RNA–Protein interactions for RNA: ENST00000547948.1

AC078880.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC078880.2, Length 843 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078880.2-201ENST00000547948 CSKP41240 450 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 CD86P42081 329 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 SERPINH1P50454 418 aaKnown RBP5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 WNT3AP56704 352 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 CBX1P83916 185 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 RAD51Q06609 339 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 NSUN2Q08J23 767 aaKnown RBP eCLIP5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 MGAT5Q09328 741 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 DNAJC3Q13217 504 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 THOC5Q13769 683 aaKnown RBP5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 PDGFRLQ15198 375 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 ZNF77Q15935 545 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 PCID2Q5JVF3 399 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 SYCP2LQ5T4T6 812 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 STEAP4Q687X5 459 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 KCTD16Q68DU8 428 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 KCTD11Q693B1 232 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 CXorf57Q6NSI4 855 aaKnown RBP5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 UNC5AQ6ZN44 842 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 DBX2Q6ZNG2 339 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 ARHGAP36Q6ZRI8 547 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 ZNF534Q76KX8 674 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 MARK2Q7KZI7 788 aaKnown RBP5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 GET4Q7L5D6 327 aaPredicted RBP5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 UBE3DQ7Z6J8 389 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 RBM23Q86U06 439 aaKnown RBP5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 C12orf40Q86WS4 652 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 BBS7Q8IWZ6 715 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 NDUFAF2Q8N183 169 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 EFHBQ8N7U6 833 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 CNTD1Q8N815 330 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 NETO2Q8NC67 525 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 TET1Q8NFU7 2136 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 VN1R2Q8NFZ6 395 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 OR7D4Q8NG98 312 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 OR52K1Q8NGK4 314 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 WFIKKN2Q8TEU8 576 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 SLC44A1Q8WWI5 657 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 ZNF669Q96BR6 464 aaPredicted RBP5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 TLCD1Q96CP7 247 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 CERS2Q96G23 380 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 SGSM3Q96HU1 749 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 RIPOR3Q96MK2 946 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 PWWP2AQ96N64 755 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 TSNARE1Q96NA8 513 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 ALPK1Q96QP1 1244 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 NUDCD1Q96RS6 583 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 RANBP9Q96S59 729 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 SEMA3CQ99985 751 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 BBS2Q9BXC9 721 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 CAPS2Q9BXY5 557 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 ACE2Q9BYF1 805 aaPredicted RBP5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 SLC2A11Q9BYW1 496 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 NSRP1Q9H0G5 558 aaKnown RBP5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 NOL6Q9H6R4 1146 aaKnown RBP5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 HCFC1R1Q9NWW0 138 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 SYBUQ9NX95 663 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 PSD3Q9NYI0 1048 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 HACD3Q9P035 362 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 DNMT3BQ9UBC3 853 aaKnown RBP5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 ZNF212Q9UDV6 495 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 TCAF1Q9Y4C2 921 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 RPS6KL1Q9Y6S9 549 aa5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 MKI67P46013 3256 aaKnown RBP5.04□□□□□ -1.6
AC078880.2-201ENST00000547948 PTPRSQ13332 1948 aa5.03□□□□□ -1.6
AC078880.2-201ENST00000547948 ALPK3Q96L96 1907 aa5.03□□□□□ -1.6
AC078880.2-201ENST00000547948 A0A0D9SEW6 157 aa5.03□□□□□ -1.6
AC078880.2-201ENST00000547948 A0A1W2PPC1 479 aa5.03□□□□□ -1.6
AC078880.2-201ENST00000547948 FAM47DPA6NHR8 397 aa5.03□□□□□ -1.6
AC078880.2-201ENST00000547948 FAM159BA6NKW6 160 aa5.03□□□□□ -1.6
AC078880.2-201ENST00000547948 C2orf81A6NN90 581 aa5.03□□□□□ -1.6
AC078880.2-201ENST00000547948 SRRM3A6NNA2 597 aaPredicted RBP5.03□□□□□ -1.6
AC078880.2-201ENST00000547948 PRR33A8MZF0 331 aa5.03□□□□□ -1.6
AC078880.2-201ENST00000547948 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.03□□□□□ -1.6
AC078880.2-201ENST00000547948 B2RBV5 119 aa5.03□□□□□ -1.6
AC078880.2-201ENST00000547948 NEDD8-MDP1E9PL57 170 aa5.03□□□□□ -1.6
AC078880.2-201ENST00000547948 PER2O15055 1255 aa5.03□□□□□ -1.6
AC078880.2-201ENST00000547948 TM9SF1O15321 606 aa5.03□□□□□ -1.6
AC078880.2-201ENST00000547948 PRPF4O43172 522 aaKnown RBP eCLIP5.03□□□□□ -1.6
AC078880.2-201ENST00000547948 HOXC11O43248 304 aaPredicted RBP5.03□□□□□ -1.6
AC078880.2-201ENST00000547948 AVILO75366 819 aa5.03□□□□□ -1.6
AC078880.2-201ENST00000547948 BANF1O75531 89 aa5.03□□□□□ -1.6
AC078880.2-201ENST00000547948 ALDH1A2O94788 518 aa5.03□□□□□ -1.6
AC078880.2-201ENST00000547948 ZWINTO95229 277 aa5.03□□□□□ -1.6
AC078880.2-201ENST00000547948 PAPSS2O95340 614 aaPredicted RBP5.03□□□□□ -1.6
AC078880.2-201ENST00000547948 NDST3O95803 873 aa5.03□□□□□ -1.6
AC078880.2-201ENST00000547948 PEX11BO96011 259 aa5.03□□□□□ -1.6
AC078880.2-201ENST00000547948 MT-CYBP00156 380 aaPredicted RBP5.03□□□□□ -1.6
AC078880.2-201ENST00000547948 PENKP01210 267 aaPredicted RBP5.03□□□□□ -1.6
AC078880.2-201ENST00000547948 MT-ND3P03897 115 aa5.03□□□□□ -1.6
AC078880.2-201ENST00000547948 SNRPAP09012 282 aaKnown RBP5.03□□□□□ -1.6
AC078880.2-201ENST00000547948 PABPC1P11940 636 aaKnown RBP5.03□□□□□ -1.6
AC078880.2-201ENST00000547948 ALADP13716 330 aa5.03□□□□□ -1.6
AC078880.2-201ENST00000547948 BRAFP15056 766 aa5.03□□□□□ -1.6
AC078880.2-201ENST00000547948 GJA1P17302 382 aa5.03□□□□□ -1.6
AC078880.2-201ENST00000547948 ADRA1DP25100 572 aa5.03□□□□□ -1.6
AC078880.2-201ENST00000547948 SERPINA4P29622 427 aa5.03□□□□□ -1.6
AC078880.2-201ENST00000547948 SPRP35270 261 aaPredicted RBP5.03□□□□□ -1.6
AC078880.2-201ENST00000547948 GP5P40197 560 aa5.03□□□□□ -1.6
AC078880.2-201ENST00000547948 MTHFRP42898 656 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms