RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 PPARGP37231 505 aaPredicted RBP11.51□□□□□ -0.57
COPS7A-217ENST00000543537 CSKP41240 450 aa11.51□□□□□ -0.57
COPS7A-217ENST00000543537 ATP1A2P50993 1020 aa11.51□□□□□ -0.57
COPS7A-217ENST00000543537 KPNA2P52292 529 aaKnown RBP11.51□□□□□ -0.57
COPS7A-217ENST00000543537 SLC14A1Q13336 389 aa11.51□□□□□ -0.57
COPS7A-217ENST00000543537 THOC5Q13769 683 aaKnown RBP11.51□□□□□ -0.57
COPS7A-217ENST00000543537 HNRNPA1L2Q32P51 320 aaKnown RBP11.51□□□□□ -0.57
COPS7A-217ENST00000543537 FNDC3BQ53EP0 1204 aaKnown RBP11.51□□□□□ -0.57
COPS7A-217ENST00000543537 FSCBQ5H9T9 825 aa11.51□□□□□ -0.57
COPS7A-217ENST00000543537 N4BP2L1Q5TBK1 243 aaPredicted RBP11.51□□□□□ -0.57
COPS7A-217ENST00000543537 GKAP1Q5VSY0 366 aaPredicted RBP11.51□□□□□ -0.57
COPS7A-217ENST00000543537 HHATQ5VTY9 493 aa11.51□□□□□ -0.57
COPS7A-217ENST00000543537 RNF219Q5W0B1 726 aaPredicted RBP11.51□□□□□ -0.57
COPS7A-217ENST00000543537 KDELC1Q6UW63 502 aa11.51□□□□□ -0.57
COPS7A-217ENST00000543537 KYAT3Q6YP21 454 aaKnown RBP11.51□□□□□ -0.57
COPS7A-217ENST00000543537 ZNF771Q7L3S4 317 aaPredicted RBP11.51□□□□□ -0.57
COPS7A-217ENST00000543537 CPLX4Q7Z7G2 160 aa11.51□□□□□ -0.57
COPS7A-217ENST00000543537 IGDCC3Q8IVU1 814 aa11.51□□□□□ -0.57
COPS7A-217ENST00000543537 HOMEZQ8IX15 550 aa11.51□□□□□ -0.57
COPS7A-217ENST00000543537 IPMKQ8NFU5 416 aa11.51□□□□□ -0.57
COPS7A-217ENST00000543537 BCAS4Q8TDM0 211 aa11.51□□□□□ -0.57
COPS7A-217ENST00000543537 OXNAD1Q96HP4 312 aaPredicted RBP11.51□□□□□ -0.57
COPS7A-217ENST00000543537 TSNARE1Q96NA8 513 aa11.51□□□□□ -0.57
COPS7A-217ENST00000543537 FEM1AQ9BSK4 669 aa11.51□□□□□ -0.57
COPS7A-217ENST00000543537 RSPH9Q9H1X1 276 aaPredicted RBP11.51□□□□□ -0.57
COPS7A-217ENST00000543537 NDFIP2Q9NV92 336 aa11.51□□□□□ -0.57
COPS7A-217ENST00000543537 TBK1Q9UHD2 729 aa11.51□□□□□ -0.57
COPS7A-217ENST00000543537 TCAF1Q9Y4C2 921 aa11.51□□□□□ -0.57
COPS7A-217ENST00000543537 A0A1B0GTW7 788 aa11.5□□□□□ -0.57
COPS7A-217ENST00000543537 CCDC189A1A4V9 331 aa11.5□□□□□ -0.57
COPS7A-217ENST00000543537 GOLGA8CPA6NN73 597 aa11.5□□□□□ -0.57
COPS7A-217ENST00000543537 C2orf81A6NN90 581 aa11.5□□□□□ -0.57
COPS7A-217ENST00000543537 J3KR12 359 aa11.5□□□□□ -0.57
COPS7A-217ENST00000543537 EBAG9O00559 213 aa11.5□□□□□ -0.57
COPS7A-217ENST00000543537 COPEO14579 308 aa11.5□□□□□ -0.57
COPS7A-217ENST00000543537 INSIG1O15503 277 aa11.5□□□□□ -0.57
COPS7A-217ENST00000543537 SNUPNO95149 360 aaKnown RBP11.5□□□□□ -0.57
COPS7A-217ENST00000543537 ACADMP11310 421 aa11.5□□□□□ -0.57
COPS7A-217ENST00000543537 GNSP15586 552 aa11.5□□□□□ -0.57
COPS7A-217ENST00000543537 GCAP28676 217 aa11.5□□□□□ -0.57
COPS7A-217ENST00000543537 CRHR1P34998 444 aa11.5□□□□□ -0.57
COPS7A-217ENST00000543537 NNMTP40261 264 aa11.5□□□□□ -0.57
COPS7A-217ENST00000543537 RPS14P62263 151 aaKnown RBP11.5□□□□□ -0.57
COPS7A-217ENST00000543537 SLC10A7Q0GE19 358 aa11.5□□□□□ -0.57
COPS7A-217ENST00000543537 SLC1A5Q15758 541 aa11.5□□□□□ -0.57
COPS7A-217ENST00000543537 PLEKHG6Q3KR16 790 aa11.5□□□□□ -0.57
COPS7A-217ENST00000543537 PITRM1Q5JRX3 1037 aa11.5□□□□□ -0.57
COPS7A-217ENST00000543537 HP1BP3Q5SSJ5 553 aaPredicted RBP11.5□□□□□ -0.57
COPS7A-217ENST00000543537 USP30Q70CQ3 517 aa11.5□□□□□ -0.57
COPS7A-217ENST00000543537 SDCCAG8Q86SQ7 713 aaPredicted RBP11.5□□□□□ -0.57
COPS7A-217ENST00000543537 CNTN4Q8IWV2 1026 aa11.5□□□□□ -0.57
COPS7A-217ENST00000543537 ARRDC2Q8TBH0 407 aa11.5□□□□□ -0.57
COPS7A-217ENST00000543537 CKAP2Q8WWK9 683 aa11.5□□□□□ -0.57
COPS7A-217ENST00000543537 ZNF669Q96BR6 464 aaPredicted RBP11.5□□□□□ -0.57
COPS7A-217ENST00000543537 MRGPRX2Q96LB1 330 aa11.5□□□□□ -0.57
COPS7A-217ENST00000543537 TCF12Q99081 682 aa11.5□□□□□ -0.57
COPS7A-217ENST00000543537 SEMA3CQ99985 751 aa11.5□□□□□ -0.57
COPS7A-217ENST00000543537 FICDQ9BVA6 458 aa11.5□□□□□ -0.57
COPS7A-217ENST00000543537 GPR174Q9BXC1 333 aa11.5□□□□□ -0.57
COPS7A-217ENST00000543537 CEP44Q9C0F1 390 aa11.5□□□□□ -0.57
COPS7A-217ENST00000543537 SGK2Q9HBY8 427 aa11.5□□□□□ -0.57
COPS7A-217ENST00000543537 SCUBE2Q9NQ36 999 aa11.5□□□□□ -0.57
COPS7A-217ENST00000543537 SYBUQ9NX95 663 aa11.5□□□□□ -0.57
COPS7A-217ENST00000543537 VPS28Q9UK41 221 aa11.5□□□□□ -0.57
COPS7A-217ENST00000543537 WASF3Q9UPY6 502 aa11.5□□□□□ -0.57
COPS7A-217ENST00000543537 ANKRD6Q9Y2G4 727 aa11.5□□□□□ -0.57
COPS7A-217ENST00000543537 ATXN2Q99700 1313 aaKnown RBP11.5□□□□□ -0.57
COPS7A-217ENST00000543537 CEP295Q9C0D2 2601 aa11.5□□□□□ -0.57
COPS7A-217ENST00000543537 NUMA1Q14980 2115 aa11.5□□□□□ -0.57
COPS7A-217ENST00000543537 CACNA1BQ00975 2339 aa11.49□□□□□ -0.57
COPS7A-217ENST00000543537 CBX4O00257 560 aa11.49□□□□□ -0.57
COPS7A-217ENST00000543537 BIRC5O15392 142 aa11.49□□□□□ -0.57
COPS7A-217ENST00000543537 ATP9BO43861 1147 aa11.49□□□□□ -0.57
COPS7A-217ENST00000543537 TYROBPO43914 113 aa11.49□□□□□ -0.57
COPS7A-217ENST00000543537 SOCS5O75159 536 aa11.49□□□□□ -0.57
COPS7A-217ENST00000543537 PMPCBO75439 489 aa11.49□□□□□ -0.57
COPS7A-217ENST00000543537 CFIP05156 583 aa11.49□□□□□ -0.57
COPS7A-217ENST00000543537 CRABP2P29373 138 aa11.49□□□□□ -0.57
COPS7A-217ENST00000543537 ALDH3A1P30838 453 aa11.49□□□□□ -0.57
COPS7A-217ENST00000543537 SLC26A3P40879 764 aa11.49□□□□□ -0.57
COPS7A-217ENST00000543537 CD86P42081 329 aa11.49□□□□□ -0.57
COPS7A-217ENST00000543537 NOVA1P51513 510 aaKnown RBP11.49□□□□□ -0.57
COPS7A-217ENST00000543537 PRKAA2P54646 552 aa11.49□□□□□ -0.57
COPS7A-217ENST00000543537 ST8SIA6P61647 398 aa11.49□□□□□ -0.57
COPS7A-217ENST00000543537 ECT2LQ008S8 904 aa11.49□□□□□ -0.57
COPS7A-217ENST00000543537 GUCY1A3Q02108 690 aa11.49□□□□□ -0.57
COPS7A-217ENST00000543537 NIPAL4Q0D2K0 466 aa11.49□□□□□ -0.57
COPS7A-217ENST00000543537 C9orf64Q5T6V5 341 aa11.49□□□□□ -0.57
COPS7A-217ENST00000543537 ZDHHC20Q5W0Z9 365 aa11.49□□□□□ -0.57
COPS7A-217ENST00000543537 ZNF776Q68DI1 518 aaPredicted RBP11.49□□□□□ -0.57
COPS7A-217ENST00000543537 DENND5AQ6IQ26 1287 aa11.49□□□□□ -0.57
COPS7A-217ENST00000543537 CXorf57Q6NSI4 855 aaKnown RBP11.49□□□□□ -0.57
COPS7A-217ENST00000543537 MRNIPQ6NTE8 343 aa11.49□□□□□ -0.57
COPS7A-217ENST00000543537 PSAPL1Q6NUJ1 521 aa11.49□□□□□ -0.57
COPS7A-217ENST00000543537 CAPN12Q6ZSI9 719 aa11.49□□□□□ -0.57
COPS7A-217ENST00000543537 PRPF39Q86UA1 669 aaKnown RBP11.49□□□□□ -0.57
COPS7A-217ENST00000543537 KCNMB4Q86W47 210 aa11.49□□□□□ -0.57
COPS7A-217ENST00000543537 TP53INP2Q8IXH6 220 aa11.49□□□□□ -0.57
COPS7A-217ENST00000543537 KIRREL3Q8IZU9 778 aa11.49□□□□□ -0.57
COPS7A-217ENST00000543537 CFAP52Q8N1V2 620 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms