RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 EPHX1P07099 455 aa12.34□□□□□ -0.43
RAB5B-204ENST00000548068 CTSLP07711 333 aa12.34□□□□□ -0.43
RAB5B-204ENST00000548068 GLULP15104 373 aa12.34□□□□□ -0.43
RAB5B-204ENST00000548068 SP100P23497 879 aaPredicted RBP12.34□□□□□ -0.43
RAB5B-204ENST00000548068 ABCG1P45844 678 aa12.34□□□□□ -0.43
RAB5B-204ENST00000548068 WDR4P57081 412 aaKnown RBP12.34□□□□□ -0.43
RAB5B-204ENST00000548068 PFKPQ01813 784 aa12.34□□□□□ -0.43
RAB5B-204ENST00000548068 ELP6Q0PNE2 266 aa12.34□□□□□ -0.43
RAB5B-204ENST00000548068 PEX6Q13608 980 aa12.34□□□□□ -0.43
RAB5B-204ENST00000548068 ZKSCAN8Q15776 578 aaPredicted RBP12.34□□□□□ -0.43
RAB5B-204ENST00000548068 PDK4Q16654 411 aa12.34□□□□□ -0.43
RAB5B-204ENST00000548068 CDKN3Q16667 212 aa12.34□□□□□ -0.43
RAB5B-204ENST00000548068 TSNAXIP1Q2TAA8 658 aa12.34□□□□□ -0.43
RAB5B-204ENST00000548068 PRPF38BQ5VTL8 546 aaKnown RBP12.34□□□□□ -0.43
RAB5B-204ENST00000548068 LRRC66Q68CR7 880 aa12.34□□□□□ -0.43
RAB5B-204ENST00000548068 CNSTQ6PJW8 725 aa12.34□□□□□ -0.43
RAB5B-204ENST00000548068 DPPA4Q7L190 304 aa12.34□□□□□ -0.43
RAB5B-204ENST00000548068 TRMT11Q7Z4G4 463 aaKnown RBP12.34□□□□□ -0.43
RAB5B-204ENST00000548068 SNX20Q7Z614 316 aa12.34□□□□□ -0.43
RAB5B-204ENST00000548068 CMC1Q7Z7K0 106 aa12.34□□□□□ -0.43
RAB5B-204ENST00000548068 SLC41A1Q8IVJ1 513 aa12.34□□□□□ -0.43
RAB5B-204ENST00000548068 ZNF366Q8N895 744 aa12.34□□□□□ -0.43
RAB5B-204ENST00000548068 ZNF513Q8N8E2 541 aaPredicted RBP12.34□□□□□ -0.43
RAB5B-204ENST00000548068 PIP4K2CQ8TBX8 421 aa12.34□□□□□ -0.43
RAB5B-204ENST00000548068 SREK1Q8WXA9 508 aaKnown RBP12.34□□□□□ -0.43
RAB5B-204ENST00000548068 ULK4Q96C45 1275 aa12.34□□□□□ -0.43
RAB5B-204ENST00000548068 CHFRQ96EP1 664 aa12.34□□□□□ -0.43
RAB5B-204ENST00000548068 CHMP6Q96FZ7 201 aa12.34□□□□□ -0.43
RAB5B-204ENST00000548068 FAM111AQ96PZ2 611 aa12.34□□□□□ -0.43
RAB5B-204ENST00000548068 SMIM14Q96QK8 99 aa12.34□□□□□ -0.43
RAB5B-204ENST00000548068 FBRSQ9HAH7 460 aa12.34□□□□□ -0.43
RAB5B-204ENST00000548068 POPDC3Q9HBV1 291 aa12.34□□□□□ -0.43
RAB5B-204ENST00000548068 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.34□□□□□ -0.43
RAB5B-204ENST00000548068 SLC17A7Q9P2U7 560 aa12.34□□□□□ -0.43
RAB5B-204ENST00000548068 ACOT9Q9Y305 439 aa12.34□□□□□ -0.43
RAB5B-204ENST00000548068 TCF20Q9UGU0 1960 aaKnown RBP12.34□□□□□ -0.43
RAB5B-204ENST00000548068 UBA6A0AVT1 1052 aaPredicted RBP12.33□□□□□ -0.44
RAB5B-204ENST00000548068 PSMD11O00231 422 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 BIRC5O15392 142 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 SRP72O76094 671 aaKnown RBP12.33□□□□□ -0.44
RAB5B-204ENST00000548068 PRAMEF1O95521 474 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 C2P06681 752 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 DHRS4L1P0CG22 281 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 HLA-EP13747 358 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 TIMP2P16035 220 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 SAT1P21673 171 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 CTHP32929 405 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 SLC26A3P40879 764 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 IL12RB1P42701 662 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 PTGER3P43115 390 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 CSRP3P50461 194 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 GALK1P51570 392 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 ADARP55265 1226 aaKnown RBP12.33□□□□□ -0.44
RAB5B-204ENST00000548068 DCDC1P59894 354 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 XIAPP98170 497 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 CCDC15Q0P6D6 951 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 ITGA9Q13797 1035 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 ENPP2Q13822 863 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 PUS10Q3MIT2 529 aaKnown RBP12.33□□□□□ -0.44
RAB5B-204ENST00000548068 HECTD2Q5U5R9 776 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 EGFLAMQ63HQ2 1017 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 NAIF1Q69YI7 327 aaPredicted RBP12.33□□□□□ -0.44
RAB5B-204ENST00000548068 SDE2Q6IQ49 451 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 RGS9BPQ6ZS82 235 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 PARS2Q7L3T8 475 aaKnown RBP12.33□□□□□ -0.44
RAB5B-204ENST00000548068 TAS2R42Q7RTR8 314 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 CLEC14AQ86T13 490 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 TBC1D1Q86TI0 1168 aaPredicted RBP12.33□□□□□ -0.44
RAB5B-204ENST00000548068 TTC7BQ86TV6 843 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 TSPAN33Q86UF1 283 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 RAB3IL1Q8TBN0 382 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 DTX3LQ8TDB6 740 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 LRRC8CQ8TDW0 803 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 LPGAT1Q92604 370 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 HLA-CQ95604 372 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 LRCH3Q96II8 777 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 OMDQ99983 421 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 MTG2Q9H4K7 406 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 CAB39LQ9H9S4 337 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 MLXIPLQ9NP71 852 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 PCDH12Q9NPG4 1184 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.33□□□□□ -0.44
RAB5B-204ENST00000548068 NFKBIL1Q9UBC1 381 aaPredicted RBP12.33□□□□□ -0.44
RAB5B-204ENST00000548068 PPM1HQ9ULR3 514 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 FNDC3AQ9Y2H6 1198 aaKnown RBP12.33□□□□□ -0.44
RAB5B-204ENST00000548068 VWA7Q9Y334 891 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 PCDHB1Q9Y5F3 818 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 STON1Q9Y6Q2 735 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 CKAP5Q14008 2032 aa12.33□□□□□ -0.44
RAB5B-204ENST00000548068 BRWD1Q9NSI6 2320 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 PLXNA2O75051 1894 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 LAMA3Q16787 3333 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 TRBV5-4A0A0C4DH59 114 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 H0Y858 1186 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 H3BMM5 538 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 SYNCRIPO60506 623 aaKnown RBP12.32□□□□□ -0.44
RAB5B-204ENST00000548068 PLIN3O60664 434 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 ADH1BP00325 375 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 IL1BP01584 269 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 ESR1P03372 595 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms