RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 PHPT1Q9NRX4 125 aaPredicted RBP18.67■□□□□ 0.58
PRPF40B-206ENST00000547764 PKD2L2Q9NZM6 624 aa18.67■□□□□ 0.58
PRPF40B-206ENST00000547764 WASF3Q9UPY6 502 aa18.67■□□□□ 0.58
PRPF40B-206ENST00000547764 ZNF711Q9Y462 761 aa18.67■□□□□ 0.58
PRPF40B-206ENST00000547764 SPO11Q9Y5K1 396 aa18.67■□□□□ 0.58
PRPF40B-206ENST00000547764 DGKBQ9Y6T7 804 aa18.67■□□□□ 0.58
PRPF40B-206ENST00000547764 SPEGQ15772 3267 aa18.66■□□□□ 0.58
PRPF40B-206ENST00000547764 RGSL1A5PLK6 1076 aa18.66■□□□□ 0.58
PRPF40B-206ENST00000547764 C5orf60A6NFR6 353 aa18.66■□□□□ 0.58
PRPF40B-206ENST00000547764 TNFRSF10CO14798 259 aa18.66■□□□□ 0.58
PRPF40B-206ENST00000547764 DKK1O94907 266 aa18.66■□□□□ 0.58
PRPF40B-206ENST00000547764 TRIM16O95361 564 aa18.66■□□□□ 0.58
PRPF40B-206ENST00000547764 TNFP01375 233 aa18.66■□□□□ 0.58
PRPF40B-206ENST00000547764 ALPPL2P10696 532 aa18.66■□□□□ 0.58
PRPF40B-206ENST00000547764 PSMB4P28070 264 aa18.66■□□□□ 0.58
PRPF40B-206ENST00000547764 TNNT3P45378 269 aaPredicted RBP18.66■□□□□ 0.58
PRPF40B-206ENST00000547764 GEMP55040 296 aa18.66■□□□□ 0.58
PRPF40B-206ENST00000547764 SIRPB2Q5JXA9 342 aa18.66■□□□□ 0.58
PRPF40B-206ENST00000547764 TMC3Q7Z5M5 1100 aa18.66■□□□□ 0.58
PRPF40B-206ENST00000547764 REXO1L1PQ8IX06 675 aa18.66■□□□□ 0.58
PRPF40B-206ENST00000547764 ADAMTS14Q8WXS8 1223 aa18.66■□□□□ 0.58
PRPF40B-206ENST00000547764 ATG4AQ8WYN0 398 aa18.66■□□□□ 0.58
PRPF40B-206ENST00000547764 SRPK1Q96SB4 655 aaKnown RBP18.66■□□□□ 0.58
PRPF40B-206ENST00000547764 TMEM121Q9BTD3 319 aa18.66■□□□□ 0.58
PRPF40B-206ENST00000547764 DUSP23Q9BVJ7 150 aa18.66■□□□□ 0.58
PRPF40B-206ENST00000547764 GPR63Q9BZJ6 419 aa18.66■□□□□ 0.58
PRPF40B-206ENST00000547764 CLPBQ9H078 707 aa18.66■□□□□ 0.58
PRPF40B-206ENST00000547764 FAM83DQ9H4H8 585 aa18.66■□□□□ 0.58
PRPF40B-206ENST00000547764 AURKAO14965 403 aa18.65■□□□□ 0.58
PRPF40B-206ENST00000547764 HYAL3O43820 417 aaPredicted RBP18.65■□□□□ 0.58
PRPF40B-206ENST00000547764 AGTP01019 485 aa18.65■□□□□ 0.58
PRPF40B-206ENST00000547764 SLC4A1P02730 911 aa18.65■□□□□ 0.58
PRPF40B-206ENST00000547764 CELA2BP08218 269 aaPredicted RBP18.65■□□□□ 0.58
PRPF40B-206ENST00000547764 CTSEP14091 401 aa18.65■□□□□ 0.58
PRPF40B-206ENST00000547764 CKMT2P17540 419 aa18.65■□□□□ 0.58
PRPF40B-206ENST00000547764 GDF10P55107 478 aa18.65■□□□□ 0.58
PRPF40B-206ENST00000547764 SLC1A5Q15758 541 aa18.65■□□□□ 0.58
PRPF40B-206ENST00000547764 DEFB133Q30KQ1 61 aa18.65■□□□□ 0.58
PRPF40B-206ENST00000547764 CCDC157Q569K6 752 aa18.65■□□□□ 0.58
PRPF40B-206ENST00000547764 ADAMTSL4Q6UY14 1074 aa18.65■□□□□ 0.58
PRPF40B-206ENST00000547764 RAB44Q7Z6P3 723 aaPredicted RBP18.65■□□□□ 0.58
PRPF40B-206ENST00000547764 FSTL5Q8N475 847 aaPredicted RBP18.65■□□□□ 0.58
PRPF40B-206ENST00000547764 CHCHD4Q8N4Q1 142 aa18.65■□□□□ 0.58
PRPF40B-206ENST00000547764 FSD1LQ9BXM9 530 aa18.65■□□□□ 0.58
PRPF40B-206ENST00000547764 MOSPD1Q9UJG1 213 aa18.65■□□□□ 0.58
PRPF40B-206ENST00000547764 AAR2Q9Y312 384 aaKnown RBP18.65■□□□□ 0.58
PRPF40B-206ENST00000547764 LRP4O75096 1905 aa18.64■□□□□ 0.58
PRPF40B-206ENST00000547764 GOLGA4Q13439 2230 aaKnown RBP18.64■□□□□ 0.57
PRPF40B-206ENST00000547764 PRSS38A1L453 326 aa18.64■□□□□ 0.57
PRPF40B-206ENST00000547764 LMO7DNF2Z398 122 aa18.64■□□□□ 0.57
PRPF40B-206ENST00000547764 TPP1O14773 563 aa18.64■□□□□ 0.57
PRPF40B-206ENST00000547764 LIASO43766 372 aa18.64■□□□□ 0.57
PRPF40B-206ENST00000547764 CEACAM5P06731 702 aa18.64■□□□□ 0.57
PRPF40B-206ENST00000547764 PYGLP06737 847 aa18.64■□□□□ 0.57
PRPF40B-206ENST00000547764 HLA-DPA1P20036 260 aa18.64■□□□□ 0.57
PRPF40B-206ENST00000547764 SPINK2P20155 84 aa18.64■□□□□ 0.57
PRPF40B-206ENST00000547764 ACADVLP49748 655 aa18.64■□□□□ 0.57
PRPF40B-206ENST00000547764 SHC2P98077 582 aa18.64■□□□□ 0.57
PRPF40B-206ENST00000547764 PRPSAP1Q14558 356 aa18.64■□□□□ 0.57
PRPF40B-206ENST00000547764 ELOCQ15369 112 aa18.64■□□□□ 0.57
PRPF40B-206ENST00000547764 TCEA2Q15560 299 aa18.64■□□□□ 0.57
PRPF40B-206ENST00000547764 HENMT1Q5T8I9 393 aaKnown RBP18.64■□□□□ 0.57
PRPF40B-206ENST00000547764 FAM181AQ8N9Y4 354 aa18.64■□□□□ 0.57
PRPF40B-206ENST00000547764 C1orf54Q8WWF1 131 aa18.64■□□□□ 0.57
PRPF40B-206ENST00000547764 APOLD1Q96LR9 279 aa18.64■□□□□ 0.57
PRPF40B-206ENST00000547764 FICDQ9BVA6 458 aa18.64■□□□□ 0.57
PRPF40B-206ENST00000547764 FRMD8Q9BZ67 464 aaPredicted RBP18.64■□□□□ 0.57
PRPF40B-206ENST00000547764 FRMD8P1Q9BZ68 369 aaPredicted RBP18.64■□□□□ 0.57
PRPF40B-206ENST00000547764 CYP4F12Q9HCS2 524 aa18.64■□□□□ 0.57
PRPF40B-206ENST00000547764 ANGPTL2Q9UKU9 493 aa18.64■□□□□ 0.57
PRPF40B-206ENST00000547764 YY2O15391 372 aa18.63■□□□□ 0.57
PRPF40B-206ENST00000547764 ZSCAN12O43309 604 aa18.63■□□□□ 0.57
PRPF40B-206ENST00000547764 FUCA1P04066 466 aa18.63■□□□□ 0.57
PRPF40B-206ENST00000547764 FGF1P05230 155 aa18.63■□□□□ 0.57
PRPF40B-206ENST00000547764 ANXA6P08133 673 aa18.63■□□□□ 0.57
PRPF40B-206ENST00000547764 MYF5P13349 255 aa18.63■□□□□ 0.57
PRPF40B-206ENST00000547764 ADRA1AP35348 466 aa18.63■□□□□ 0.57
PRPF40B-206ENST00000547764 POLD2P49005 469 aa18.63■□□□□ 0.57
PRPF40B-206ENST00000547764 DAB2P98082 770 aa18.63■□□□□ 0.57
PRPF40B-206ENST00000547764 OLIG2Q13516 323 aa18.63■□□□□ 0.57
PRPF40B-206ENST00000547764 OASLQ15646 514 aaKnown RBP18.63■□□□□ 0.57
PRPF40B-206ENST00000547764 ZCCHC8Q6NZY4 707 aaKnown RBP18.63■□□□□ 0.57
PRPF40B-206ENST00000547764 RANBP10Q6VN20 620 aa18.63■□□□□ 0.57
PRPF40B-206ENST00000547764 ARHGEF18Q6ZSZ5 1173 aa18.63■□□□□ 0.57
PRPF40B-206ENST00000547764 TRIM74Q86UV6 250 aa18.63■□□□□ 0.57
PRPF40B-206ENST00000547764 GPR26Q8NDV2 337 aa18.63■□□□□ 0.57
PRPF40B-206ENST00000547764 HIC2Q96JB3 615 aa18.63■□□□□ 0.57
PRPF40B-206ENST00000547764 SCNM1Q9BWG6 230 aa18.63■□□□□ 0.57
PRPF40B-206ENST00000547764 TRABDQ9H4I3 376 aa18.63■□□□□ 0.57
PRPF40B-206ENST00000547764 CNOT6Q9ULM6 557 aaKnown RBP18.63■□□□□ 0.57
PRPF40B-206ENST00000547764 SLC17A4Q9Y2C5 497 aa18.63■□□□□ 0.57
PRPF40B-206ENST00000547764 PCDHGA1Q9Y5H4 931 aa18.63■□□□□ 0.57
PRPF40B-206ENST00000547764 LY6G6EA0A0G2JKS1 128 aa18.62■□□□□ 0.57
PRPF40B-206ENST00000547764 FADS2P1A8MWK0 482 aa18.62■□□□□ 0.57
PRPF40B-206ENST00000547764 INPP4BO15327 924 aa18.62■□□□□ 0.57
PRPF40B-206ENST00000547764 RFPL3O75679 317 aa18.62■□□□□ 0.57
PRPF40B-206ENST00000547764 METTL18O95568 372 aa18.62■□□□□ 0.57
PRPF40B-206ENST00000547764 FGGP02679 453 aa18.62■□□□□ 0.57
PRPF40B-206ENST00000547764 CKMT1AP12532 417 aa18.62■□□□□ 0.57
PRPF40B-206ENST00000547764 ACP1P24666 158 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms