RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 TPRG1LQ5T0D9 272 aa16.75■□□□□ 0.27
CCDC38-203ENST00000546803 HENMT1Q5T8I9 393 aaKnown RBP16.75■□□□□ 0.27
CCDC38-203ENST00000546803 ADAMTSL4Q6UY14 1074 aa16.75■□□□□ 0.27
CCDC38-203ENST00000546803 KDM7AQ6ZMT4 941 aa16.75■□□□□ 0.27
CCDC38-203ENST00000546803 DBX2Q6ZNG2 339 aa16.75■□□□□ 0.27
CCDC38-203ENST00000546803 FUBP1Q96AE4 644 aaKnown RBP16.75■□□□□ 0.27
CCDC38-203ENST00000546803 WDR92Q96MX6 357 aa16.75■□□□□ 0.27
CCDC38-203ENST00000546803 RUNDC3BQ96NL0 473 aa16.75■□□□□ 0.27
CCDC38-203ENST00000546803 C19orf43Q9BQ61 176 aa16.75■□□□□ 0.27
CCDC38-203ENST00000546803 EIF2B3Q9NR50 452 aaKnown RBP16.75■□□□□ 0.27
CCDC38-203ENST00000546803 DNAJC28Q9NX36 388 aa16.75■□□□□ 0.27
CCDC38-203ENST00000546803 DLL3Q9NYJ7 618 aa16.75■□□□□ 0.27
CCDC38-203ENST00000546803 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.75■□□□□ 0.27
CCDC38-203ENST00000546803 IL17CQ9P0M4 197 aa16.75■□□□□ 0.27
CCDC38-203ENST00000546803 PKP3Q9Y446 797 aa16.75■□□□□ 0.27
CCDC38-203ENST00000546803 PCDH15Q96QU1 1955 aa16.75■□□□□ 0.27
CCDC38-203ENST00000546803 VPS13AQ96RL7 3174 aa16.75■□□□□ 0.27
CCDC38-203ENST00000546803 TRPM6Q9BX84 2022 aa16.74■□□□□ 0.27
CCDC38-203ENST00000546803 C2orf81A6NN90 581 aa16.74■□□□□ 0.27
CCDC38-203ENST00000546803 CCDC188H7C350 402 aa16.74■□□□□ 0.27
CCDC38-203ENST00000546803 CRTAMO95727 393 aa16.74■□□□□ 0.27
CCDC38-203ENST00000546803 KRT14P02533 472 aa16.74■□□□□ 0.27
CCDC38-203ENST00000546803 SLC4A1P02730 911 aa16.74■□□□□ 0.27
CCDC38-203ENST00000546803 APRTP07741 180 aa16.74■□□□□ 0.27
CCDC38-203ENST00000546803 MYCLP1P12525 358 aaPredicted RBP16.74■□□□□ 0.27
CCDC38-203ENST00000546803 CD59P13987 128 aa16.74■□□□□ 0.27
CCDC38-203ENST00000546803 NME1P15531 152 aaKnown RBP16.74■□□□□ 0.27
CCDC38-203ENST00000546803 BPIP17213 487 aa16.74■□□□□ 0.27
CCDC38-203ENST00000546803 LPOP22079 712 aaPredicted RBP16.74■□□□□ 0.27
CCDC38-203ENST00000546803 EPHA8P29322 1005 aaPredicted RBP16.74■□□□□ 0.27
CCDC38-203ENST00000546803 BLKP51451 505 aa16.74■□□□□ 0.27
CCDC38-203ENST00000546803 BASP1P80723 227 aaKnown RBP16.74■□□□□ 0.27
CCDC38-203ENST00000546803 CDK3Q00526 305 aa16.74■□□□□ 0.27
CCDC38-203ENST00000546803 CDK16Q00536 496 aa16.74■□□□□ 0.27
CCDC38-203ENST00000546803 EIF2B5Q13144 721 aaKnown RBP16.74■□□□□ 0.27
CCDC38-203ENST00000546803 MSLNQ13421 630 aaPredicted RBP16.74■□□□□ 0.27
CCDC38-203ENST00000546803 PUM1Q14671 1186 aaKnown RBP eCLIP16.74■□□□□ 0.27
CCDC38-203ENST00000546803 INAVAQ3KP66 663 aa16.74■□□□□ 0.27
CCDC38-203ENST00000546803 PDPK2PQ6A1A2 396 aa16.74■□□□□ 0.27
CCDC38-203ENST00000546803 ENPP7Q6UWV6 458 aa16.74■□□□□ 0.27
CCDC38-203ENST00000546803 HEATR4Q86WZ0 1026 aa16.74■□□□□ 0.27
CCDC38-203ENST00000546803 PELI3Q8N2H9 469 aa16.74■□□□□ 0.27
CCDC38-203ENST00000546803 DTX3LQ8TDB6 740 aa16.74■□□□□ 0.27
CCDC38-203ENST00000546803 SAP25Q8TEE9 199 aa16.74■□□□□ 0.27
CCDC38-203ENST00000546803 BTN2A2Q8WVV5 523 aa16.74■□□□□ 0.27
CCDC38-203ENST00000546803 TBATAQ96M53 351 aa16.74■□□□□ 0.27
CCDC38-203ENST00000546803 PLEKHG4BQ96PX9 1271 aa16.74■□□□□ 0.27
CCDC38-203ENST00000546803 ZSCAN5AQ9BUG6 496 aa16.74■□□□□ 0.27
CCDC38-203ENST00000546803 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.74■□□□□ 0.27
CCDC38-203ENST00000546803 MYO15AQ9UKN7 3530 aa16.74■□□□□ 0.27
CCDC38-203ENST00000546803 GVINP1Q7Z2Y8 2422 aa16.74■□□□□ 0.27
CCDC38-203ENST00000546803 AP3B1O00203 1094 aa16.73■□□□□ 0.27
CCDC38-203ENST00000546803 STX7O15400 261 aaKnown RBP16.73■□□□□ 0.27
CCDC38-203ENST00000546803 FLRT2O43155 660 aa16.73■□□□□ 0.27
CCDC38-203ENST00000546803 ECEL1O95672 775 aa16.73■□□□□ 0.27
CCDC38-203ENST00000546803 SOD1P00441 154 aa16.73■□□□□ 0.27
CCDC38-203ENST00000546803 PPARDQ03181 441 aa16.73■□□□□ 0.27
CCDC38-203ENST00000546803 CDH17Q12864 832 aa16.73■□□□□ 0.27
CCDC38-203ENST00000546803 PPP1R21Q6ZMI0 780 aa16.73■□□□□ 0.27
CCDC38-203ENST00000546803 TRAM1L1Q8N609 369 aa16.73■□□□□ 0.27
CCDC38-203ENST00000546803 GPR26Q8NDV2 337 aa16.73■□□□□ 0.27
CCDC38-203ENST00000546803 OR56A4Q8NGH8 313 aa16.73■□□□□ 0.27
CCDC38-203ENST00000546803 SLCO2A1Q92959 643 aa16.73■□□□□ 0.27
CCDC38-203ENST00000546803 HIC2Q96JB3 615 aa16.73■□□□□ 0.27
CCDC38-203ENST00000546803 C16orf45Q96MC5 204 aaPredicted RBP16.73■□□□□ 0.27
CCDC38-203ENST00000546803 KLQ9UEF7 1012 aa16.73■□□□□ 0.27
CCDC38-203ENST00000546803 PCYOX1Q9UHG3 505 aa16.73■□□□□ 0.27
CCDC38-203ENST00000546803 NEU2Q9Y3R4 380 aa16.73■□□□□ 0.27
CCDC38-203ENST00000546803 KIF2AO00139 706 aaPredicted RBP16.72■□□□□ 0.27
CCDC38-203ENST00000546803 PIAS2O75928 621 aa16.72■□□□□ 0.27
CCDC38-203ENST00000546803 RASGRP1O95267 797 aa16.72■□□□□ 0.27
CCDC38-203ENST00000546803 JUNDP17535 347 aa16.72■□□□□ 0.27
CCDC38-203ENST00000546803 CSRP1P21291 193 aaKnown RBP16.72■□□□□ 0.27
CCDC38-203ENST00000546803 GRK6P43250 576 aa16.72■□□□□ 0.27
CCDC38-203ENST00000546803 SRP54P61011 504 aaKnown RBP16.72■□□□□ 0.27
CCDC38-203ENST00000546803 IL9RQ01113 521 aa16.72■□□□□ 0.27
CCDC38-203ENST00000546803 GPS1Q13098 491 aa16.72■□□□□ 0.27
CCDC38-203ENST00000546803 TRIP13Q15645 432 aaPredicted RBP16.72■□□□□ 0.27
CCDC38-203ENST00000546803 ALG11Q2TAA5 492 aa16.72■□□□□ 0.27
CCDC38-203ENST00000546803 ALS2CLQ60I27 953 aa16.72■□□□□ 0.27
CCDC38-203ENST00000546803 PIP4P1Q86T03 277 aa16.72■□□□□ 0.27
CCDC38-203ENST00000546803 PHACTR4Q8IZ21 702 aa16.72■□□□□ 0.27
CCDC38-203ENST00000546803 DNAAF3Q8N9W5 541 aa16.72■□□□□ 0.27
CCDC38-203ENST00000546803 AGAP2Q99490 1192 aa16.72■□□□□ 0.27
CCDC38-203ENST00000546803 LGR4Q9BXB1 951 aa16.72■□□□□ 0.27
CCDC38-203ENST00000546803 SPATA16Q9BXB7 569 aa16.72■□□□□ 0.27
CCDC38-203ENST00000546803 SLC13A1Q9BZW2 595 aa16.72■□□□□ 0.27
CCDC38-203ENST00000546803 DDX47Q9H0S4 455 aaKnown RBP16.72■□□□□ 0.27
CCDC38-203ENST00000546803 SLC32A1Q9H598 525 aa16.72■□□□□ 0.27
CCDC38-203ENST00000546803 BPIFA1Q9NP55 256 aa16.72■□□□□ 0.27
CCDC38-203ENST00000546803 CASS4Q9NQ75 786 aa16.72■□□□□ 0.27
CCDC38-203ENST00000546803 SPASTQ9UBP0 616 aa16.72■□□□□ 0.27
CCDC38-203ENST00000546803 ARL5AQ9Y689 179 aa16.72■□□□□ 0.27
CCDC38-203ENST00000546803 DGKBQ9Y6T7 804 aa16.72■□□□□ 0.27
CCDC38-203ENST00000546803 PLXNA2O75051 1894 aa16.71■□□□□ 0.27
CCDC38-203ENST00000546803 NEMP2A6NFY4 417 aa16.71■□□□□ 0.27
CCDC38-203ENST00000546803 TMEM202A6NGA9 273 aa16.71■□□□□ 0.27
CCDC38-203ENST00000546803 TPSB2P20231 275 aa16.71■□□□□ 0.27
CCDC38-203ENST00000546803 SPAM1P38567 509 aa16.71■□□□□ 0.27
CCDC38-203ENST00000546803 MAGEA6P43360 314 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms