RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 PUM1Q14671 1186 aaKnown RBP eCLIP11.87□□□□□ -0.51
PFDN5-208ENST00000549995 ARMC3Q5W041 872 aa11.87□□□□□ -0.51
PFDN5-208ENST00000549995 ZDHHC20Q5W0Z9 365 aa11.87□□□□□ -0.51
PFDN5-208ENST00000549995 KDM7AQ6ZMT4 941 aa11.87□□□□□ -0.51
PFDN5-208ENST00000549995 RFLNAQ6ZTI6 216 aa11.87□□□□□ -0.51
PFDN5-208ENST00000549995 OR2I1PQ8NGU4 316 aa11.87□□□□□ -0.51
PFDN5-208ENST00000549995 CCHCR1Q8TD31 782 aa11.87□□□□□ -0.51
PFDN5-208ENST00000549995 BRSK1Q8TDC3 778 aa11.87□□□□□ -0.51
PFDN5-208ENST00000549995 WDR92Q96MX6 357 aa11.87□□□□□ -0.51
PFDN5-208ENST00000549995 TBL1YQ9BQ87 522 aa11.87□□□□□ -0.51
PFDN5-208ENST00000549995 GTPBP2Q9BX10 602 aaKnown RBP11.87□□□□□ -0.51
PFDN5-208ENST00000549995 FRMD8Q9BZ67 464 aaPredicted RBP11.87□□□□□ -0.51
PFDN5-208ENST00000549995 WDR26Q9H7D7 661 aa11.87□□□□□ -0.51
PFDN5-208ENST00000549995 DGKBQ9Y6T7 804 aa11.87□□□□□ -0.51
PFDN5-208ENST00000549995 AURKAO14965 403 aa11.86□□□□□ -0.51
PFDN5-208ENST00000549995 PIAS2O75928 621 aa11.86□□□□□ -0.51
PFDN5-208ENST00000549995 PCCBP05166 539 aa11.86□□□□□ -0.51
PFDN5-208ENST00000549995 ETS1P14921 441 aa11.86□□□□□ -0.51
PFDN5-208ENST00000549995 TPSB2P20231 275 aa11.86□□□□□ -0.51
PFDN5-208ENST00000549995 TNNT3P45378 269 aaPredicted RBP11.86□□□□□ -0.51
PFDN5-208ENST00000549995 KCNJ1P48048 391 aa11.86□□□□□ -0.51
PFDN5-208ENST00000549995 CDK3Q00526 305 aa11.86□□□□□ -0.51
PFDN5-208ENST00000549995 SNX1Q13596 522 aa11.86□□□□□ -0.51
PFDN5-208ENST00000549995 TAF1AQ15573 450 aaPredicted RBP11.86□□□□□ -0.51
PFDN5-208ENST00000549995 TPSAB1Q15661 275 aa11.86□□□□□ -0.51
PFDN5-208ENST00000549995 GLRX5Q86SX6 157 aa11.86□□□□□ -0.51
PFDN5-208ENST00000549995 LINC00523Q86TU6 105 aa11.86□□□□□ -0.51
PFDN5-208ENST00000549995 C17orf53Q8N3J3 647 aaPredicted RBP11.86□□□□□ -0.51
PFDN5-208ENST00000549995 TRAM1L1Q8N609 369 aa11.86□□□□□ -0.51
PFDN5-208ENST00000549995 CCDC89Q8N998 374 aa11.86□□□□□ -0.51
PFDN5-208ENST00000549995 GPR26Q8NDV2 337 aa11.86□□□□□ -0.51
PFDN5-208ENST00000549995 BTN2A2Q8WVV5 523 aa11.86□□□□□ -0.51
PFDN5-208ENST00000549995 SCAMP4Q969E2 229 aa11.86□□□□□ -0.51
PFDN5-208ENST00000549995 LRRC45Q96CN5 670 aa11.86□□□□□ -0.51
PFDN5-208ENST00000549995 AP2M1Q96CW1 435 aa11.86□□□□□ -0.51
PFDN5-208ENST00000549995 VPS35Q96QK1 796 aa11.86□□□□□ -0.51
PFDN5-208ENST00000549995 ZSCAN5AQ9BUG6 496 aa11.86□□□□□ -0.51
PFDN5-208ENST00000549995 FAM83DQ9H4H8 585 aa11.86□□□□□ -0.51
PFDN5-208ENST00000549995 ETNK1Q9HBU6 452 aa11.86□□□□□ -0.51
PFDN5-208ENST00000549995 PHPT1Q9NRX4 125 aaPredicted RBP11.86□□□□□ -0.51
PFDN5-208ENST00000549995 SMOXQ9NWM0 555 aa11.86□□□□□ -0.51
PFDN5-208ENST00000549995 SMARCAL1Q9NZC9 954 aa11.86□□□□□ -0.51
PFDN5-208ENST00000549995 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.86□□□□□ -0.51
PFDN5-208ENST00000549995 PCYOX1Q9UHG3 505 aa11.86□□□□□ -0.51
PFDN5-208ENST00000549995 KLF15Q9UIH9 416 aa11.86□□□□□ -0.51
PFDN5-208ENST00000549995 RIMKLBQ9ULI2 386 aa11.86□□□□□ -0.51
PFDN5-208ENST00000549995 CNOT6Q9ULM6 557 aaKnown RBP11.86□□□□□ -0.51
PFDN5-208ENST00000549995 SLC17A4Q9Y2C5 497 aa11.86□□□□□ -0.51
PFDN5-208ENST00000549995 CSNK1G3Q9Y6M4 447 aa11.86□□□□□ -0.51
PFDN5-208ENST00000549995 TDRD6O60522 2096 aaKnown RBP11.85□□□□□ -0.51
PFDN5-208ENST00000549995 COL27A1Q8IZC6 1860 aaPredicted RBP11.85□□□□□ -0.51
PFDN5-208ENST00000549995 GOLGA6L10A0A0M3HER8 536 aa11.85□□□□□ -0.51
PFDN5-208ENST00000549995 PCNX2A6NKB5 2137 aa11.85□□□□□ -0.51
PFDN5-208ENST00000549995 AGAP14A8MT82 685 aa11.85□□□□□ -0.51
PFDN5-208ENST00000549995 FADS2P1A8MWK0 482 aa11.85□□□□□ -0.51
PFDN5-208ENST00000549995 F5H423 210 aaPredicted RBP11.85□□□□□ -0.51
PFDN5-208ENST00000549995 H7C0S8 307 aa11.85□□□□□ -0.51
PFDN5-208ENST00000549995 CCDC188H7C350 402 aa11.85□□□□□ -0.51
PFDN5-208ENST00000549995 CACNB4O00305 520 aaPredicted RBP11.85□□□□□ -0.51
PFDN5-208ENST00000549995 PDE2AO00408 941 aaPredicted RBP11.85□□□□□ -0.51
PFDN5-208ENST00000549995 GAPDHSO14556 408 aaPredicted RBP11.85□□□□□ -0.51
PFDN5-208ENST00000549995 LDB2O43679 373 aa11.85□□□□□ -0.51
PFDN5-208ENST00000549995 DKK1O94907 266 aa11.85□□□□□ -0.51
PFDN5-208ENST00000549995 IFNB1P01574 187 aa11.85□□□□□ -0.51
PFDN5-208ENST00000549995 PIRTP0C851 137 aa11.85□□□□□ -0.51
PFDN5-208ENST00000549995 BPIP17213 487 aa11.85□□□□□ -0.51
PFDN5-208ENST00000549995 KELP23276 732 aa11.85□□□□□ -0.51
PFDN5-208ENST00000549995 HTR1BP28222 390 aa11.85□□□□□ -0.51
PFDN5-208ENST00000549995 ACTN2P35609 894 aa11.85□□□□□ -0.51
PFDN5-208ENST00000549995 ZNF140P52738 457 aaPredicted RBP11.85□□□□□ -0.51
PFDN5-208ENST00000549995 THOP1P52888 689 aa11.85□□□□□ -0.51
PFDN5-208ENST00000549995 HNRNPKP61978 463 aaKnown RBP eCLIP11.85□□□□□ -0.51
PFDN5-208ENST00000549995 CDK16Q00536 496 aa11.85□□□□□ -0.51
PFDN5-208ENST00000549995 PDE1BQ01064 536 aa11.85□□□□□ -0.51
PFDN5-208ENST00000549995 CDH17Q12864 832 aa11.85□□□□□ -0.51
PFDN5-208ENST00000549995 OLIG2Q13516 323 aa11.85□□□□□ -0.51
PFDN5-208ENST00000549995 SUZ12Q15022 739 aaKnown RBP11.85□□□□□ -0.51
PFDN5-208ENST00000549995 FAXCQ5TGI0 409 aa11.85□□□□□ -0.51
PFDN5-208ENST00000549995 CCDC137Q6PK04 289 aaKnown RBP11.85□□□□□ -0.51
PFDN5-208ENST00000549995 ZNF572Q7Z3I7 529 aaPredicted RBP11.85□□□□□ -0.51
PFDN5-208ENST00000549995 KDELC2Q7Z4H8 507 aa11.85□□□□□ -0.51
PFDN5-208ENST00000549995 HEATR4Q86WZ0 1026 aa11.85□□□□□ -0.51
PFDN5-208ENST00000549995 NAXDQ8IW45 347 aa11.85□□□□□ -0.51
PFDN5-208ENST00000549995 SDR16C5Q8N3Y7 309 aa11.85□□□□□ -0.51
PFDN5-208ENST00000549995 SLC25A41Q8N5S1 370 aa11.85□□□□□ -0.51
PFDN5-208ENST00000549995 PDCD7Q8N8D1 485 aaKnown RBP11.85□□□□□ -0.51
PFDN5-208ENST00000549995 GRK7Q8WTQ7 553 aa11.85□□□□□ -0.51
PFDN5-208ENST00000549995 PEX13Q92968 403 aa11.85□□□□□ -0.51
PFDN5-208ENST00000549995 MAGOHBQ96A72 148 aaKnown RBP11.85□□□□□ -0.51
PFDN5-208ENST00000549995 RANBP9Q96S59 729 aa11.85□□□□□ -0.51
PFDN5-208ENST00000549995 AGAP2Q99490 1192 aa11.85□□□□□ -0.51
PFDN5-208ENST00000549995 RIOK2Q9BVS4 552 aaKnown RBP11.85□□□□□ -0.51
PFDN5-208ENST00000549995 LGR4Q9BXB1 951 aa11.85□□□□□ -0.51
PFDN5-208ENST00000549995 AP1M1Q9BXS5 423 aa11.85□□□□□ -0.51
PFDN5-208ENST00000549995 GPR63Q9BZJ6 419 aa11.85□□□□□ -0.51
PFDN5-208ENST00000549995 FGF22Q9HCT0 170 aa11.85□□□□□ -0.51
PFDN5-208ENST00000549995 CASS4Q9NQ75 786 aa11.85□□□□□ -0.51
PFDN5-208ENST00000549995 VPS18Q9P253 973 aa11.85□□□□□ -0.51
PFDN5-208ENST00000549995 PCOLCE2Q9UKZ9 415 aa11.85□□□□□ -0.51
PFDN5-208ENST00000549995 SHOC2Q9UQ13 582 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms