RNA–Protein interactions for RNA: ENST00000542922.5

SLC3A2-220, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 2,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-220ENST00000542922 NFKB2Q00653 900 aa13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 TRAF2Q12933 501 aa13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 ZNF177Q13360 481 aaPredicted RBP13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 PTK2BQ14289 1009 aa13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 DEFB115Q30KQ5 88 aa13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 USP41Q3LFD5 358 aa13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 REP15Q6BDI9 236 aa13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 PEX13Q92968 403 aa13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 MUC3BQ9H195 1237 aa13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 GMPR2Q9P2T1 348 aaKnown RBP13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 YIPF1Q9Y548 306 aa13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 RAI2Q9Y5P3 530 aa13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 DNAJC15Q9Y5T4 150 aa13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 PLXNA4Q9HCM2 1894 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 LAMA3Q16787 3333 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 E7ENX8 843 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 PSMD12O00232 456 aaPredicted RBP13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 PITPNM1O00562 1244 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 SMIM24O75264 130 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 TMCC1O94876 653 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 RALGDSQ12967 914 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 BTG3Q14201 252 aaPredicted RBP13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 SQLEQ14534 574 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 TSNQ15631 228 aaKnown RBP13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 ACBD5Q5T8D3 534 aaPredicted RBP13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 KIAA1841Q6NSI8 718 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 PAOXQ6QHF9 649 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 LAYNQ6UX15 382 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 LARP4Q71RC2 724 aaKnown RBP eCLIP13.64□□□□□ -0.234e-8■■■■□ 24.6
SLC3A2-220ENST00000542922 RNF168Q8IYW5 571 aaPredicted RBP13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 BBS5Q8N3I7 341 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 SLAIN1Q8ND83 568 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 WFDC5Q8TCV5 224 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 AUTS2Q8WXX7 1259 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 C19orf60Q96EN9 201 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 CCDC97Q96F63 343 aaPredicted RBP13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 IGSF21Q96ID5 467 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 FAR2Q96K12 515 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 SERPINI1Q99574 410 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 GPR21Q99679 349 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 KLF16Q9BXK1 252 aaPredicted RBP13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 MID1IP1Q9NPA3 183 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 VPS28Q9UK41 221 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 A0A1B0GVM2 712 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 ILVBLA1L0T0 632 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 NPEPPSL1A6NEC2 478 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 HOXA2O43364 376 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 NIPSNAP2O75323 286 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 SRP72O76094 671 aaKnown RBP13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 PRAMEF12O95522 483 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 CRTAMO95727 393 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 ZCCHC18P0CG32 403 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 TUFMP49411 452 aaKnown RBP13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 PSME3P61289 254 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 ZXDBP98169 803 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 ECT2LQ008S8 904 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 GALNT1Q10472 559 aaPredicted RBP13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 TAF1AQ15573 450 aaPredicted RBP13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 ADGRF1Q5T601 910 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 OR52E8Q6IFG1 317 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 FAM117BQ6P1L5 589 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 AFTPHQ6ULP2 937 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 LILRA2Q8N149 483 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 TRPC4APQ8TEL6 797 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 PLD4Q96BZ4 506 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 BIRC8Q96P09 236 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 TUBGCP5Q96RT8 1024 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 CDK5RAP1Q96SZ6 601 aaKnown RBP13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 SLC39A3Q9BRY0 314 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 KLHL4Q9C0H6 718 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 PCDHAC1Q9H158 963 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 HIPK3Q9H422 1215 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 TUBB1Q9H4B7 451 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 CACNA2D2Q9NY47 1150 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 ADA2Q9NZK5 511 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 TRPM5Q9NZQ8 1165 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 AFF4Q9UHB7 1163 aaKnown RBP13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 BTRCQ9Y297 605 aa13.64□□□□□ -0.23
SLC3A2-220ENST00000542922 NCF1BA6NI72 391 aaPredicted RBP13.63□□□□□ -0.23
SLC3A2-220ENST00000542922 NCF1CA8MVU1 366 aaPredicted RBP13.63□□□□□ -0.23
SLC3A2-220ENST00000542922 SUPT3HB4E1H0 165 aa13.63□□□□□ -0.23
SLC3A2-220ENST00000542922 ACOT8O14734 319 aa13.63□□□□□ -0.23
SLC3A2-220ENST00000542922 PIP5K1BO14986 540 aa13.63□□□□□ -0.23
SLC3A2-220ENST00000542922 SUPT3HO75486 399 aa13.63□□□□□ -0.23
SLC3A2-220ENST00000542922 SNUPNO95149 360 aaKnown RBP13.63□□□□□ -0.23
SLC3A2-220ENST00000542922 C1RP00736 705 aa13.63□□□□□ -0.23
SLC3A2-220ENST00000542922 GFAPP14136 432 aa13.63□□□□□ -0.23
SLC3A2-220ENST00000542922 NCF1P14598 390 aaPredicted RBP13.63□□□□□ -0.23
SLC3A2-220ENST00000542922 ME2P23368 584 aa13.63□□□□□ -0.23
SLC3A2-220ENST00000542922 EEF1DP29692 281 aaKnown RBP13.63□□□□□ -0.23
SLC3A2-220ENST00000542922 AGTR2P50052 363 aa13.63□□□□□ -0.23
SLC3A2-220ENST00000542922 LRP8Q14114 963 aa13.63□□□□□ -0.23
SLC3A2-220ENST00000542922 GRB7Q14451 532 aa13.63□□□□□ -0.23
SLC3A2-220ENST00000542922 RFTN1Q14699 578 aaPredicted RBP13.63□□□□□ -0.23
SLC3A2-220ENST00000542922 PTPRNQ16849 979 aa13.63□□□□□ -0.23
SLC3A2-220ENST00000542922 GRAMD1BQ3KR37 738 aa13.63□□□□□ -0.23
SLC3A2-220ENST00000542922 ATXN7L2Q5T6C5 722 aaPredicted RBP13.63□□□□□ -0.23
SLC3A2-220ENST00000542922 TMEM150AQ86TG1 271 aa13.63□□□□□ -0.23
SLC3A2-220ENST00000542922 PQLC1Q8N2U9 271 aa13.63□□□□□ -0.23
SLC3A2-220ENST00000542922 AFAP1L2Q8N4X5 818 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms