RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 THNSL1Q8IYQ7 743 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 C10orf90Q96M02 699 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 KLHL32Q96NJ5 620 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 ZNF184Q99676 751 aaPredicted RBP8.89□□□□□ -0.99
VPS13D-212ENST00000543766 CDC6Q99741 560 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 ZNF416Q9BWM5 594 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 C6orf62Q9GZU0 229 aaPredicted RBP8.89□□□□□ -0.99
VPS13D-212ENST00000543766 SLC26A1Q9H2B4 701 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 DDX43Q9NXZ2 648 aaKnown RBP8.89□□□□□ -0.99
VPS13D-212ENST00000543766 AK5Q9Y6K8 562 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 ERVV-1B6SEH8 477 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 L7N2F9 121 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 CYTIPO60759 359 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 CDK1P06493 297 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 NUDT7P0C024 238 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 CCDC130P13994 396 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 NDUFB7P17568 137 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 ATP6V1B2P21281 511 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 NCOA4Q13772 614 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 NTRK3Q16288 839 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 DCAF8Q5TAQ9 597 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 ASPGQ86U10 573 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 OFCC1Q8IZS5 231 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 EFCAB3Q8N7B9 438 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 FBXO17Q96EF6 278 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 MLXIPQ9HAP2 919 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 TAB2Q9NYJ8 693 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 LRWD1Q9UFC0 647 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 LIMD1Q9UGP4 676 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 STAP1Q9ULZ2 295 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 RPL26L1Q9UNX3 145 aaKnown RBP8.89□□□□□ -0.99
VPS13D-212ENST00000543766 KIF13BQ9NQT8 1826 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 H0YIN7 160 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 WNT7AO00755 349 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 CLDN4O14493 209 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 GABRDO14764 452 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 RAD51CO43502 376 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 TIE1P35590 1138 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 RNASE9P60153 205 aaKnown RBP8.88□□□□□ -0.99
VPS13D-212ENST00000543766 CDR2Q01850 454 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 PLCL1Q15111 1095 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 ASTE1Q2TB18 679 aaPredicted RBP8.88□□□□□ -0.99
VPS13D-212ENST00000543766 ZNF618Q5T7W0 954 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 ZNF813Q6ZN06 617 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 TRMT10CQ7L0Y3 403 aaKnown RBP8.88□□□□□ -0.99
VPS13D-212ENST00000543766 CLPTM1LQ96KA5 538 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 MBOAT7Q96N66 472 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 EPB41L1Q9H4G0 881 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 GDAP2Q9NXN4 497 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 PCDHGA9Q9Y5G4 932 aaKnown RBP8.88□□□□□ -0.99
VPS13D-212ENST00000543766 KLK4Q9Y5K2 254 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 ZNF879B4DU55 563 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 AURKAO14965 403 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 GPR37O15354 613 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 BCAS1O75363 584 aaPredicted RBP8.88□□□□□ -0.99
VPS13D-212ENST00000543766 SHBGP04278 402 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 PGK2P07205 417 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 HSPD1P10809 573 aaKnown RBP8.88□□□□□ -0.99
VPS13D-212ENST00000543766 IL6STP40189 918 aaPredicted RBP8.88□□□□□ -0.99
VPS13D-212ENST00000543766 DGKQP52824 942 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 DCAF7P61962 342 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 DLG4P78352 724 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 TGM3Q08188 693 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 DPYSL2Q16555 572 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 DGKDQ16760 1214 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 FAM26FQ5R3K3 315 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 RNF219Q5W0B1 726 aaPredicted RBP8.88□□□□□ -0.99
VPS13D-212ENST00000543766 USP49Q70CQ1 688 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 PGM2Q96G03 612 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 ZBED3Q96IU2 234 aaPredicted RBP8.88□□□□□ -0.99
VPS13D-212ENST00000543766 ELF4Q99607 663 aaPredicted RBP8.88□□□□□ -0.99
VPS13D-212ENST00000543766 RNF32Q9H0A6 362 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 HMX1Q9NP08 348 aaPredicted RBP8.88□□□□□ -0.99
VPS13D-212ENST00000543766 NOCTQ9UK39 431 aaKnown RBP8.88□□□□□ -0.99
VPS13D-212ENST00000543766 NPFFR2Q9Y5X5 522 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 V9GY48 417 aaPredicted RBP8.88□□□□□ -0.99
VPS13D-212ENST00000543766 FAM149AA5PLN7 773 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 FAM25AB3EWG3 89 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 FAM25CB3EWG5 89 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 FAM25GB3EWG6 89 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 GSTA4O15217 222 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 MOCS3O95396 460 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 KLK3P07288 261 aaPredicted RBP8.88□□□□□ -0.99
VPS13D-212ENST00000543766 PKMP14618 531 aaKnown RBP8.88□□□□□ -0.99
VPS13D-212ENST00000543766 KRT15P19012 456 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 ZNF252P-AS1Q0IIN9 211 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 PIGHQ14442 188 aaPredicted RBP8.88□□□□□ -0.99
VPS13D-212ENST00000543766 PON3Q15166 354 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 TCEA2Q15560 299 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 GSTA3Q16772 222 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 DBX2Q6ZNG2 339 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 LRRC74BQ6ZQY2 392 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 PIWIL4Q7Z3Z4 852 aaKnown RBP8.88□□□□□ -0.99
VPS13D-212ENST00000543766 ERO1BQ86YB8 467 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 EID3Q8N140 333 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 TERB1Q8NA31 727 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 CCDC74AQ96AQ1 378 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 MS4A14Q96JA4 679 aa8.88□□□□□ -0.99
VPS13D-212ENST00000543766 POLR3FQ9H1D9 316 aaPredicted RBP8.88□□□□□ -0.99
VPS13D-212ENST00000543766 LRMDAQ9H2I8 198 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms