RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 CA5BQ9Y2D0 317 aa17.4■□□□□ 0.38
HDAC7-227ENST00000548080 PCDHGA5Q9Y5G8 931 aa17.4■□□□□ 0.38
HDAC7-227ENST00000548080 FAM237BA0A1B0GVD1 139 aa17.39■□□□□ 0.37
HDAC7-227ENST00000548080 TCRBV9S1A1TA0A576 114 aa17.39■□□□□ 0.37
HDAC7-227ENST00000548080 A8MX80 341 aa17.39■□□□□ 0.37
HDAC7-227ENST00000548080 TRAFD1O14545 582 aaPredicted RBP17.39■□□□□ 0.37
HDAC7-227ENST00000548080 WNT9AO14904 365 aa17.39■□□□□ 0.37
HDAC7-227ENST00000548080 POLBP06746 335 aa17.39■□□□□ 0.37
HDAC7-227ENST00000548080 ATXN1LP0C7T5 689 aaKnown RBP17.39■□□□□ 0.37
HDAC7-227ENST00000548080 HLA-DPA1P20036 260 aa17.39■□□□□ 0.37
HDAC7-227ENST00000548080 XPAP23025 273 aaPredicted RBP17.39■□□□□ 0.37
HDAC7-227ENST00000548080 CHRNA4P43681 627 aa17.39■□□□□ 0.37
HDAC7-227ENST00000548080 LONRF1Q17RB8 773 aa17.39■□□□□ 0.37
HDAC7-227ENST00000548080 KLHL38Q2WGJ6 581 aa17.39■□□□□ 0.37
HDAC7-227ENST00000548080 PCID2Q5JVF3 399 aa17.39■□□□□ 0.37
HDAC7-227ENST00000548080 SPANXN3Q5MJ09 141 aa17.39■□□□□ 0.37
HDAC7-227ENST00000548080 ARMC3Q5W041 872 aa17.39■□□□□ 0.37
HDAC7-227ENST00000548080 CYS1Q717R9 158 aa17.39■□□□□ 0.37
HDAC7-227ENST00000548080 ZNF641Q96N77 438 aaPredicted RBP17.39■□□□□ 0.37
HDAC7-227ENST00000548080 SLC6A18Q96N87 628 aa17.39■□□□□ 0.37
HDAC7-227ENST00000548080 SMIM14Q96QK8 99 aa17.39■□□□□ 0.37
HDAC7-227ENST00000548080 CYTH2Q99418 400 aa17.39■□□□□ 0.37
HDAC7-227ENST00000548080 ORAI3Q9BRQ5 295 aa17.39■□□□□ 0.37
HDAC7-227ENST00000548080 WRAP53Q9BUR4 548 aaKnown RBP17.39■□□□□ 0.37
HDAC7-227ENST00000548080 CENPHQ9H3R5 247 aa17.39■□□□□ 0.37
HDAC7-227ENST00000548080 PPCSQ9HAB8 311 aa17.39■□□□□ 0.37
HDAC7-227ENST00000548080 PREBQ9HCU5 417 aa17.39■□□□□ 0.37
HDAC7-227ENST00000548080 PCDH12Q9NPG4 1184 aa17.39■□□□□ 0.37
HDAC7-227ENST00000548080 RXFP3Q9NSD7 469 aa17.39■□□□□ 0.37
HDAC7-227ENST00000548080 SOX13Q9UN79 622 aa17.39■□□□□ 0.37
HDAC7-227ENST00000548080 LRRK1Q38SD2 2015 aa17.39■□□□□ 0.37
HDAC7-227ENST00000548080 SMIM23A6NLE4 172 aa17.38■□□□□ 0.37
HDAC7-227ENST00000548080 UPK3BL1B0FP48 263 aa17.38■□□□□ 0.37
HDAC7-227ENST00000548080 UPK3BL2E5RIL1 263 aa17.38■□□□□ 0.37
HDAC7-227ENST00000548080 SLC31A1O15431 190 aa17.38■□□□□ 0.37
HDAC7-227ENST00000548080 NDST3O95803 873 aa17.38■□□□□ 0.37
HDAC7-227ENST00000548080 FGF1P05230 155 aa17.38■□□□□ 0.37
HDAC7-227ENST00000548080 MAPK8P45983 427 aa17.38■□□□□ 0.37
HDAC7-227ENST00000548080 SLCO1A2P46721 670 aa17.38■□□□□ 0.37
HDAC7-227ENST00000548080 CCR5P51681 352 aa17.38■□□□□ 0.37
HDAC7-227ENST00000548080 GRM3Q14832 879 aa17.38■□□□□ 0.37
HDAC7-227ENST00000548080 TRIM61Q5EBN2 209 aa17.38■□□□□ 0.37
HDAC7-227ENST00000548080 SIRPB2Q5JXA9 342 aa17.38■□□□□ 0.37
HDAC7-227ENST00000548080 AGBL2Q5U5Z8 902 aa17.38■□□□□ 0.37
HDAC7-227ENST00000548080 PTCD2Q8WV60 388 aaKnown RBP17.38■□□□□ 0.37
HDAC7-227ENST00000548080 DNASE2BQ8WZ79 361 aa17.38■□□□□ 0.37
HDAC7-227ENST00000548080 TRIB3Q96RU7 358 aa17.38■□□□□ 0.37
HDAC7-227ENST00000548080 TRIM56Q9BRZ2 755 aaKnown RBP17.38■□□□□ 0.37
HDAC7-227ENST00000548080 KIFC1Q9BW19 673 aa17.38■□□□□ 0.37
HDAC7-227ENST00000548080 PCED1AQ9H1Q7 454 aa17.38■□□□□ 0.37
HDAC7-227ENST00000548080 DKK3Q9UBP4 350 aa17.38■□□□□ 0.37
HDAC7-227ENST00000548080 FETUBQ9UGM5 382 aa17.38■□□□□ 0.37
HDAC7-227ENST00000548080 COQ6Q9Y2Z9 468 aa17.38■□□□□ 0.37
HDAC7-227ENST00000548080 PCDHB9Q9Y5E1 797 aa17.38■□□□□ 0.37
HDAC7-227ENST00000548080 RAI2Q9Y5P3 530 aa17.38■□□□□ 0.37
HDAC7-227ENST00000548080 RPS6KL1Q9Y6S9 549 aa17.38■□□□□ 0.37
HDAC7-227ENST00000548080 A0A0U1RQS6 177 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.37■□□□□ 0.37
HDAC7-227ENST00000548080 TSPAN11A1L157 253 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 IGLON5A6NGN9 336 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 GOLGA8CPA6NN73 597 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 C10orf142B7Z368 130 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 POC1B-GALNT4F8VUJ3 575 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 GDF9O60383 454 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 MMP20O60882 483 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 USP1O94782 785 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 PDHA1P08559 390 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 CA4P22748 312 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 ADRA1DP25100 572 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 OAS2P29728 719 aaKnown RBP17.37■□□□□ 0.37
HDAC7-227ENST00000548080 IRX4P78413 519 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 CCDC15Q0P6D6 951 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 POU6F1Q14863 301 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 CRYMQ14894 314 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 UGP2Q16851 508 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 ZNF284Q2VY69 593 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 ANKRD20A4Q4UJ75 823 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 TTMPQ5BVD1 217 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 PEAR1Q5VY43 1037 aaPredicted RBP17.37■□□□□ 0.37
HDAC7-227ENST00000548080 KDM7AQ6ZMT4 941 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 TMEM135Q86UB9 458 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 TRIM69Q86WT6 500 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 HORMAD1Q86X24 394 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 TDRPQ86YL5 185 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 PPHLN1Q8NEY8 458 aaKnown RBP17.37■□□□□ 0.37
HDAC7-227ENST00000548080 C1orf216Q8TAB5 229 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 PGM2Q96G03 612 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 ATP6V1G3Q96LB4 118 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 TDRD1Q9BXT4 1180 aaKnown RBP17.37■□□□□ 0.37
HDAC7-227ENST00000548080 KDM4CQ9H3R0 1056 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 MRM3Q9HC36 420 aaKnown RBP17.37■□□□□ 0.37
HDAC7-227ENST00000548080 TM9SF3Q9HD45 589 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 CHRAC1Q9NRG0 131 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 MOCS1Q9NZB8 636 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 SLC24A2Q9UI40 661 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 CHKBQ9Y259 395 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 TP53BP1Q12888 1972 aaPredicted RBP17.37■□□□□ 0.37
HDAC7-227ENST00000548080 A0A1W2PPC4 97 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 AREL1O15033 823 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 RGS16O15492 202 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms