RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 SOD1P00441 154 aa20.41■□□□□ 0.86
HMGA2-211ENST00000545998 TSHRP16473 764 aa20.41■□□□□ 0.86
HMGA2-211ENST00000545998 BPIP17213 487 aa20.41■□□□□ 0.86
HMGA2-211ENST00000545998 TPH1P17752 444 aa20.41■□□□□ 0.86
HMGA2-211ENST00000545998 TEAD1P28347 426 aa20.41■□□□□ 0.86
HMGA2-211ENST00000545998 DCDC1P59894 354 aa20.41■□□□□ 0.86
HMGA2-211ENST00000545998 CDK16Q00536 496 aa20.41■□□□□ 0.86
HMGA2-211ENST00000545998 DR1Q01658 176 aa20.41■□□□□ 0.86
HMGA2-211ENST00000545998 CDH17Q12864 832 aa20.41■□□□□ 0.86
HMGA2-211ENST00000545998 ZNF423Q2M1K9 1284 aa20.41■□□□□ 0.86
HMGA2-211ENST00000545998 HLA-BQ31612 363 aa20.41■□□□□ 0.86
HMGA2-211ENST00000545998 HENMT1Q5T8I9 393 aaKnown RBP20.41■□□□□ 0.86
HMGA2-211ENST00000545998 RAET1GQ6H3X3 334 aa20.41■□□□□ 0.86
HMGA2-211ENST00000545998 PPP1R21Q6ZMI0 780 aa20.41■□□□□ 0.86
HMGA2-211ENST00000545998 GPR26Q8NDV2 337 aa20.41■□□□□ 0.86
HMGA2-211ENST00000545998 OR2I1PQ8NGU4 316 aa20.41■□□□□ 0.86
HMGA2-211ENST00000545998 RIOK2Q9BVS4 552 aaKnown RBP20.41■□□□□ 0.86
HMGA2-211ENST00000545998 CDH19Q9H159 772 aa20.41■□□□□ 0.86
HMGA2-211ENST00000545998 FAM83DQ9H4H8 585 aa20.41■□□□□ 0.86
HMGA2-211ENST00000545998 ERVMER34-1Q9H9K5 563 aa20.41■□□□□ 0.86
HMGA2-211ENST00000545998 RAD18Q9NS91 495 aa20.41■□□□□ 0.86
HMGA2-211ENST00000545998 SPTY2D1-AS1A0A0U1RR47 76 aa20.4■□□□□ 0.86
HMGA2-211ENST00000545998 TCRBV7S3A2A0A539 114 aa20.4■□□□□ 0.86
HMGA2-211ENST00000545998 PDE1CQ14123 709 aaPredicted RBP20.4■□□□□ 0.86
HMGA2-211ENST00000545998 SYDE1Q6ZW31 735 aaPredicted RBP20.4■□□□□ 0.86
HMGA2-211ENST00000545998 MINDY1Q8N5J2 469 aa20.4■□□□□ 0.86
HMGA2-211ENST00000545998 DNAAF3Q8N9W5 541 aa20.4■□□□□ 0.86
HMGA2-211ENST00000545998 KIF18AQ8NI77 898 aa20.4■□□□□ 0.86
HMGA2-211ENST00000545998 CPT1BQ92523 772 aa20.4■□□□□ 0.86
HMGA2-211ENST00000545998 FUBP1Q96AE4 644 aaKnown RBP20.4■□□□□ 0.86
HMGA2-211ENST00000545998 KRT12Q99456 494 aa20.4■□□□□ 0.86
HMGA2-211ENST00000545998 AGAP2Q99490 1192 aa20.4■□□□□ 0.86
HMGA2-211ENST00000545998 GAREM1Q9H706 876 aa20.4■□□□□ 0.86
HMGA2-211ENST00000545998 IL21RQ9HBE5 538 aa20.4■□□□□ 0.86
HMGA2-211ENST00000545998 BPIFA1Q9NP55 256 aa20.4■□□□□ 0.86
HMGA2-211ENST00000545998 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.4■□□□□ 0.86
HMGA2-211ENST00000545998 C2orf81A6NN90 581 aa20.39■□□□□ 0.85
HMGA2-211ENST00000545998 BUD23O43709 281 aaKnown RBP20.39■□□□□ 0.85
HMGA2-211ENST00000545998 CRTAMO95727 393 aa20.39■□□□□ 0.85
HMGA2-211ENST00000545998 CER1O95813 267 aa20.39■□□□□ 0.85
HMGA2-211ENST00000545998 HOXC4P09017 264 aaPredicted RBP20.39■□□□□ 0.85
HMGA2-211ENST00000545998 LPOP22079 712 aaPredicted RBP20.39■□□□□ 0.85
HMGA2-211ENST00000545998 ATXN3P54252 364 aaPredicted RBP20.39■□□□□ 0.85
HMGA2-211ENST00000545998 TERF1P54274 439 aa20.39■□□□□ 0.85
HMGA2-211ENST00000545998 DHX34Q14147 1143 aaKnown RBP20.39■□□□□ 0.85
HMGA2-211ENST00000545998 FZD2Q14332 565 aa20.39■□□□□ 0.85
HMGA2-211ENST00000545998 ANKRD22Q5VYY1 191 aa20.39■□□□□ 0.85
HMGA2-211ENST00000545998 ADAMTSL4Q6UY14 1074 aa20.39■□□□□ 0.85
HMGA2-211ENST00000545998 JAMLQ86YT9 394 aa20.39■□□□□ 0.85
HMGA2-211ENST00000545998 PLEKHG4BQ96PX9 1271 aa20.39■□□□□ 0.85
HMGA2-211ENST00000545998 ELF4Q99607 663 aaPredicted RBP20.39■□□□□ 0.85
HMGA2-211ENST00000545998 TEX101Q9BY14 249 aa20.39■□□□□ 0.85
HMGA2-211ENST00000545998 WDR26Q9H7D7 661 aa20.39■□□□□ 0.85
HMGA2-211ENST00000545998 TMEM9BQ9NQ34 198 aa20.39■□□□□ 0.85
HMGA2-211ENST00000545998 KCTD3Q9Y597 815 aa20.39■□□□□ 0.85
HMGA2-211ENST00000545998 LRP4O75096 1905 aa20.39■□□□□ 0.85
HMGA2-211ENST00000545998 DCHS1Q96JQ0 3298 aa20.38■□□□□ 0.85
HMGA2-211ENST00000545998 LDB2O43679 373 aa20.38■□□□□ 0.85
HMGA2-211ENST00000545998 PPFIA2O75334 1257 aa20.38■□□□□ 0.85
HMGA2-211ENST00000545998 PYGLP06737 847 aa20.38■□□□□ 0.85
HMGA2-211ENST00000545998 GPR1P46091 355 aa20.38■□□□□ 0.85
HMGA2-211ENST00000545998 THOP1P52888 689 aa20.38■□□□□ 0.85
HMGA2-211ENST00000545998 KIAA1024LP59773 190 aa20.38■□□□□ 0.85
HMGA2-211ENST00000545998 PDE1BQ01064 536 aa20.38■□□□□ 0.85
HMGA2-211ENST00000545998 CKAP4Q07065 602 aaKnown RBP20.38■□□□□ 0.85
HMGA2-211ENST00000545998 C2orf54Q08AI8 447 aa20.38■□□□□ 0.85
HMGA2-211ENST00000545998 PTK2BQ14289 1009 aa20.38■□□□□ 0.85
HMGA2-211ENST00000545998 PTPRCAPQ14761 206 aa20.38■□□□□ 0.85
HMGA2-211ENST00000545998 POU6F1Q14863 301 aa20.38■□□□□ 0.85
HMGA2-211ENST00000545998 NFATC4Q14934 902 aa20.38■□□□□ 0.85
HMGA2-211ENST00000545998 WHAMMP3Q1A5X7 153 aa20.38■□□□□ 0.85
HMGA2-211ENST00000545998 PRAMEF14Q5SWL7 426 aa20.38■□□□□ 0.85
HMGA2-211ENST00000545998 CERCAMQ5T4B2 595 aa20.38■□□□□ 0.85
HMGA2-211ENST00000545998 MACC1Q6ZN28 852 aa20.38■□□□□ 0.85
HMGA2-211ENST00000545998 HEATR4Q86WZ0 1026 aa20.38■□□□□ 0.85
HMGA2-211ENST00000545998 LGR4Q9BXB1 951 aa20.38■□□□□ 0.85
HMGA2-211ENST00000545998 DNAAF2Q9NVR5 837 aaKnown RBP20.38■□□□□ 0.85
HMGA2-211ENST00000545998 ASIC3Q9UHC3 531 aa20.38■□□□□ 0.85
HMGA2-211ENST00000545998 FNDC3AQ9Y2H6 1198 aaKnown RBP20.38■□□□□ 0.85
HMGA2-211ENST00000545998 PKP3Q9Y446 797 aa20.38■□□□□ 0.85
HMGA2-211ENST00000545998 MRFAP1Q9Y605 127 aa20.38■□□□□ 0.85
HMGA2-211ENST00000545998 TTI1O43156 1089 aa20.38■□□□□ 0.85
HMGA2-211ENST00000545998 DFNA5O60443 496 aa20.38■□□□□ 0.85
HMGA2-211ENST00000545998 ADCY8P40145 1251 aa20.38■□□□□ 0.85
HMGA2-211ENST00000545998 ZNF140P52738 457 aaPredicted RBP20.38■□□□□ 0.85
HMGA2-211ENST00000545998 TUBB2AQ13885 445 aa20.38■□□□□ 0.85
HMGA2-211ENST00000545998 ALS2CLQ60I27 953 aa20.38■□□□□ 0.85
HMGA2-211ENST00000545998 ZNF534Q76KX8 674 aa20.38■□□□□ 0.85
HMGA2-211ENST00000545998 OXR1Q8N573 874 aa20.38■□□□□ 0.85
HMGA2-211ENST00000545998 C19orf43Q9BQ61 176 aa20.38■□□□□ 0.85
HMGA2-211ENST00000545998 TUBB2BQ9BVA1 445 aa20.38■□□□□ 0.85
HMGA2-211ENST00000545998 IL26Q9NPH9 171 aa20.38■□□□□ 0.85
HMGA2-211ENST00000545998 CACNB4O00305 520 aaPredicted RBP20.37■□□□□ 0.85
HMGA2-211ENST00000545998 STX7O15400 261 aaKnown RBP20.37■□□□□ 0.85
HMGA2-211ENST00000545998 TMEM63AO94886 807 aa20.37■□□□□ 0.85
HMGA2-211ENST00000545998 IVDP26440 423 aa20.37■□□□□ 0.85
HMGA2-211ENST00000545998 HTR1BP28222 390 aa20.37■□□□□ 0.85
HMGA2-211ENST00000545998 CDK3Q00526 305 aa20.37■□□□□ 0.85
HMGA2-211ENST00000545998 EIF2B5Q13144 721 aaKnown RBP20.37■□□□□ 0.85
HMGA2-211ENST00000545998 SHBQ15464 509 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms