RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 NUMA1Q14980 2115 aa23.03■■□□□ 1.28
HOMER3-205ENST00000542541 H7C0S8 307 aa23.03■■□□□ 1.28
HOMER3-205ENST00000542541 SLC31A1O15431 190 aa23.03■■□□□ 1.28
HOMER3-205ENST00000542541 HRO43593 1189 aa23.03■■□□□ 1.28
HOMER3-205ENST00000542541 PRAMEP78395 509 aa23.03■■□□□ 1.28
HOMER3-205ENST00000542541 TMPRSS15P98073 1019 aa23.03■■□□□ 1.28
HOMER3-205ENST00000542541 DPTQ07507 201 aa23.03■■□□□ 1.28
HOMER3-205ENST00000542541 NAA30Q147X3 362 aaPredicted RBP23.03■■□□□ 1.28
HOMER3-205ENST00000542541 ELF2Q15723 593 aa23.03■■□□□ 1.28
HOMER3-205ENST00000542541 SPANXN3Q5MJ09 141 aa23.03■■□□□ 1.28
HOMER3-205ENST00000542541 ESRP1Q6NXG1 681 aaKnown RBP23.03■■□□□ 1.28
HOMER3-205ENST00000542541 CEP68Q76N32 757 aa23.03■■□□□ 1.28
HOMER3-205ENST00000542541 DENND6BQ8NEG7 585 aa23.03■■□□□ 1.28
HOMER3-205ENST00000542541 OR13J1Q8NGT2 312 aa23.03■■□□□ 1.28
HOMER3-205ENST00000542541 ZNF669Q96BR6 464 aaPredicted RBP23.03■■□□□ 1.28
HOMER3-205ENST00000542541 IL26Q9NPH9 171 aa23.03■■□□□ 1.28
HOMER3-205ENST00000542541 SLC2A6Q9UGQ3 507 aa23.03■■□□□ 1.28
HOMER3-205ENST00000542541 CD84Q9UIB8 345 aa23.03■■□□□ 1.28
HOMER3-205ENST00000542541 FAM169AQ9Y6X4 670 aa23.03■■□□□ 1.28
HOMER3-205ENST00000542541 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.02■■□□□ 1.28
HOMER3-205ENST00000542541 GLYATL1P3A0A0U1RQE8 302 aa23.02■■□□□ 1.28
HOMER3-205ENST00000542541 MEI4A8MW99 385 aa23.02■■□□□ 1.28
HOMER3-205ENST00000542541 PYGLP06737 847 aa23.02■■□□□ 1.28
HOMER3-205ENST00000542541 FGL2Q14314 439 aa23.02■■□□□ 1.28
HOMER3-205ENST00000542541 FASTKD3Q14CZ7 662 aaKnown RBP23.02■■□□□ 1.28
HOMER3-205ENST00000542541 CES3Q6UWW8 571 aa23.02■■□□□ 1.28
HOMER3-205ENST00000542541 RFLNAQ6ZTI6 216 aa23.02■■□□□ 1.28
HOMER3-205ENST00000542541 TMEFF1Q8IYR6 380 aa23.02■■□□□ 1.28
HOMER3-205ENST00000542541 FKBPLQ9UIM3 349 aa23.02■■□□□ 1.28
HOMER3-205ENST00000542541 A0A1W2PPC4 97 aa23.01■■□□□ 1.27
HOMER3-205ENST00000542541 CTIFO43310 598 aaKnown RBP23.01■■□□□ 1.27
HOMER3-205ENST00000542541 GSTA2P09210 222 aa23.01■■□□□ 1.27
HOMER3-205ENST00000542541 MYBL2P10244 700 aa23.01■■□□□ 1.27
HOMER3-205ENST00000542541 HNRNPA2B1P22626 353 aaKnown RBP23.01■■□□□ 1.27
HOMER3-205ENST00000542541 AKT2P31751 481 aa23.01■■□□□ 1.27
HOMER3-205ENST00000542541 WDR45BQ5MNZ6 344 aa23.01■■□□□ 1.27
HOMER3-205ENST00000542541 KIAA0930Q6ICG6 404 aaPredicted RBP23.01■■□□□ 1.27
HOMER3-205ENST00000542541 DEFB119Q8N690 84 aa23.01■■□□□ 1.27
HOMER3-205ENST00000542541 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.01■■□□□ 1.27
HOMER3-205ENST00000542541 OR6P1Q8NGX9 317 aa23.01■■□□□ 1.27
HOMER3-205ENST00000542541 SNX19Q92543 992 aa23.01■■□□□ 1.27
HOMER3-205ENST00000542541 SCAMP4Q969E2 229 aa23.01■■□□□ 1.27
HOMER3-205ENST00000542541 HDAC10Q969S8 669 aa23.01■■□□□ 1.27
HOMER3-205ENST00000542541 CENPTQ96BT3 561 aa23.01■■□□□ 1.27
HOMER3-205ENST00000542541 CFAP36Q96G28 342 aa23.01■■□□□ 1.27
HOMER3-205ENST00000542541 TBATAQ96M53 351 aa23.01■■□□□ 1.27
HOMER3-205ENST00000542541 HSPA12BQ96MM6 686 aa23.01■■□□□ 1.27
HOMER3-205ENST00000542541 WDR83Q9BRX9 315 aaKnown RBP23.01■■□□□ 1.27
HOMER3-205ENST00000542541 ZSCAN5AQ9BUG6 496 aa23.01■■□□□ 1.27
HOMER3-205ENST00000542541 RIOK2Q9BVS4 552 aaKnown RBP23.01■■□□□ 1.27
HOMER3-205ENST00000542541 FNDC3AQ9Y2H6 1198 aaKnown RBP23.01■■□□□ 1.27
HOMER3-205ENST00000542541 PRAMEF26H0Y7S4 382 aa23■■□□□ 1.27
HOMER3-205ENST00000542541 LILRB5O75023 590 aa23■■□□□ 1.27
HOMER3-205ENST00000542541 RHOBTB1O94844 696 aa23■■□□□ 1.27
HOMER3-205ENST00000542541 CD27P26842 260 aa23■■□□□ 1.27
HOMER3-205ENST00000542541 SRSF5Q13243 272 aaKnown RBP23■■□□□ 1.27
HOMER3-205ENST00000542541 CRYMQ14894 314 aa23■■□□□ 1.27
HOMER3-205ENST00000542541 WSCD2Q2TBF2 565 aa23■■□□□ 1.27
HOMER3-205ENST00000542541 HENMT1Q5T8I9 393 aaKnown RBP23■■□□□ 1.27
HOMER3-205ENST00000542541 ALS2CLQ60I27 953 aa23■■□□□ 1.27
HOMER3-205ENST00000542541 ZC3H14Q6PJT7 736 aaKnown RBP23■■□□□ 1.27
HOMER3-205ENST00000542541 UNC5AQ6ZN44 842 aa23■■□□□ 1.27
HOMER3-205ENST00000542541 TRAM1L1Q8N609 369 aa23■■□□□ 1.27
HOMER3-205ENST00000542541 C9orf72Q96LT7 481 aa23■■□□□ 1.27
HOMER3-205ENST00000542541 TTC25Q96NG3 672 aa23■■□□□ 1.27
HOMER3-205ENST00000542541 FCRL3Q96P31 734 aaPredicted RBP23■■□□□ 1.27
HOMER3-205ENST00000542541 SPATA16Q9BXB7 569 aa23■■□□□ 1.27
HOMER3-205ENST00000542541 SLC30A1Q9Y6M5 507 aa23■■□□□ 1.27
HOMER3-205ENST00000542541 TRPM6Q9BX84 2022 aa23■■□□□ 1.27
HOMER3-205ENST00000542541 ZCWPW2A0A1B0GU75 182 aa23■■□□□ 1.27
HOMER3-205ENST00000542541 FPGTO14772 594 aa23■■□□□ 1.27
HOMER3-205ENST00000542541 VAPBO95292 243 aa23■■□□□ 1.27
HOMER3-205ENST00000542541 FAM153BP0C7A2 387 aa23■■□□□ 1.27
HOMER3-205ENST00000542541 TSHRP16473 764 aa23■■□□□ 1.27
HOMER3-205ENST00000542541 ARSDP51689 593 aa23■■□□□ 1.27
HOMER3-205ENST00000542541 ITGA9Q13797 1035 aa23■■□□□ 1.27
HOMER3-205ENST00000542541 LONRF1Q17RB8 773 aa23■■□□□ 1.27
HOMER3-205ENST00000542541 FAM153CQ494X1 144 aa23■■□□□ 1.27
HOMER3-205ENST00000542541 STEAP4Q687X5 459 aa23■■□□□ 1.27
HOMER3-205ENST00000542541 PMS2CLQ68D20 193 aa23■■□□□ 1.27
HOMER3-205ENST00000542541 PDPK2PQ6A1A2 396 aa23■■□□□ 1.27
HOMER3-205ENST00000542541 AFTPHQ6ULP2 937 aa23■■□□□ 1.27
HOMER3-205ENST00000542541 FAM151BQ6UXP7 276 aa23■■□□□ 1.27
HOMER3-205ENST00000542541 GSPT2Q8IYD1 628 aaKnown RBP23■■□□□ 1.27
HOMER3-205ENST00000542541 TP53I13Q8NBR0 393 aaPredicted RBP23■■□□□ 1.27
HOMER3-205ENST00000542541 SGSM3Q96HU1 749 aa23■■□□□ 1.27
HOMER3-205ENST00000542541 ZC3H10Q96K80 434 aaKnown RBP23■■□□□ 1.27
HOMER3-205ENST00000542541 KLF6Q99612 283 aaPredicted RBP23■■□□□ 1.27
HOMER3-205ENST00000542541 TRIM56Q9BRZ2 755 aaKnown RBP23■■□□□ 1.27
HOMER3-205ENST00000542541 HS3ST3A1Q9Y663 406 aa23■■□□□ 1.27
HOMER3-205ENST00000542541 EML5Q05BV3 1969 aa23■■□□□ 1.27
HOMER3-205ENST00000542541 PLXND1Q9Y4D7 1925 aa23■■□□□ 1.27
HOMER3-205ENST00000542541 CCL22O00626 93 aa22.99■■□□□ 1.27
HOMER3-205ENST00000542541 SPAG6O75602 509 aa22.99■■□□□ 1.27
HOMER3-205ENST00000542541 SRP72O76094 671 aaKnown RBP22.99■■□□□ 1.27
HOMER3-205ENST00000542541 PRAMEF1O95521 474 aa22.99■■□□□ 1.27
HOMER3-205ENST00000542541 ITGALP20701 1170 aa22.99■■□□□ 1.27
HOMER3-205ENST00000542541 MC4RP32245 332 aa22.99■■□□□ 1.27
HOMER3-205ENST00000542541 XIAPP98170 497 aa22.99■■□□□ 1.27
HOMER3-205ENST00000542541 SIM2Q14190 667 aaPredicted RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms