211ENST00000550219 ARL14Q8N4G2 192 aa13.42□□□□□ -0.26
NUP188-211ENST00000550219 Q8N9G6 341 aaPredicted RBP13.42□□□□□ -0.26
NUP188-211ENST00000550219 OR56A4Q8NGH8 313 aa13.42□□□□□ -0.26
NUP188-211ENST00000550219 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.42□□□□□ -0.26
NUP188-211ENST00000550219 FUBP1Q96AE4 644 aaKnown RBP13.42□□□□□ -0.26
NUP188-211ENST00000550219 GRAMD1AQ96CP6 724 aa13.42□□□□□ -0.26
NUP188-211ENST00000550219 ECHDC3Q96DC8 303 aa13.42□□□□□ -0.26
NUP188-211ENST00000550219 MS4A14Q96JA4 679 aa13.42□□□□□ -0.26
NUP188-211ENST00000550219 TUBB2BQ9BVA1 445 aa13.42□□□□□ -0.26
NUP188-211ENST00000550219 WDR26Q9H7D7 661 aa13.42□□□□□ -0.26
NUP188-211ENST00000550219 DTLQ9NZJ0 730 aa13.42□□□□□ -0.26
NUP188-211ENST00000550219 B4GALT6Q9UBX8 382 aa13.42□□□□□ -0.26
NUP188-211ENST00000550219 PCDHGA8Q9Y5G5 932 aa13.42□□□□□ -0.26
NUP188-211ENST00000550219 GOLGA6CA6NDK9 693 aa13.41□□□□□ -0.26
NUP188-211ENST00000550219 GOLGA6BA6NDN3 693 aa13.41□□□□□ -0.26
NUP188-211ENST00000550219 PGRMC1O00264 195 aaKnown RBP13.41□□□□□ -0.26
NUP188-211ENST00000550219 MFSD11O43934 449 aa13.41□□□□□ -0.26
NUP188-211ENST00000550219 CPP00450 1065 aa13.41□□□□□ -0.26
NUP188-211ENST00000550219 GOLGA6DP0CG33 693 aa13.41□□□□□ -0.26
NUP188-211ENST00000550219 KELP23276 732 aa13.41□□□□□ -0.26
NUP188-211ENST00000550219 RENBPP51606 427 aa13.41□□□□□ -0.26
NUP188-211ENST00000550219 MAXP61244 160 aa13.41□□□□□ -0.26
NUP188-211ENST00000550219 GBE1Q04446 702 aa13.41□□□□□ -0.26
NUP188-211ENST00000550219 AGERQ15109 404 aa13.41□□□□□ -0.26
NUP188-211ENST00000550219 LVRNQ6Q4G3 990 aa13.41□□□□□ -0.26
NUP188-211ENST00000550219 LRRC49Q8IUZ0 686 aa13.41□□□□□ -0.26
NUP188-211ENST00000550219 SFTPA2Q8IWL1 248 aa13.41□□□□□ -0.26
NUP188-211ENST00000550219 ATPAF2Q8N5M1 289 aa13.41□□□□□ -0.26
NUP188-211ENST00000550219 TTC13Q8NBP0 860 aa13.41□□□□□ -0.26
NUP188-211ENST00000550219 FAM46DQ8NEK8 389 aa13.41□□□□□ -0.26
NUP188-211ENST00000550219 MAIP1Q8WWC4 291 aa13.41□□□□□ -0.26
NUP188-211ENST00000550219 ZNF592Q92610 1267 aa13.41□□□□□ -0.26
NUP188-211ENST00000550219 NUS1Q96E22 293 aa13.41□□□□□ -0.26
NUP188-211ENST00000550219 PRR11Q96HE9 360 aaPredicted RBP13.41□□□□□ -0.26
NUP188-211ENST00000550219 NSMCE3Q96MG7 304 aa13.41□□□□□ -0.26
NUP188-211ENST00000550219 SLC46A1Q96NT5 459 aa13.41□□□□□ -0.26
NUP188-211ENST00000550219 OLFM3Q96PB7 478 aa13.41□□□□□ -0.26
NUP188-211ENST00000550219 RBM15Q96T37 977 aaKnown RBP eCLIP13.41□□□□□ -0.26
NUP188-211ENST00000550219 NAP1L3Q99457 506 aaPredicted RBP13.41□□□□□ -0.26
NUP188-211ENST00000550219 FRMD8P1Q9BZ68 369 aaPredicted RBP13.41□□□□□ -0.26
NUP188-211ENST00000550219 CYP4F12Q9HCS2 524 aa13.41□□□□□ -0.26
NUP188-211ENST00000550219 GOLGA6AQ9NYA3 693 aa13.41□□□□□ -0.26
NUP188-211ENST00000550219 CDC23Q9UJX2 597 aa13.41□□□□□ -0.26
NUP188-211ENST00000550219 PCDHGC4Q9Y5F7 938 aa13.41□□□□□ -0.26
NUP188-211ENST00000550219 A0A1W2PQM1 296 aa13.4□□□□□ -0.26
NUP188-211ENST00000550219 CDRT15L2A8MXV6 281 aa13.4□□□□□ -0.26
NUP188-211ENST00000550219 TK2O00142 265 aa13.4□□□□□ -0.26
NUP188-211ENST00000550219 PDE2AO00408 941 aaPredicted RBP13.4□□□□□ -0.26
NUP188-211ENST00000550219 NTN3O00634 580 aaPredicted RBP13.4□□□□□ -0.26
NUP188-211ENST00000550219 TRAFD1O14545 582 aaPredicted RBP13.4□□□□□ -0.26
NUP188-211ENST00000550219 HGFP14210 728 aa13.4□□□□□ -0.26
NUP188-211ENST00000550219 PECAM1P16284 738 aaPredicted RBP13.4□□□□□ -0.26
NUP188-211ENST00000550219 GM2AP17900 193 aa13.4□□□□□ -0.26
NUP188-211ENST00000550219 INHBCP55103 352 aa13.4□□□□□ -0.26
NUP188-211ENST00000550219 POLR2LP62875 67 aaKnown RBP13.4□□□□□ -0.26
NUP188-211ENST00000550219 DYNLT1P63172 113 aa13.4□□□□□ -0.26
NUP188-211ENST00000550219 GALNT2Q10471 571 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms