RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 CACNB4O00305 520 aaPredicted RBP14.42□□□□□ -0.1
DDX54-203ENST00000546869 AURKAO14965 403 aa14.42□□□□□ -0.1
DDX54-203ENST00000546869 SOD1P00441 154 aa14.42□□□□□ -0.1
DDX54-203ENST00000546869 PCCBP05166 539 aa14.42□□□□□ -0.1
DDX54-203ENST00000546869 PIRTP0C851 137 aa14.42□□□□□ -0.1
DDX54-203ENST00000546869 MYCLP1P12525 358 aaPredicted RBP14.42□□□□□ -0.1
DDX54-203ENST00000546869 NME1P15531 152 aaKnown RBP14.42□□□□□ -0.1
DDX54-203ENST00000546869 CSRP1P21291 193 aaKnown RBP14.42□□□□□ -0.1
DDX54-203ENST00000546869 EPHA8P29322 1005 aaPredicted RBP14.42□□□□□ -0.1
DDX54-203ENST00000546869 PAFAH1B1P43034 410 aa14.42□□□□□ -0.1
DDX54-203ENST00000546869 HNRNPKP61978 463 aaKnown RBP eCLIP14.42□□□□□ -0.1
DDX54-203ENST00000546869 CDK16Q00536 496 aa14.42□□□□□ -0.1
DDX54-203ENST00000546869 CDH17Q12864 832 aa14.42□□□□□ -0.1
DDX54-203ENST00000546869 EIF2B5Q13144 721 aaKnown RBP14.42□□□□□ -0.1
DDX54-203ENST00000546869 TPRG1LQ5T0D9 272 aa14.42□□□□□ -0.1
DDX54-203ENST00000546869 RFLNAQ6ZTI6 216 aa14.42□□□□□ -0.1
DDX54-203ENST00000546869 GLT6D1Q7Z4J2 308 aa14.42□□□□□ -0.1
DDX54-203ENST00000546869 PIP4P1Q86T03 277 aa14.42□□□□□ -0.1
DDX54-203ENST00000546869 OR2I1PQ8NGU4 316 aa14.42□□□□□ -0.1
DDX54-203ENST00000546869 BTN2A2Q8WVV5 523 aa14.42□□□□□ -0.1
DDX54-203ENST00000546869 SCAMP4Q969E2 229 aa14.42□□□□□ -0.1
DDX54-203ENST00000546869 FUBP1Q96AE4 644 aaKnown RBP14.42□□□□□ -0.1
DDX54-203ENST00000546869 RUNDC3BQ96NL0 473 aa14.42□□□□□ -0.1
DDX54-203ENST00000546869 ZSCAN5AQ9BUG6 496 aa14.42□□□□□ -0.1
DDX54-203ENST00000546869 WDR26Q9H7D7 661 aa14.42□□□□□ -0.1
DDX54-203ENST00000546869 PHPT1Q9NRX4 125 aaPredicted RBP14.42□□□□□ -0.1
DDX54-203ENST00000546869 SMARCAL1Q9NZC9 954 aa14.42□□□□□ -0.1
DDX54-203ENST00000546869 DGKBQ9Y6T7 804 aa14.42□□□□□ -0.1
DDX54-203ENST00000546869 C2orf81A6NN90 581 aa14.41□□□□□ -0.1
DDX54-203ENST00000546869 E7EVH7 732 aa14.41□□□□□ -0.1
DDX54-203ENST00000546869 K7ESM1 405 aa14.41□□□□□ -0.1
DDX54-203ENST00000546869 FLRT2O43155 660 aa14.41□□□□□ -0.1
DDX54-203ENST00000546869 CRTAMO95727 393 aa14.41□□□□□ -0.1
DDX54-203ENST00000546869 KRT14P02533 472 aa14.41□□□□□ -0.1
DDX54-203ENST00000546869 ZSCAN5DPP0CG00 497 aa14.41□□□□□ -0.1
DDX54-203ENST00000546869 LPOP22079 712 aaPredicted RBP14.41□□□□□ -0.1
DDX54-203ENST00000546869 PSMA3P25788 255 aa14.41□□□□□ -0.1
DDX54-203ENST00000546869 MAGEA6P43360 314 aa14.41□□□□□ -0.1
DDX54-203ENST00000546869 GPR1P46091 355 aa14.41□□□□□ -0.1
DDX54-203ENST00000546869 BLKP51451 505 aa14.41□□□□□ -0.1
DDX54-203ENST00000546869 CDK3Q00526 305 aa14.41□□□□□ -0.1
DDX54-203ENST00000546869 OLIG2Q13516 323 aa14.41□□□□□ -0.1
DDX54-203ENST00000546869 SPARCL1Q14515 664 aa14.41□□□□□ -0.1
DDX54-203ENST00000546869 PUM1Q14671 1186 aaKnown RBP eCLIP14.41□□□□□ -0.1
DDX54-203ENST00000546869 FAXCQ5TGI0 409 aa14.41□□□□□ -0.1
DDX54-203ENST00000546869 RAET1GQ6H3X3 334 aa14.41□□□□□ -0.1
DDX54-203ENST00000546869 SYT10Q6XYQ8 523 aa14.41□□□□□ -0.1
DDX54-203ENST00000546869 KANSL1Q7Z3B3 1105 aa14.41□□□□□ -0.1
DDX54-203ENST00000546869 PRUNE1Q86TP1 453 aa14.41□□□□□ -0.1
DDX54-203ENST00000546869 PELI3Q8N2H9 469 aa14.41□□□□□ -0.1
DDX54-203ENST00000546869 SDR16C5Q8N3Y7 309 aa14.41□□□□□ -0.1
DDX54-203ENST00000546869 TRAM1L1Q8N609 369 aa14.41□□□□□ -0.1
DDX54-203ENST00000546869 GPR26Q8NDV2 337 aa14.41□□□□□ -0.1
DDX54-203ENST00000546869 BLOC1S5Q8TDH9 187 aa14.41□□□□□ -0.1
DDX54-203ENST00000546869 COX14Q96I36 57 aa14.41□□□□□ -0.1
DDX54-203ENST00000546869 WDR92Q96MX6 357 aa14.41□□□□□ -0.1
DDX54-203ENST00000546869 APOL2Q9BQE5 337 aa14.41□□□□□ -0.1
DDX54-203ENST00000546869 RIOK2Q9BVS4 552 aaKnown RBP14.41□□□□□ -0.1
DDX54-203ENST00000546869 CD84Q9UIB8 345 aa14.41□□□□□ -0.1
DDX54-203ENST00000546869 OR1A2Q9Y585 309 aa14.41□□□□□ -0.1
DDX54-203ENST00000546869 CSNK1G3Q9Y6M4 447 aa14.41□□□□□ -0.1
DDX54-203ENST00000546869 H3BM21 787 aa14.4□□□□□ -0.1
DDX54-203ENST00000546869 KIF2AO00139 706 aaPredicted RBP14.4□□□□□ -0.1
DDX54-203ENST00000546869 USP12O75317 370 aa14.4□□□□□ -0.1
DDX54-203ENST00000546869 GAS8O95995 478 aa14.4□□□□□ -0.1
DDX54-203ENST00000546869 BPIP17213 487 aa14.4□□□□□ -0.1
DDX54-203ENST00000546869 TPSB2P20231 275 aa14.4□□□□□ -0.1
DDX54-203ENST00000546869 PPARDQ03181 441 aa14.4□□□□□ -0.1
DDX54-203ENST00000546869 LAMB3Q13751 1172 aa14.4□□□□□ -0.1
DDX54-203ENST00000546869 TPSAB1Q15661 275 aa14.4□□□□□ -0.1
DDX54-203ENST00000546869 UAP1L1Q3KQV9 507 aa14.4□□□□□ -0.1
DDX54-203ENST00000546869 PRAMEF14Q5SWL7 426 aa14.4□□□□□ -0.1
DDX54-203ENST00000546869 ARMC3Q5W041 872 aa14.4□□□□□ -0.1
DDX54-203ENST00000546869 KDM7AQ6ZMT4 941 aa14.4□□□□□ -0.1
DDX54-203ENST00000546869 HEATR4Q86WZ0 1026 aa14.4□□□□□ -0.1
DDX54-203ENST00000546869 OR56A4Q8NGH8 313 aa14.4□□□□□ -0.1
DDX54-203ENST00000546869 SCARF2Q96GP6 870 aaPredicted RBP14.4□□□□□ -0.1
DDX54-203ENST00000546869 HIC2Q96JB3 615 aa14.4□□□□□ -0.1
DDX54-203ENST00000546869 AGAP2Q99490 1192 aa14.4□□□□□ -0.1
DDX54-203ENST00000546869 LGR4Q9BXB1 951 aa14.4□□□□□ -0.1
DDX54-203ENST00000546869 CASS4Q9NQ75 786 aa14.4□□□□□ -0.1
DDX54-203ENST00000546869 KLF15Q9UIH9 416 aa14.4□□□□□ -0.1
DDX54-203ENST00000546869 RIMKLBQ9ULI2 386 aa14.4□□□□□ -0.1
DDX54-203ENST00000546869 CNOT6Q9ULM6 557 aaKnown RBP14.4□□□□□ -0.1
DDX54-203ENST00000546869 SLC17A4Q9Y2C5 497 aa14.4□□□□□ -0.1
DDX54-203ENST00000546869 PKP3Q9Y446 797 aa14.4□□□□□ -0.1
DDX54-203ENST00000546869 LRRK1Q38SD2 2015 aa14.4□□□□□ -0.1
DDX54-203ENST00000546869 NEMP2A6NFY4 417 aa14.39□□□□□ -0.11
DDX54-203ENST00000546869 TMEM202A6NGA9 273 aa14.39□□□□□ -0.11
DDX54-203ENST00000546869 GOLGA8CPA6NN73 597 aa14.39□□□□□ -0.11
DDX54-203ENST00000546869 STX7O15400 261 aaKnown RBP14.39□□□□□ -0.11
DDX54-203ENST00000546869 LDB2O43679 373 aa14.39□□□□□ -0.11
DDX54-203ENST00000546869 CBFA2T3O75081 653 aa14.39□□□□□ -0.11
DDX54-203ENST00000546869 PIAS2O75928 621 aa14.39□□□□□ -0.11
DDX54-203ENST00000546869 ECEL1O95672 775 aa14.39□□□□□ -0.11
DDX54-203ENST00000546869 APRTP07741 180 aa14.39□□□□□ -0.11
DDX54-203ENST00000546869 DGKAP23743 735 aa14.39□□□□□ -0.11
DDX54-203ENST00000546869 SPAM1P38567 509 aa14.39□□□□□ -0.11
DDX54-203ENST00000546869 HADHAP40939 763 aa14.39□□□□□ -0.11
DDX54-203ENST00000546869 LMAN1P49257 510 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms